| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714659
Identifier: 119714659
GI number: 119714659
Start: 425549
End: 426130
Strand: Direct
Name: 119714659
Synonym: Noca_0394
Alternate gene names: NA
Gene position: 425549-426130 (Clockwise)
Preceding gene: 119714658
Following gene: 119714660
Centisome position: 8.54
GC content: 66.84
Gene sequence:
>582_bases ATGGAGAAGCAGTCGTTCGGGCTGATCAGCGCCTCCGGAGGCAAGGGCGGCAGGGAAGGCAAGGCCGCGCGTTCTGGAGC CAAGAGCGGCAGGTCTACGACCACGGTCGACAAGTCCGCCCAGTTCCGTCTGCGCTCCGCCACCAAGGGCGAGCGGCGCG TGTCATCGAGTGCACTTCGCCGCGACACCCGACCGACGCTGGACCTCCTCCAAGACACCGACGCAGTCGCGGTCACGCAC TACAACGAGGTCGAAGGCTATCTGGTCGCGCCCGACCGTTATCTCGGGCTGGTCGCCCGCGTCGAGGAGGCAGATGAGCG CGAGAGCGAACTCGCCTCGACCATGACCGTGCTGCTCGCCGCTGCGCGCACCGGCGTTGCGGTCCCGTCAGAGATGCTCG AACGAGTCATGCCCCGCGTCGATGTGGCTGAGCGGTGGCGCGAAATCGCCGAGTTCGCGGCCACATTCCCGACCCGGATC ACTGCCGGTGAGCACGGCGAACCCATCACGCGTGCACACCTCTCGCACGTGGGCGGACCGATCGAAGAGTTCGGTTCGGA TGACGACCTCAACCTCGGCTGA
Upstream 100 bases:
>100_bases CGGTTGTGACTTGAAATGTTGTGCAACATCTTGTGCAACCTCGCCGTCTCATCGATAGTGGAAGAGAAGTGAGAGTCGGC GACATGCGGAAGGGGGAGCC
Downstream 100 bases:
>100_bases CCGAGGCTGAGGCACCCGTGGCGGAGGAAACGCAGGGCAGCGCCAGCGATGCCTGGTACCCGGCGCCTGCGGGCTATTGG GTTCCAGCGGAGGAGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MEKQSFGLISASGGKGGREGKAARSGAKSGRSTTTVDKSAQFRLRSATKGERRVSSSALRRDTRPTLDLLQDTDAVAVTH YNEVEGYLVAPDRYLGLVARVEEADERESELASTMTVLLAAARTGVAVPSEMLERVMPRVDVAERWREIAEFAATFPTRI TAGEHGEPITRAHLSHVGGPIEEFGSDDDLNLG
Sequences:
>Translated_193_residues MEKQSFGLISASGGKGGREGKAARSGAKSGRSTTTVDKSAQFRLRSATKGERRVSSSALRRDTRPTLDLLQDTDAVAVTH YNEVEGYLVAPDRYLGLVARVEEADERESELASTMTVLLAAARTGVAVPSEMLERVMPRVDVAERWREIAEFAATFPTRI TAGEHGEPITRAHLSHVGGPIEEFGSDDDLNLG >Mature_193_residues MEKQSFGLISASGGKGGREGKAARSGAKSGRSTTTVDKSAQFRLRSATKGERRVSSSALRRDTRPTLDLLQDTDAVAVTH YNEVEGYLVAPDRYLGLVARVEEADERESELASTMTVLLAAARTGVAVPSEMLERVMPRVDVAERWREIAEFAATFPTRI TAGEHGEPITRAHLSHVGGPIEEFGSDDDLNLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20842; Mature: 20842
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKQSFGLISASGGKGGREGKAARSGAKSGRSTTTVDKSAQFRLRSATKGERRVSSSALR CCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH RDTRPTLDLLQDTDAVAVTHYNEVEGYLVAPDRYLGLVARVEEADERESELASTMTVLLA CCCCCHHHHHHCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTGVAVPSEMLERVMPRVDVAERWREIAEFAATFPTRITAGEHGEPITRAHLSHVGGP HHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC IEEFGSDDDLNLG HHHHCCCCCCCCC >Mature Secondary Structure MEKQSFGLISASGGKGGREGKAARSGAKSGRSTTTVDKSAQFRLRSATKGERRVSSSALR CCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH RDTRPTLDLLQDTDAVAVTHYNEVEGYLVAPDRYLGLVARVEEADERESELASTMTVLLA CCCCCHHHHHHCCCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AARTGVAVPSEMLERVMPRVDVAERWREIAEFAATFPTRITAGEHGEPITRAHLSHVGGP HHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCC IEEFGSDDDLNLG HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA