| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715015
Identifier: 119715015
GI number: 119715015
Start: 812411
End: 812932
Strand: Direct
Name: 119715015
Synonym: Noca_0768
Alternate gene names: NA
Gene position: 812411-812932 (Clockwise)
Preceding gene: 119714984
Following gene: 119715016
Centisome position: 16.29
GC content: 72.03
Gene sequence:
>522_bases ATGAGAAGGGTCGGATGCAACCCCCCACCTGACAGGAGCGGCATCGTGGAGAAGCTGACGTGGGTCCTCTGGAAGGAGCG CGAGCTCCTGGAGGGTCTGCTCTTCCGGCTCGAGACGGAGGCGCTGGTGATGTCCAGCGGGCGTACCCGATGGCTACCGG CCGCGGCTCGCGACGTCGAGGAGGCGGCCCGGCAGGTCCGGGAGATGGAGCTGTTGCGTGCCGTGGCGGCCGACGAGGCC GCGGCCGGTGTCGGGCTCGAGCCGAACCCGAGCCTGCGCGCCTTGGTCGCGGCCGCCGACGAGCCGTGGGCCTCGATCCT GGCCGAGCACCGCGAGGCGTTCTCGGTCCTCAGCGACGAGATCGTCCGCGCCGCGGACGTCAACCGCAGCCTGATCTCCG CCGGTCTCCGGGCCGCGCACGAGACGCTGCTGGACCTCGACACCAGCGTGACGACGTACACCGCCGCCGGCGCGGTCGCC GTCGGAGCCGGAGTGCCGTCCTTCGTCGACCGGAGCCTGTGA
Upstream 100 bases:
>100_bases AGCGACACGCCGAGAATCTGGGTGGATTCCGTCCGCAAAGCTCGATCCGAGCGCCGGCGCGAAGTCCGCAGAACCCCTCA GCATGGGCTCGCGGTGTCCG
Downstream 100 bases:
>100_bases CGTGGCGGGCTCCTTCTCCTCGATCAACACCGCGCTGACCGCGCTGCGCTACCAGCAGGTCGCGCTCGACGTCGCGAGCA CCAACGTCGCGAACGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRRVGCNPPPDRSGIVEKLTWVLWKERELLEGLLFRLETEALVMSSGRTRWLPAAARDVEEAARQVREMELLRAVAADEA AAGVGLEPNPSLRALVAAADEPWASILAEHREAFSVLSDEIVRAADVNRSLISAGLRAAHETLLDLDTSVTTYTAAGAVA VGAGVPSFVDRSL
Sequences:
>Translated_173_residues MRRVGCNPPPDRSGIVEKLTWVLWKERELLEGLLFRLETEALVMSSGRTRWLPAAARDVEEAARQVREMELLRAVAADEA AAGVGLEPNPSLRALVAAADEPWASILAEHREAFSVLSDEIVRAADVNRSLISAGLRAAHETLLDLDTSVTTYTAAGAVA VGAGVPSFVDRSL >Mature_173_residues MRRVGCNPPPDRSGIVEKLTWVLWKERELLEGLLFRLETEALVMSSGRTRWLPAAARDVEEAARQVREMELLRAVAADEA AAGVGLEPNPSLRALVAAADEPWASILAEHREAFSVLSDEIVRAADVNRSLISAGLRAAHETLLDLDTSVTTYTAAGAVA VGAGVPSFVDRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18641; Mature: 18641
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVGCNPPPDRSGIVEKLTWVLWKERELLEGLLFRLETEALVMSSGRTRWLPAAARDVE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH EAARQVREMELLRAVAADEAAAGVGLEPNPSLRALVAAADEPWASILAEHREAFSVLSDE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IVRAADVNRSLISAGLRAAHETLLDLDTSVTTYTAAGAVAVGAGVPSFVDRSL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MRRVGCNPPPDRSGIVEKLTWVLWKERELLEGLLFRLETEALVMSSGRTRWLPAAARDVE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH EAARQVREMELLRAVAADEAAAGVGLEPNPSLRALVAAADEPWASILAEHREAFSVLSDE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IVRAADVNRSLISAGLRAAHETLLDLDTSVTTYTAAGAVAVGAGVPSFVDRSL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA