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The map label for this gene is yrbE [C]

Identifier: 119714949

GI number: 119714949

Start: 740019

End: 740846

Strand: Direct

Name: yrbE [C]

Synonym: Noca_0702

Alternate gene names: 119714949

Gene position: 740019-740846 (Clockwise)

Preceding gene: 119714948

Following gene: 119714950

Centisome position: 14.84

GC content: 67.87

Gene sequence:

>828_bases
ATGGCCAGCATCCGTGCGGTCTACGTGAAGCCGCTGAAGACCCTCGACAGCCTCGGTGAAGAGCTCGCGTTCTTCATCAA
GGCCCTCGCGTGGACGCCGCGCGCGATCCGGCGCTACAAGAAGGAGATCCTCCGCATCCTCGCGGAGGTGACCCTCGGCA
GCGGCGCGCTGGCCGTGATCGGCGGCACCGTCGGCGTGATCCTCGCGATGACCTTCTTCACCGGCGCCCAGGTCGGGCTG
TCCGGCTACGCCGCGCTCGACCAGCTCGGCACCGCGGCGTTCGCAGGCTTCATCTCGGCGTACTTCAACACCCGTGAGAT
CGCACCCCTGGTCTCGGGCATCGCCCTGGCCGCCACCGTCGGGTGCGGATTCACGGCCCAGCTGGGCTCGATGCGCATCT
CGGAGGAGGTGGACGCCCTCGAGGTGATGGCGATCCCCTCGCTGCCGTTCCTGGTCACGACGCGCATCGTCGGCGGCCTG
ATCGCGATCATCCCGCTGTACGTCGTGGGCCTGCTCGCGTCGTACTTCGCCACCCGGCTCACCGTCACCCAGTTCTTCGG
GCAGTCGGCCGGCACCTACGACCACTACTTCAACTCGTTCCTACCACCCGGCGACGTGCTGTGGTCCTTCGGCAAGGTCC
TGGTCTTCGCGGTCACGGTGATCCTGATCCACTGCTACCACGGCTACACCGCCTCGGGCGGTCCGGCCGGGGTGGGTGTC
GCCGTGGGCCGTGCCGTGCGCACGAGCATCGTCGCGATCAACGTGATCGACCTGTTCTTGTCGATGGCCATCTGGGGCGC
GTCGACCACCGTCAGGCTGGCGGGGTGA

Upstream 100 bases:

>100_bases
CGAGTCGGTCGTGGTCACCTTCATCCTTCTGTTCATCGTCAACTTCGTGATGAGTGCGATCTACATCCAGCTCGTCCCGC
CGAAGACCGGGTAGGGCGCC

Downstream 100 bases:

>100_bases
TCGCGTGCGGCTGATCGCTGGGCACAAGGTGCTGGGTGTGGTGTTCCTCTGCCTGCTGCTGGCGGGCGGCTACCTGACCT
ACGCCGTCTTCAGCAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MASIRAVYVKPLKTLDSLGEELAFFIKALAWTPRAIRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMTFFTGAQVGL
SGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCGFTAQLGSMRISEEVDALEVMAIPSLPFLVTTRIVGGL
IAIIPLYVVGLLASYFATRLTVTQFFGQSAGTYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGV
AVGRAVRTSIVAINVIDLFLSMAIWGASTTVRLAG

Sequences:

>Translated_275_residues
MASIRAVYVKPLKTLDSLGEELAFFIKALAWTPRAIRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMTFFTGAQVGL
SGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCGFTAQLGSMRISEEVDALEVMAIPSLPFLVTTRIVGGL
IAIIPLYVVGLLASYFATRLTVTQFFGQSAGTYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGV
AVGRAVRTSIVAINVIDLFLSMAIWGASTTVRLAG
>Mature_274_residues
ASIRAVYVKPLKTLDSLGEELAFFIKALAWTPRAIRRYKKEILRILAEVTLGSGALAVIGGTVGVILAMTFFTGAQVGLS
GYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATVGCGFTAQLGSMRISEEVDALEVMAIPSLPFLVTTRIVGGLI
AIIPLYVVGLLASYFATRLTVTQFFGQSAGTYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGVA
VGRAVRTSIVAINVIDLFLSMAIWGASTTVRLAG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=27.1317829457364, Blast_Score=78, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28926; Mature: 28795

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
ASIRAVYVKPLKTLDSLGEELAFFIKALAWTPRAIRRYKKEILRILAEVTLGSGALAVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
GGTVGVILAMTFFTGAQVGLSGYAALDQLGTAAFAGFISAYFNTREIAPLVSGIALAATV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
GCGFTAQLGSMRISEEVDALEVMAIPSLPFLVTTRIVGGLIAIIPLYVVGLLASYFATRL
CCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVTQFFGQSAGTYDHYFNSFLPPGDVLWSFGKVLVFAVTVILIHCYHGYTASGGPAGVGV
HHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
AVGRAVRTSIVAINVIDLFLSMAIWGASTTVRLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA