| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714821
Identifier: 119714821
GI number: 119714821
Start: 589544
End: 589915
Strand: Reverse
Name: 119714821
Synonym: Noca_0557
Alternate gene names: NA
Gene position: 589915-589544 (Counterclockwise)
Preceding gene: 119714822
Following gene: 119714820
Centisome position: 11.83
GC content: 73.66
Gene sequence:
>372_bases GTGACCGTCCCCGCACCGCCGGATCTCGCGGCATGGTTCCGCCACCGTGACGGGTGCGCCGGTCCTGCCGTGTTCGTGAT CGAGCACGCCGATGGGCATCCCGGACTGGTGTGCCGTGGTTGCGGTCGCAGCGTGACCTTTCGCGGCGGCACCTTCGCGG ACGCGGCGCGCCGAGTGCTGCGCCGCTATGCGCACGAGGTCGCCCACGCGGCCGAGGACGCGCAGGCGAAGGCCCTCGCC GAGTGCATGGACTGCGGCGCTCCGCTGCCGGTGCATCGCATGGACCGGCCCGGCGTCCCACTCTGTGCTGCCGACCGGGT CCGGCGCGAGCAGCTGAAGCTCGCCCGGCGGGGGTCGAAGGGATCCCGGTGA
Upstream 100 bases:
>100_bases GTGGCGCGCCGTTCCAGGCATGCGAGAGCCTCCGCTCGATTCGCCGGGGCCCATGCTGCGACCACTGCGACCACGCTCGC CATCACCGAGGGGGCCAGTC
Downstream 100 bases:
>100_bases TGAGCACCGTCGATCACGGCCTCGGCCTGAATCTCGGCGACCTCGATCTGCTCGACGATGAGTTCGAGCACGCGGTGTGC CAGGTCTGCCAGCCAGCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTVPAPPDLAAWFRHRDGCAGPAVFVIEHADGHPGLVCRGCGRSVTFRGGTFADAARRVLRRYAHEVAHAAEDAQAKALA ECMDCGAPLPVHRMDRPGVPLCAADRVRREQLKLARRGSKGSR
Sequences:
>Translated_123_residues MTVPAPPDLAAWFRHRDGCAGPAVFVIEHADGHPGLVCRGCGRSVTFRGGTFADAARRVLRRYAHEVAHAAEDAQAKALA ECMDCGAPLPVHRMDRPGVPLCAADRVRREQLKLARRGSKGSR >Mature_122_residues TVPAPPDLAAWFRHRDGCAGPAVFVIEHADGHPGLVCRGCGRSVTFRGGTFADAARRVLRRYAHEVAHAAEDAQAKALAE CMDCGAPLPVHRMDRPGVPLCAADRVRREQLKLARRGSKGSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13279; Mature: 13148
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPAPPDLAAWFRHRDGCAGPAVFVIEHADGHPGLVCRGCGRSVTFRGGTFADAARRVL CCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCHHHHHHHHH RRYAHEVAHAAEDAQAKALAECMDCGAPLPVHRMDRPGVPLCAADRVRREQLKLARRGSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC GSR CCC >Mature Secondary Structure TVPAPPDLAAWFRHRDGCAGPAVFVIEHADGHPGLVCRGCGRSVTFRGGTFADAARRVL CCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCEEEECCCCHHHHHHHHH RRYAHEVAHAAEDAQAKALAECMDCGAPLPVHRMDRPGVPLCAADRVRREQLKLARRGSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC GSR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA