| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119714918
Identifier: 119714918
GI number: 119714918
Start: 710748
End: 711149
Strand: Direct
Name: 119714918
Synonym: Noca_0670
Alternate gene names: NA
Gene position: 710748-711149 (Clockwise)
Preceding gene: 119714916
Following gene: 119714919
Centisome position: 14.26
GC content: 71.64
Gene sequence:
>402_bases ATGCCTGTCGACCAGTCGCTCGTCGGCCGGGTGTTCCCACCCACCCGACCCTATGCGGTCACCGAGGAGCACGTCCGGAG CTTCGTGGCCGCCACCGGCGGCGCGTACGACGGCGGCCCGGCGCCCACGACGTACCCGATCGTCCTCGCGTTCGAGGCGA TGAACGCCTTCCTCGAGGCGGAGGCGATCGAGCTGCACCGGATCGTGCACGGCGAGCAGCGGTTCGCCTACGAGCGCCCG GTCGTCCCCGGGGACGTGCTCACCGCGACACTGACCGTGAGCAGCCTGCGCCAGATCGCCGGCAACGACATCATCGGCAC CACCAGCGAGGTCACCGACGAGGCGGGCGCGCTGGTCTGCTCGACCAGCGCCACCCTGGTGCATCGGGGGGCCGGGGCAT GA
Upstream 100 bases:
>100_bases TCGTGGTCCGGGAACGGGAGCCTCGACCCGGTGCATCCGGCGCCGGCCGCCAGGGCGAGCGCCAGCACGACGCCGACGAG CCACCGGCTAGGTTGACGCC
Downstream 100 bases:
>100_bases GTGCCGGGAGCCTGCCGGCCCGGACCTTCACCGTCACCCGCGCCGACCTGGTCGCGTACGCCGAGGCGAGCGGCGACCAC AACCCGATCCACCAGGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPVDQSLVGRVFPPTRPYAVTEEHVRSFVAATGGAYDGGPAPTTYPIVLAFEAMNAFLEAEAIELHRIVHGEQRFAYERP VVPGDVLTATLTVSSLRQIAGNDIIGTTSEVTDEAGALVCSTSATLVHRGAGA
Sequences:
>Translated_133_residues MPVDQSLVGRVFPPTRPYAVTEEHVRSFVAATGGAYDGGPAPTTYPIVLAFEAMNAFLEAEAIELHRIVHGEQRFAYERP VVPGDVLTATLTVSSLRQIAGNDIIGTTSEVTDEAGALVCSTSATLVHRGAGA >Mature_132_residues PVDQSLVGRVFPPTRPYAVTEEHVRSFVAATGGAYDGGPAPTTYPIVLAFEAMNAFLEAEAIELHRIVHGEQRFAYERPV VPGDVLTATLTVSSLRQIAGNDIIGTTSEVTDEAGALVCSTSATLVHRGAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0336 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002539 - InterPro: IPR016709 [H]
Pfam domain/function: PF01575 MaoC_dehydratas [H]
EC number: NA
Molecular weight: Translated: 13996; Mature: 13865
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVDQSLVGRVFPPTRPYAVTEEHVRSFVAATGGAYDGGPAPTTYPIVLAFEAMNAFLEA CCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EAIELHRIVHGEQRFAYERPVVPGDVLTATLTVSSLRQIAGNDIIGTTSEVTDEAGALVC HHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEE STSATLVHRGAGA ECCHHEEECCCCC >Mature Secondary Structure PVDQSLVGRVFPPTRPYAVTEEHVRSFVAATGGAYDGGPAPTTYPIVLAFEAMNAFLEA CCCCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH EAIELHRIVHGEQRFAYERPVVPGDVLTATLTVSSLRQIAGNDIIGTTSEVTDEAGALVC HHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEE STSATLVHRGAGA ECCHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]