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The map label for this gene is yxaD [H]

Identifier: 119715021

GI number: 119715021

Start: 817767

End: 818234

Strand: Direct

Name: yxaD [H]

Synonym: Noca_0774

Alternate gene names: 119715021

Gene position: 817767-818234 (Clockwise)

Preceding gene: 119715020

Following gene: 119715024

Centisome position: 16.4

GC content: 73.5

Gene sequence:

>468_bases
GTGACCAGTCCGCGCACCGACCTGCTCCGCGGGCTCGAGCAGGAGGTCGGCGTGATGGTCCGCCGGATCCGGCGGGTGAT
CCGGAAGCGGGCGCACGCCGTGCACCCCGAGCTGCCCTCGTCGTCGTACCTCATGCTGTCCTGGCTGCTCGCCCACGGCC
CGCAGCGCTCCTCGGCGATGTCCGAGGCGTTCGGCATCGACAAGGGCGCGATCAGCCGCCAGCTCCAGCACCTCGTCGAC
CTCGACCTCGTCGACCGCAGCCCCGACCCCGACGACGGCCGCGCCACGCTGGTCTCGGCGTCCGCGACCGCCGTCGGCCG
GATGTCGGCCGTCGCGGACGAGCGGCGCCGCTGGCTCGACGAGCGGCTCGGTGACTGGTCCGCGGACGAGCTCACCTCGT
TCGTCGACCTGCTGCGCCGCTACAACGCGGCCCTCGACGAGCACCCGGACGCGCTCGCTGTCGACTGA

Upstream 100 bases:

>100_bases
CTGCGCACGTCCAACCTCGAGGCCGAGGCCGCGGCCTCCCCGGAGGTCGCGGCGGAGCTGCACCGTGCGATCGTGAGGAA
GTGAGGTGACCGTGGCGAGC

Downstream 100 bases:

>100_bases
GCAGGTCGTCCGGGGCGGGGCCGGCGGTGCGTCAGCAACCGTCTGCGGCTCGGATCAGGTTGCCTGGACACCGCTCGCCC
GGGCCGACCCGCGAGCGTCA

Product: regulatory protein MarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTSPRTDLLRGLEQEVGVMVRRIRRVIRKRAHAVHPELPSSSYLMLSWLLAHGPQRSSAMSEAFGIDKGAISRQLQHLVD
LDLVDRSPDPDDGRATLVSASATAVGRMSAVADERRRWLDERLGDWSADELTSFVDLLRRYNAALDEHPDALAVD

Sequences:

>Translated_155_residues
MTSPRTDLLRGLEQEVGVMVRRIRRVIRKRAHAVHPELPSSSYLMLSWLLAHGPQRSSAMSEAFGIDKGAISRQLQHLVD
LDLVDRSPDPDDGRATLVSASATAVGRMSAVADERRRWLDERLGDWSADELTSFVDLLRRYNAALDEHPDALAVD
>Mature_154_residues
TSPRTDLLRGLEQEVGVMVRRIRRVIRKRAHAVHPELPSSSYLMLSWLLAHGPQRSSAMSEAFGIDKGAISRQLQHLVDL
DLVDRSPDPDDGRATLVSASATAVGRMSAVADERRRWLDERLGDWSADELTSFVDLLRRYNAALDEHPDALAVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17326; Mature: 17195

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPRTDLLRGLEQEVGVMVRRIRRVIRKRAHAVHPELPSSSYLMLSWLLAHGPQRSSAM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH
SEAFGIDKGAISRQLQHLVDLDLVDRSPDPDDGRATLVSASATAVGRMSAVADERRRWLD
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
ERLGDWSADELTSFVDLLRRYNAALDEHPDALAVD
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TSPRTDLLRGLEQEVGVMVRRIRRVIRKRAHAVHPELPSSSYLMLSWLLAHGPQRSSAM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHH
SEAFGIDKGAISRQLQHLVDLDLVDRSPDPDDGRATLVSASATAVGRMSAVADERRRWLD
HHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH
ERLGDWSADELTSFVDLLRRYNAALDEHPDALAVD
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]