| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714660
Identifier: 119714660
GI number: 119714660
Start: 426148
End: 426810
Strand: Direct
Name: 119714660
Synonym: Noca_0395
Alternate gene names: NA
Gene position: 426148-426810 (Clockwise)
Preceding gene: 119714659
Following gene: 119714661
Centisome position: 8.55
GC content: 68.63
Gene sequence:
>663_bases GTGGCGGAGGAAACGCAGGGCAGCGCCAGCGATGCCTGGTACCCGGCGCCTGCGGGCTATTGGGTTCCAGCGGAGGAGGC GGACCGGCCCGACGTCTGGCCACACCGTTTCGGCGACCTCTTCCGCGCTCCGCCGAGCGACGCCAACGGCACGCCCTTGA CGACAAGCGACGGGCGACCGTGGGACGCGGTCATGGTCTACTCGCCCAGTTGCGAGGTCATCTCGAAGGCGAAGCAGAGC GACAGCGTCGAGGTCGTGCGGGTCGTCCGTCTCGACACCCAAGACCCGAAAGCCGCCGCCGCGATCATCGGTGGCTGGCA GGAACGACAGGGCCGGATCGGAGTCGCGTACGCACACACGGTGTTTCTCGCCGCCGTCGCCGGCCACCCCACTCACGACT ATCCGATGTTCGCCCACCTCAAGTCCACCGTGCGCGTCGCCCTCGGCGATCTACGTGCGGCAGGGCGCATCGCGGCGTTG ACCCACGACGCTCGGATCGCCGTGATCCGACGCGACCTGTACTACCGGTACCGATGGTTGGTTCCCATCGAGGAGGTGAA GGCCGCCGAGATCGACCGGATCTCCAACGATCCGCACTTCACGCCGCCGCGCCCCGGGTGGGCACCCGACGCCTCGGAAG AGAACGCCGAGACGCACGGCTGA
Upstream 100 bases:
>100_bases AACCCATCACGCGTGCACACCTCTCGCACGTGGGCGGACCGATCGAAGAGTTCGGTTCGGATGACGACCTCAACCTCGGC TGACCGAGGCTGAGGCACCC
Downstream 100 bases:
>100_bases AGGCCGGCCGCCACCTGGCATCCGGCCGGCGGGGCCCGGATCGTTGCCGCCTGCCGCGCGGGAGACCACGCCTTACGAGG TCGTCGGTTCGATTCCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAEETQGSASDAWYPAPAGYWVPAEEADRPDVWPHRFGDLFRAPPSDANGTPLTTSDGRPWDAVMVYSPSCEVISKAKQS DSVEVVRVVRLDTQDPKAAAAIIGGWQERQGRIGVAYAHTVFLAAVAGHPTHDYPMFAHLKSTVRVALGDLRAAGRIAAL THDARIAVIRRDLYYRYRWLVPIEEVKAAEIDRISNDPHFTPPRPGWAPDASEENAETHG
Sequences:
>Translated_220_residues MAEETQGSASDAWYPAPAGYWVPAEEADRPDVWPHRFGDLFRAPPSDANGTPLTTSDGRPWDAVMVYSPSCEVISKAKQS DSVEVVRVVRLDTQDPKAAAAIIGGWQERQGRIGVAYAHTVFLAAVAGHPTHDYPMFAHLKSTVRVALGDLRAAGRIAAL THDARIAVIRRDLYYRYRWLVPIEEVKAAEIDRISNDPHFTPPRPGWAPDASEENAETHG >Mature_219_residues AEETQGSASDAWYPAPAGYWVPAEEADRPDVWPHRFGDLFRAPPSDANGTPLTTSDGRPWDAVMVYSPSCEVISKAKQSD SVEVVRVVRLDTQDPKAAAAIIGGWQERQGRIGVAYAHTVFLAAVAGHPTHDYPMFAHLKSTVRVALGDLRAAGRIAALT HDARIAVIRRDLYYRYRWLVPIEEVKAAEIDRISNDPHFTPPRPGWAPDASEENAETHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24221; Mature: 24090
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEETQGSASDAWYPAPAGYWVPAEEADRPDVWPHRFGDLFRAPPSDANGTPLTTSDGRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCC WDAVMVYSPSCEVISKAKQSDSVEVVRVVRLDTQDPKAAAAIIGGWQERQGRIGVAYAHT CEEEEEECCCHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHCCHHHHCCCEEEHHHHH VFLAAVAGHPTHDYPMFAHLKSTVRVALGDLRAAGRIAALTHDARIAVIRRDLYYRYRWL HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEHHHHEEEEEE VPIEEVKAAEIDRISNDPHFTPPRPGWAPDASEENAETHG CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AEETQGSASDAWYPAPAGYWVPAEEADRPDVWPHRFGDLFRAPPSDANGTPLTTSDGRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCC WDAVMVYSPSCEVISKAKQSDSVEVVRVVRLDTQDPKAAAAIIGGWQERQGRIGVAYAHT CEEEEEECCCHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHCCHHHHCCCEEEHHHHH VFLAAVAGHPTHDYPMFAHLKSTVRVALGDLRAAGRIAALTHDARIAVIRRDLYYRYRWL HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEEHHHHEEEEEE VPIEEVKAAEIDRISNDPHFTPPRPGWAPDASEENAETHG CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA