| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714722
Identifier: 119714722
GI number: 119714722
Start: 487979
End: 488893
Strand: Direct
Name: 119714722
Synonym: Noca_0458
Alternate gene names: NA
Gene position: 487979-488893 (Clockwise)
Preceding gene: 119714721
Following gene: 119714723
Centisome position: 9.79
GC content: 71.8
Gene sequence:
>915_bases GTGACCGCCCACCTCGGCGCCACCGGGCTGGCCAACCTGGAGGGCCACACCGACTTCGACATCACCTGGCCGTGGTTGCG ACCCGGCGGGCTGCGCCCGGGCTCGACCGCGGTGCTCCGCGTGAAGAACGAGGCGCCGTCGCTGCCGTTCGTGCTGCCGC CGCTGCTGCGCGCGTGCGAATTCGTGCTGCTCGTCGACAACGGCTCGGACGACGGCACGCCGGACGTCGCCCGCGAGACC GCCGAGCGCGCGGGCCGGGCGGACCGGCTGACGGTGACGTCGTACCCCTTCGCGGTGGCGCGCGCCGGCGCCGAGCACCT GGCCCAGCACGAGCTGTCGGTGCACTCGCTGGCGTACTTCTACAACTGGTGCTTCTCCCAGGTCACCACCCGCTACTCCT GGAAGTGGGACGGCGACATGGTGCTCACCACCGAGGGCGAGGTCTCGATCGCCGACCTCGGCTGGCAGGTCGGTGACGTG CAGTCGATCATCCGGGTGCCGCGGCACGGGCTCTACCTGGAGAGCGAGGCCAAGGGCTACCTCGACCTCGGCTGGCGCAA CGCCGAGGAGTGGGGGTTCCCGATCGGGCCGGACTTCGTCTACACGAAGGCCTTCGAGTGGGAGATCCGCACCACGCCCG TCGGCGTGCGCTCGATCGGGCTGCCGCACGGCCTGTGCGTCGAGCTGAAGTACCTCGACGGCGAGGAGTTCGCGCACTGG ACCGACCCGGAGTCGTTCGCGACCAGCTGGCGCAACCGTCGCAAGCGCCGCGAGTGGGAGGTCTTCCACGCCCTCAAGGA GGGCCGGGTGCCGCCCGGCGTGCACGAGATCACCGCGCCCGCCGGCGTCCACATCGTCGACCACGTCACCCACGACTGGC TCCCGCACGCCCCGCGCCCGCTCCAGGTCGGCTGA
Upstream 100 bases:
>100_bases CCGCGCCCGCCGACCCCGCCGATCGGATCCCGCACGGCGTGCGCGCCGCGATACCGGCGCCGGTGCGACGAGGGCTGCGC AAGGCCATGGGCCGGAGCCG
Downstream 100 bases:
>100_bases CCCCGCGGGTCGCCCGCGTCGAGCCGGTTCGCCGACCACCCGTGTCGGGTAGGTCACGTGGCCGGGCCGTTCCGCGGGCC AGGGGCGAGGCGTAAATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTAHLGATGLANLEGHTDFDITWPWLRPGGLRPGSTAVLRVKNEAPSLPFVLPPLLRACEFVLLVDNGSDDGTPDVARET AERAGRADRLTVTSYPFAVARAGAEHLAQHELSVHSLAYFYNWCFSQVTTRYSWKWDGDMVLTTEGEVSIADLGWQVGDV QSIIRVPRHGLYLESEAKGYLDLGWRNAEEWGFPIGPDFVYTKAFEWEIRTTPVGVRSIGLPHGLCVELKYLDGEEFAHW TDPESFATSWRNRRKRREWEVFHALKEGRVPPGVHEITAPAGVHIVDHVTHDWLPHAPRPLQVG
Sequences:
>Translated_304_residues MTAHLGATGLANLEGHTDFDITWPWLRPGGLRPGSTAVLRVKNEAPSLPFVLPPLLRACEFVLLVDNGSDDGTPDVARET AERAGRADRLTVTSYPFAVARAGAEHLAQHELSVHSLAYFYNWCFSQVTTRYSWKWDGDMVLTTEGEVSIADLGWQVGDV QSIIRVPRHGLYLESEAKGYLDLGWRNAEEWGFPIGPDFVYTKAFEWEIRTTPVGVRSIGLPHGLCVELKYLDGEEFAHW TDPESFATSWRNRRKRREWEVFHALKEGRVPPGVHEITAPAGVHIVDHVTHDWLPHAPRPLQVG >Mature_303_residues TAHLGATGLANLEGHTDFDITWPWLRPGGLRPGSTAVLRVKNEAPSLPFVLPPLLRACEFVLLVDNGSDDGTPDVARETA ERAGRADRLTVTSYPFAVARAGAEHLAQHELSVHSLAYFYNWCFSQVTTRYSWKWDGDMVLTTEGEVSIADLGWQVGDVQ SIIRVPRHGLYLESEAKGYLDLGWRNAEEWGFPIGPDFVYTKAFEWEIRTTPVGVRSIGLPHGLCVELKYLDGEEFAHWT DPESFATSWRNRRKRREWEVFHALKEGRVPPGVHEITAPAGVHIVDHVTHDWLPHAPRPLQVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34134; Mature: 34003
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHLGATGLANLEGHTDFDITWPWLRPGGLRPGSTAVLRVKNEAPSLPFVLPPLLRACE CCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHCE FVLLVDNGSDDGTPDVARETAERAGRADRLTVTSYPFAVARAGAEHLAQHELSVHSLAYF EEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH YNWCFSQVTTRYSWKWDGDMVLTTEGEVSIADLGWQVGDVQSIIRVPRHGLYLESEAKGY HHHHHHHHHHCEEEEECCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCE LDLGWRNAEEWGFPIGPDFVYTKAFEWEIRTTPVGVRSIGLPHGLCVELKYLDGEEFAHW EEECCCCHHHCCCCCCCCEEEEEEEEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCCCC TDPESFATSWRNRRKRREWEVFHALKEGRVPPGVHEITAPAGVHIVDHVTHDWLPHAPRP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEHHHHHCCCCCCCCC LQVG CCCC >Mature Secondary Structure TAHLGATGLANLEGHTDFDITWPWLRPGGLRPGSTAVLRVKNEAPSLPFVLPPLLRACE CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHCE FVLLVDNGSDDGTPDVARETAERAGRADRLTVTSYPFAVARAGAEHLAQHELSVHSLAYF EEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH YNWCFSQVTTRYSWKWDGDMVLTTEGEVSIADLGWQVGDVQSIIRVPRHGLYLESEAKGY HHHHHHHHHHCEEEEECCCEEEEECCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCE LDLGWRNAEEWGFPIGPDFVYTKAFEWEIRTTPVGVRSIGLPHGLCVELKYLDGEEFAHW EEECCCCHHHCCCCCCCCEEEEEEEEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCCCC TDPESFATSWRNRRKRREWEVFHALKEGRVPPGVHEITAPAGVHIVDHVTHDWLPHAPRP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEHHHHHCCCCCCCCC LQVG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA