| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714831
Identifier: 119714831
GI number: 119714831
Start: 597415
End: 598725
Strand: Reverse
Name: 119714831
Synonym: Noca_0567
Alternate gene names: NA
Gene position: 598725-597415 (Counterclockwise)
Preceding gene: 119714832
Following gene: 119714830
Centisome position: 12.01
GC content: 68.34
Gene sequence:
>1311_bases ATGTACGGCGAGAACGGTGCCCAGATGCGCACGGAGTTGGCGGCGCTCCTGCGCCAGCACCGGGTGATGCACCGGCTCGC CGCAGACTCGCCGACCGAGCGGGCTGAGGTCGGACAACAGATCCTGCGCTACCGTCGCACGCTCCTCACCTGGTGCGTGC AAGCCATCCGTGTCGCACAGCCGCTGACGTTCCCGAACATCCCGCTGAAGCCGGCGGATCCCTTCCGCGCGACGAGCGAT CATGGCGCGGCAGTGAGCGAACTGGTCCGAGCTCTCGAGCTCGCTCGCGATCAGGCAGCGACGACGGCCGCGTCCAGTAC GGCACTCGCGACGCCGAGCTTGAACGACGTGGTCGAGCACTGGCGCCTGGCAGCAAGGGCCGCAGCCCTCGCCGAGCACG ACACCGCGCCCGACGTATCCGTTCAACTCACGGGAGCCCAAGCGCGAACAATCGCAGGCGACGTCGCGGCGATCAGCCAA GCACTGGTCGTGCTCGATCGTCGGTACCGGAACACGCCCGACTGGGAGTCGCTCGCCGGCTGCGATCGACTCGGGTGGGC CGCACTCGCTACTGCGCTCGACGTCAGCCTCGGGCAGCCCGACTACAGCGTCGACCAGACCGGCTGGCGCCCACGGACCA AGCCGATCCGCGGACCGGCCAAGCCGGGAGTCCTCGGAGTGCTCCAGGCCGAGCACAACCTCCTGGTCCGGCTGAAGTCG CTTCCCAACGCCATCAACTTGCGCCTAATCGTCGACTCTCAGCGCCTGCTCACCTCACAGCTCATTCCTTACGCCGAACG GGTCGATCCCCCACTGGCCGAGCAATGGCGAGCCCGCACCGCGACGTACTCACGGATCCAGCGCGAGCTCCGCAACGTCG GGGGAAGACTCGGCAACGGCGCCGGCGCCACCGCAGAAGCCGCGAACGCGGTCAGCCGAATGAAGGCGTTGCCATCCGGA ACCGTGATCGAGCCGCGGATGCTCGGTGGCTTCCAGACGCTCTTCCGCCGCATCGACGAACGCATCAGCGATGTCCTCGA AGCCGGTGTCGAGCGCGGGGCATTCGTTCAGCGCGTGACCGTGCCGCGACTGGCGAGCGGCGAAGGACGGCTGGTCCACC CAGTTCGCGAGCGCTTCGTGCCAGTTGCCCACCCGAGCGACCTCGAAGTCGTCAGGACCATACGTGAGCACCTGCGGCCT CGGCCAGAGCCTGCCGCGGTGTCGCCGGGCGCGAGCCGGGTCGATCTCCATGCCGCCCTCATCCACCGTCCGCCCGCGAA GGGGACGCAGTTCGATGTCCCAGGTCTTTAG
Upstream 100 bases:
>100_bases GCAGCGCCGTAGAGGAGCTCGAGAACTACGGAGTCGACGCCCTGTCGGTCGAGCTGATCCTGGCGATGATCGTCGACGCA CACGATCTGGACATCGGCTG
Downstream 100 bases:
>100_bases TACGAAGGCGGTTTGTGTTCGGGCTCCCCCACCCCGCTCGAAGCGACGACCTCCCCGCACCCGTGCGGGAAGAACCCCCC GGTCGACCGAAACAGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MYGENGAQMRTELAALLRQHRVMHRLAADSPTERAEVGQQILRYRRTLLTWCVQAIRVAQPLTFPNIPLKPADPFRATSD HGAAVSELVRALELARDQAATTAASSTALATPSLNDVVEHWRLAARAAALAEHDTAPDVSVQLTGAQARTIAGDVAAISQ ALVVLDRRYRNTPDWESLAGCDRLGWAALATALDVSLGQPDYSVDQTGWRPRTKPIRGPAKPGVLGVLQAEHNLLVRLKS LPNAINLRLIVDSQRLLTSQLIPYAERVDPPLAEQWRARTATYSRIQRELRNVGGRLGNGAGATAEAANAVSRMKALPSG TVIEPRMLGGFQTLFRRIDERISDVLEAGVERGAFVQRVTVPRLASGEGRLVHPVRERFVPVAHPSDLEVVRTIREHLRP RPEPAAVSPGASRVDLHAALIHRPPAKGTQFDVPGL
Sequences:
>Translated_436_residues MYGENGAQMRTELAALLRQHRVMHRLAADSPTERAEVGQQILRYRRTLLTWCVQAIRVAQPLTFPNIPLKPADPFRATSD HGAAVSELVRALELARDQAATTAASSTALATPSLNDVVEHWRLAARAAALAEHDTAPDVSVQLTGAQARTIAGDVAAISQ ALVVLDRRYRNTPDWESLAGCDRLGWAALATALDVSLGQPDYSVDQTGWRPRTKPIRGPAKPGVLGVLQAEHNLLVRLKS LPNAINLRLIVDSQRLLTSQLIPYAERVDPPLAEQWRARTATYSRIQRELRNVGGRLGNGAGATAEAANAVSRMKALPSG TVIEPRMLGGFQTLFRRIDERISDVLEAGVERGAFVQRVTVPRLASGEGRLVHPVRERFVPVAHPSDLEVVRTIREHLRP RPEPAAVSPGASRVDLHAALIHRPPAKGTQFDVPGL >Mature_436_residues MYGENGAQMRTELAALLRQHRVMHRLAADSPTERAEVGQQILRYRRTLLTWCVQAIRVAQPLTFPNIPLKPADPFRATSD HGAAVSELVRALELARDQAATTAASSTALATPSLNDVVEHWRLAARAAALAEHDTAPDVSVQLTGAQARTIAGDVAAISQ ALVVLDRRYRNTPDWESLAGCDRLGWAALATALDVSLGQPDYSVDQTGWRPRTKPIRGPAKPGVLGVLQAEHNLLVRLKS LPNAINLRLIVDSQRLLTSQLIPYAERVDPPLAEQWRARTATYSRIQRELRNVGGRLGNGAGATAEAANAVSRMKALPSG TVIEPRMLGGFQTLFRRIDERISDVLEAGVERGAFVQRVTVPRLASGEGRLVHPVRERFVPVAHPSDLEVVRTIREHLRP RPEPAAVSPGASRVDLHAALIHRPPAKGTQFDVPGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47498; Mature: 47498
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGENGAQMRTELAALLRQHRVMHRLAADSPTERAEVGQQILRYRRTLLTWCVQAIRVAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLTFPNIPLKPADPFRATSDHGAAVSELVRALELARDQAATTAASSTALATPSLNDVVEH CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHH WRLAARAAALAEHDTAPDVSVQLTGAQARTIAGDVAAISQALVVLDRRYRNTPDWESLAG HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC CDRLGWAALATALDVSLGQPDYSVDQTGWRPRTKPIRGPAKPGVLGVLQAEHNLLVRLKS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH LPNAINLRLIVDSQRLLTSQLIPYAERVDPPLAEQWRARTATYSRIQRELRNVGGRLGNG CCCEEEEEEEECCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGATAEAANAVSRMKALPSGTVIEPRMLGGFQTLFRRIDERISDVLEAGVERGAFVQRVT CCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC VPRLASGEGRLVHPVRERFVPVAHPSDLEVVRTIREHLRPRPEPAAVSPGASRVDLHAAL CCCCCCCCCCEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH IHRPPAKGTQFDVPGL HCCCCCCCCCCCCCCC >Mature Secondary Structure MYGENGAQMRTELAALLRQHRVMHRLAADSPTERAEVGQQILRYRRTLLTWCVQAIRVAQ CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PLTFPNIPLKPADPFRATSDHGAAVSELVRALELARDQAATTAASSTALATPSLNDVVEH CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHH WRLAARAAALAEHDTAPDVSVQLTGAQARTIAGDVAAISQALVVLDRRYRNTPDWESLAG HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHC CDRLGWAALATALDVSLGQPDYSVDQTGWRPRTKPIRGPAKPGVLGVLQAEHNLLVRLKS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH LPNAINLRLIVDSQRLLTSQLIPYAERVDPPLAEQWRARTATYSRIQRELRNVGGRLGNG CCCEEEEEEEECCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AGATAEAANAVSRMKALPSGTVIEPRMLGGFQTLFRRIDERISDVLEAGVERGAFVQRVT CCCHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHC VPRLASGEGRLVHPVRERFVPVAHPSDLEVVRTIREHLRPRPEPAAVSPGASRVDLHAAL CCCCCCCCCCEECHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH IHRPPAKGTQFDVPGL HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA