| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714609
Identifier: 119714609
GI number: 119714609
Start: 364136
End: 365311
Strand: Direct
Name: 119714609
Synonym: Noca_0343
Alternate gene names: NA
Gene position: 364136-365311 (Clockwise)
Preceding gene: 119714608
Following gene: 119714615
Centisome position: 7.3
GC content: 72.36
Gene sequence:
>1176_bases GTGAACCTGCTCGACTGGCTCCTGGTCGTGCTCGTGCTCGCCTACGCGCTCTCCGGCTACTGGCAGGGCTTCATCACCGG TGCCTTCGCGACCGGGGGGCTGCTGCTCGGCGGACTGTTCGGCGTGTGGCTGGCCCCGGTCGCACTGGGTGACGCCAACC CCTCCCTGATGGTCTCCCTGGGCGCGCTGTTCATCGTGATCCTGTCCGCGTCGCTGGGGCAGGCCGTGCTCCAGTTCGCC GGCGCCCGGATCCGCGAGCGGATCACCTGGCAGCCGGCCCGCGCCCTCGACGCGGTCGGCGGCGCCATGCTCAGCGCCGT GGCGGTCCTCGTGGTCGCCTGGGCGCTCGGCGTCGCGATCTCGGGGTCTCGGATCGGCGGCGTCACCCCGCTGGTGCGGG GCTCGACCGTGCTCTCCCACGTCGACGAGGTGATGCCCGCCAGCGCCGACGGCGCGCTGCAGGCGTTCAACGACGTCGTC GGCACCAGCTTCTTTCCCCGCTACCTCGAGCCGTTCGCGCCCGAGCGGATCGTCGAGGTCGGACCCGGCCCCAAGCGGCT GCTCAACGACCCCGACGTCGAGCGCGCCGGGTCGAGCGTCCTCAAGATCCGCGGCACCAACGAGTGTGGCCGGGGTGTCG AGGGGTCCGGGTTCCTGTACGCCGGCAACCGGCTGATGACCAACGCCCACGTCGTCGCCGGGATCGACGACCCCGAGGTC ATCGTCGGCGACGAGTCGGTCCCGGCGGACGTCGTCTACTACAACCCCGACATCGACGTGGCGGTGCTCTCCTTCGACAG CGGGGACCTGCCGGCTCTGCGCTTCGACCGCGACGCCGGCGCGCCCGACGGTGTCGCGATCCTGGGCTACCCGCAGGACG GGCCCTACCACGTGGAGCCCGCCCGGATCCGCTCCGAGCAGCGGCTCCGCTCACCCAACATCTACGGCGACGGCGCGGTG ATCCGTGAGGTCTACTCCCTGCGCGGGCGGATCCTGCCGGGCAACTCCGGCGGGCCGATCGTGTCCTCGGCCGGCGACGT CGTCGGCGTGGTGTTCGCCGCCTCGGTCACCGACCACGAAACCGGCTACGCGCTGACCGCCGGACAGGTCTCCGCCGCCG CGGCCGCCGGCCTGACCAGCTCGAGCCAGGTGTCGACCGGCGGTTGTGCTGGGTGA
Upstream 100 bases:
>100_bases GCGACCTGCCGTCGTACATGCTGCAGGCTGACCCACGACGCGGTCGGCTCCTCGACATCGAGGACGACCAGGACGACGAC CAGGACGAGGAGGAGGACGG
Downstream 100 bases:
>100_bases GCGGAGCCGGGTCAGCGGCTGCGGACGGGGGGAACCGGCCTGCAAGTTTCATCGGCCGGCCGACAGAGCTCGTGGCTGGA CGATGAAGCTTCATCGTCCA
Product: peptidase S1 and S6, chymotrypsin/Hap
Products: NA
Alternate protein names: Colicin V Production Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Membrane-Associated Serine Protease; Trypsin-Like Serine Protease; Protease; Peptidase; Serine Peptidase; Serine Proteinase; Trypsin-Like Serine Protease With C-Terminal PDZ Domain; S1C Family Peptidase
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSLGALFIVILSASLGQAVLQFA GARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAISGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVV GTSFFPRYLEPFAPERIVEVGPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEPARIRSEQRLRSPNIYGDGAV IREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHETGYALTAGQVSAAAAAGLTSSSQVSTGGCAG
Sequences:
>Translated_391_residues MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSLGALFIVILSASLGQAVLQFA GARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAISGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVV GTSFFPRYLEPFAPERIVEVGPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEPARIRSEQRLRSPNIYGDGAV IREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHETGYALTAGQVSAAAAAGLTSSSQVSTGGCAG >Mature_391_residues MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSLGALFIVILSASLGQAVLQFA GARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAISGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVV GTSFFPRYLEPFAPERIVEVGPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEPARIRSEQRLRSPNIYGDGAV IREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHETGYALTAGQVSAAAAAGLTSSSQVSTGGCAG
Specific function: Unknown
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40301; Mature: 40301
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH GALFIVILSASLGQAVLQFAGARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE SGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVVGTSFFPRYLEPFAPERIVEV CCCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCEEEC GPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV CCCHHHHCCCCCHHHCCCCEEEEECCCHHCCCCCCCCEEEECCEEEECCEEEEECCCCCE IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEP EECCCCCCCCEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCCEECCH ARIRSEQRLRSPNIYGDGAVIREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHE HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCC TGYALTAGQVSAAAAAGLTSSSQVSTGGCAG CCEEEECCCHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MNLLDWLLVVLVLAYALSGYWQGFITGAFATGGLLLGGLFGVWLAPVALGDANPSLMVSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH GALFIVILSASLGQAVLQFAGARIRERITWQPARALDAVGGAMLSAVAVLVVAWALGVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE SGSRIGGVTPLVRGSTVLSHVDEVMPASADGALQAFNDVVGTSFFPRYLEPFAPERIVEV CCCCCCCCCCHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCEEEC GPGPKRLLNDPDVERAGSSVLKIRGTNECGRGVEGSGFLYAGNRLMTNAHVVAGIDDPEV CCCHHHHCCCCCHHHCCCCEEEEECCCHHCCCCCCCCEEEECCEEEECCEEEEECCCCCE IVGDESVPADVVYYNPDIDVAVLSFDSGDLPALRFDRDAGAPDGVAILGYPQDGPYHVEP EECCCCCCCCEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCCEEEEECCCCCCEECCH ARIRSEQRLRSPNIYGDGAVIREVYSLRGRILPGNSGGPIVSSAGDVVGVVFAASVTDHE HHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEEEECCCCC TGYALTAGQVSAAAAAGLTSSSQVSTGGCAG CCEEEECCCHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA