| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714834
Identifier: 119714834
GI number: 119714834
Start: 599689
End: 600102
Strand: Reverse
Name: 119714834
Synonym: Noca_0570
Alternate gene names: NA
Gene position: 600102-599689 (Counterclockwise)
Preceding gene: 119714838
Following gene: 119714833
Centisome position: 12.04
GC content: 65.94
Gene sequence:
>414_bases ATGTCGATGCCCACGCAGATGAGCCTGGTCGGGTTCATCGCCTCCGCACCCGAACTGCACTTCACCAAGGCCGGCGCCGA ATGCTGTCGCATGCGCGTCGGCATCGAGCAGTGGCGCAAGGAAGTCGACGGCAGCTTCACGAAGCTCGACCCCACCTTCC ACGACATGGTCGCCTTCGAGAGCACCGCCCGCGAGACCTACGCACGCTTCCGCAAGGGCGACTCGTTCGTGGCCAGCGGC TACGTCCACGAGTACGAGGTGGACGGCCGCGAGGGCAGCGTCATCAAGGAGGAGTTCGTCGCCCGCAAGATCGGTCACAA CGTCAGCAAGACCGACTACGTCGTCCAGCGCGGTCGGCACGCTGCTGACCGGTCCCTGACATCCGTGCCACAGCCGCCCG CCGTTGGCCTCTGA
Upstream 100 bases:
>100_bases CTGGGGCGCTTCATGGTGCACTGCGACCCTTTGGTCGCCCACACGCACCTTAATTCCTGAAGCGGCGCCAACCGGACGCC GCCCGAATGCAGGAGTCAGG
Downstream 100 bases:
>100_bases TCGGACTCGCCATGAGTCCGTACCCGGACGAGCCCGACGACCCTGACGGCTACCGCAGCGTGACGGAGCTCCTGGAGCGA CCGCCGGTTCCGATCAACTG
Product: single-strand binding protein/primosomal replication protein n
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSMPTQMSLVGFIASAPELHFTKAGAECCRMRVGIEQWRKEVDGSFTKLDPTFHDMVAFESTARETYARFRKGDSFVASG YVHEYEVDGREGSVIKEEFVARKIGHNVSKTDYVVQRGRHAADRSLTSVPQPPAVGL
Sequences:
>Translated_137_residues MSMPTQMSLVGFIASAPELHFTKAGAECCRMRVGIEQWRKEVDGSFTKLDPTFHDMVAFESTARETYARFRKGDSFVASG YVHEYEVDGREGSVIKEEFVARKIGHNVSKTDYVVQRGRHAADRSLTSVPQPPAVGL >Mature_136_residues SMPTQMSLVGFIASAPELHFTKAGAECCRMRVGIEQWRKEVDGSFTKLDPTFHDMVAFESTARETYARFRKGDSFVASGY VHEYEVDGREGSVIKEEFVARKIGHNVSKTDYVVQRGRHAADRSLTSVPQPPAVGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15286; Mature: 15155
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS50935 SSB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPTQMSLVGFIASAPELHFTKAGAECCRMRVGIEQWRKEVDGSFTKLDPTFHDMVAFE CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHH STARETYARFRKGDSFVASGYVHEYEVDGREGSVIKEEFVARKIGHNVSKTDYVVQRGRH HHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC AADRSLTSVPQPPAVGL HHHHHHHCCCCCCCCCC >Mature Secondary Structure SMPTQMSLVGFIASAPELHFTKAGAECCRMRVGIEQWRKEVDGSFTKLDPTFHDMVAFE CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHH STARETYARFRKGDSFVASGYVHEYEVDGREGSVIKEEFVARKIGHNVSKTDYVVQRGRH HHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCC AADRSLTSVPQPPAVGL HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA