| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is nuoI
Identifier: 119714792
GI number: 119714792
Start: 560060
End: 560650
Strand: Direct
Name: nuoI
Synonym: Noca_0528
Alternate gene names: 119714792
Gene position: 560060-560650 (Clockwise)
Preceding gene: 119714791
Following gene: 119714793
Centisome position: 11.23
GC content: 70.05
Gene sequence:
>591_bases ATGGCTGGCAGTCCCGAGCCCAAGAGCATGCGCGAGCAGTTCTGGGACCCGATCGCCGGGTTCGGCGTCACCTTCCGGAC CATGTTCAAGAAGGTCGTCACCGAGCAGTACCCGTTCGACAAGTACCCGACCGCTCCGCGCTTCCACGGTCGTCACCAGC TCAACCGCTGGCCGGACGGCCTCGAGAAGTGCGTGGGCTGCGAGCTGTGCGCGTGGGCCTGCCCGGCCGACGCGATCTAC GTCGAGGGCGCGTCCAACAGCGACGACCCGGACGGCGGGGAGCGGTTCAGCCCCGGCGAGCGCTACGGGCGCGTCTACCA GATCAACTACCTGCGCTGCATCCTCTGTGGGCTGTGCATCGAGGCCTGCCCGACCCGGGCGCTGACGATGACCAACGAGT ACGAGCTGGCCGACGACAACCGGGCCGACCTCATCTACGAGAAGTCCGACCTGCTGGCCCCGCTGCTGCCCGGCATGGAG CAGCCGCCGCACCCGATGCGCCTCGGCGACGACGAGGGCGCCTACTACCGCGGCGAGTTCGCGGCGCCGGCGCCGACCGC CCCCGGGTCGAGCACGGAGGCGGGAGCATGA
Upstream 100 bases:
>100_bases GCGGGGCCGCGGTCCCGCTCACGTTCGACCGCAGTTCACCCATCGCCTCGTCGATGCCACAGCCCAGCGCTGCCACCCGC AGCGCGGGGGAGGAGATCTG
Downstream 100 bases:
>100_bases TCGCGTTCTGGATCCTCGCCCCCGTGATGGTGATCGCGGCGCTCGGCCTCCTCTTCGTCCGCAAGGCGGTGCACGCCGCG CTGCTGCTGGCCGTCGTGAT
Product: NADH dehydrogenase subunit I
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I; NDH-1 subunit I
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MAGSPEPKSMREQFWDPIAGFGVTFRTMFKKVVTEQYPFDKYPTAPRFHGRHQLNRWPDGLEKCVGCELCAWACPADAIY VEGASNSDDPDGGERFSPGERYGRVYQINYLRCILCGLCIEACPTRALTMTNEYELADDNRADLIYEKSDLLAPLLPGME QPPHPMRLGDDEGAYYRGEFAAPAPTAPGSSTEAGA
Sequences:
>Translated_196_residues MAGSPEPKSMREQFWDPIAGFGVTFRTMFKKVVTEQYPFDKYPTAPRFHGRHQLNRWPDGLEKCVGCELCAWACPADAIY VEGASNSDDPDGGERFSPGERYGRVYQINYLRCILCGLCIEACPTRALTMTNEYELADDNRADLIYEKSDLLAPLLPGME QPPHPMRLGDDEGAYYRGEFAAPAPTAPGSSTEAGA >Mature_195_residues AGSPEPKSMREQFWDPIAGFGVTFRTMFKKVVTEQYPFDKYPTAPRFHGRHQLNRWPDGLEKCVGCELCAWACPADAIYV EGASNSDDPDGGERFSPGERYGRVYQINYLRCILCGLCIEACPTRALTMTNEYELADDNRADLIYEKSDLLAPLLPGMEQ PPHPMRLGDDEGAYYRGEFAAPAPTAPGSSTEAGA
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains
Homologues:
Organism=Homo sapiens, GI4505371, Length=146, Percent_Identity=36.3013698630137, Blast_Score=108, Evalue=3e-24, Organism=Escherichia coli, GI1788617, Length=142, Percent_Identity=41.5492957746479, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1789075, Length=131, Percent_Identity=32.0610687022901, Blast_Score=61, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17555194, Length=139, Percent_Identity=38.8489208633094, Blast_Score=106, Evalue=7e-24, Organism=Drosophila melanogaster, GI17864306, Length=139, Percent_Identity=38.8489208633094, Blast_Score=111, Evalue=3e-25,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NUOI_NOCSJ (A1SE35)
Other databases:
- EMBL: CP000509 - RefSeq: YP_921757.1 - ProteinModelPortal: A1SE35 - SMR: A1SE35 - STRING: A1SE35 - GeneID: 4596448 - GenomeReviews: CP000509_GR - KEGG: nca:Noca_0528 - eggNOG: COG1143 - HOGENOM: HBG724359 - OMA: NKAADAP - PhylomeDB: A1SE35 - ProtClustDB: PRK05888 - BioCyc: NSP35761:NOCA_0528-MONOMER - HAMAP: MF_01351 - InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR010226 - Gene3D: G3DSA:1.10.1060.10 - TIGRFAMs: TIGR01971
Pfam domain/function: PF00037 Fer4
EC number: =1.6.99.5
Molecular weight: Translated: 21741; Mature: 21609
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSPEPKSMREQFWDPIAGFGVTFRTMFKKVVTEQYPFDKYPTAPRFHGRHQLNRWPDG CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHH LEKCVGCELCAWACPADAIYVEGASNSDDPDGGERFSPGERYGRVYQINYLRCILCGLCI HHHHHCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCEEEEHHHHHHHHHHHH EACPTRALTMTNEYELADDNRADLIYEKSDLLAPLLPGMEQPPHPMRLGDDEGAYYRGEF HHCCCCEEEECCCEECCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCC AAPAPTAPGSSTEAGA CCCCCCCCCCCCCCCC >Mature Secondary Structure AGSPEPKSMREQFWDPIAGFGVTFRTMFKKVVTEQYPFDKYPTAPRFHGRHQLNRWPDG CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCHHH LEKCVGCELCAWACPADAIYVEGASNSDDPDGGERFSPGERYGRVYQINYLRCILCGLCI HHHHHCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCEEEEHHHHHHHHHHHH EACPTRALTMTNEYELADDNRADLIYEKSDLLAPLLPGMEQPPHPMRLGDDEGAYYRGEF HHCCCCEEEECCCEECCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCC AAPAPTAPGSSTEAGA CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA