| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714557
Identifier: 119714557
GI number: 119714557
Start: 308206
End: 308595
Strand: Reverse
Name: 119714557
Synonym: Noca_0290
Alternate gene names: NA
Gene position: 308595-308206 (Counterclockwise)
Preceding gene: 119714560
Following gene: 119714556
Centisome position: 6.19
GC content: 77.44
Gene sequence:
>390_bases GTGCCGCACCGGATCCCCCGTCGCACGCGGCTGGCGCTCGGCGCCGTCAAGCTGACCGTGGTCGCCGCGACCGTGGTCGC GGGGCTCTCCACCCCGGTCACCCAGGCCGGCGCCGGGTACGCCGGGCACCGGGTCGGCGAGGTCGCGGACCTGCCCAGCC CCGTGGCCCGGATCCTCGCGAAGCACGACTGCTCGACCAGCGGGTTCGCCGACGCCGCCCCGGCCTCGGCCGTCATCCGC ACCGCGACCGGCCGGTTCCGGCACGTGTCGTTCGACGAGGGCTGGGCGGTCTACACCCGGCGGGGCGCCGCGAGCCTCGT CGCGGTCTGCCTCGACCGGGCGCCCGAGGACCGGGAGCCGACGAAGGCCCGCGAACCAAGACCCCGGTGA
Upstream 100 bases:
>100_bases GTTGACAGGTCCAAGGAAGCGCAGCCGCCGAGTGGGGGCGCCGCGCCGGTGGGCCCTGCCCGTCCCCGCCCGTCACCCAC CCGTGGCCGAAGGAGGACCC
Downstream 100 bases:
>100_bases GCCGCACTCGGGCGTGACCCGCACGACGCGGGCCCCAGTACTACGCCGGCGCAGGTTTGGTCACCGGCAGATGGAACTCG CACGGGAAGTGGGGCCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPHRIPRRTRLALGAVKLTVVAATVVAGLSTPVTQAGAGYAGHRVGEVADLPSPVARILAKHDCSTSGFADAAPASAVIR TATGRFRHVSFDEGWAVYTRRGAASLVAVCLDRAPEDREPTKAREPRPR
Sequences:
>Translated_129_residues MPHRIPRRTRLALGAVKLTVVAATVVAGLSTPVTQAGAGYAGHRVGEVADLPSPVARILAKHDCSTSGFADAAPASAVIR TATGRFRHVSFDEGWAVYTRRGAASLVAVCLDRAPEDREPTKAREPRPR >Mature_128_residues PHRIPRRTRLALGAVKLTVVAATVVAGLSTPVTQAGAGYAGHRVGEVADLPSPVARILAKHDCSTSGFADAAPASAVIRT ATGRFRHVSFDEGWAVYTRRGAASLVAVCLDRAPEDREPTKAREPRPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13636; Mature: 13505
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRIPRRTRLALGAVKLTVVAATVVAGLSTPVTQAGAGYAGHRVGEVADLPSPVARILA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHH KHDCSTSGFADAAPASAVIRTATGRFRHVSFDEGWAVYTRRGAASLVAVCLDRAPEDREP HCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCEEEEECCCHHHHHHHHHHCCCCCCCC TKAREPRPR CCCCCCCCC >Mature Secondary Structure PHRIPRRTRLALGAVKLTVVAATVVAGLSTPVTQAGAGYAGHRVGEVADLPSPVARILA CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHH KHDCSTSGFADAAPASAVIRTATGRFRHVSFDEGWAVYTRRGAASLVAVCLDRAPEDREP HCCCCCCCCCCCCCHHHHHHHCCCCEEECCCCCCEEEEECCCHHHHHHHHHHCCCCCCCC TKAREPRPR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA