| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714549
Identifier: 119714549
GI number: 119714549
Start: 303599
End: 304468
Strand: Direct
Name: 119714549
Synonym: Noca_0282
Alternate gene names: NA
Gene position: 303599-304468 (Clockwise)
Preceding gene: 119714548
Following gene: 119714550
Centisome position: 6.09
GC content: 70.92
Gene sequence:
>870_bases ATGACCAGGATCCCCCTCGAGGAAGCGCCACGCATCCCCATCAACGTGGCGATCGCCGGCGTCCAGAAGGCGGGCACGAG CTCGCTCTTCGACCTGCTGCGCAAGCACCCCGAGGTATGCGCCGGGCCCCGCAAGGAGTGGCACTTCTTCGACGACGAGA AGCGGTCGTGGGCGGACCCGGACTACAGCGACTACTGGGCGCCGGGCCGCACCGACCGGCAGCGGATCGCGATCGACGGC ACGCCGGCCTACACGTTCTGGCCGCACGCGATGGAGCGGATGCACGCCTACCGTCCGGACATGCGGCTGATCGTCAGCCT CCGGGACCCGATCGAGCGGGCGTTCTCGCACTGGGCGATGTACTACGGGAAGCTGCCGGCCTTCCCGAGCTTCAGTCAGC TGGCCCAGGGCCCGCGCCGCGAGGGTCTGCTCGAGCGGATCCCGGAGGGCTGGAACCACCTCCGGATGCGGCGGTGGTCG ATGATCCCCCGCGGCCTGTACGGCGCGCAGGTCGCGCGCGGGCTGGAGCTGTTCTCGCGCGAGCAGTGGCTGTTCCTGGA CTTCCACCGGTTCGTCGGCGAGCACCGCGAGACCCTGGACCGGGTGACCTCCTTCCTCGGCCTGGATCCCTACCCCAAGG AGCCGCGCCTGCGCGTGATCCAGTCGACCCGTCAGGACCTGGTGGCTGCCGCGCCGACGGCCGCAGACGTCAGCCGACTC GTCGAGGTGTACGCCGACGACCTCGACCTGCTGACCCGGCTGACGGGGCTCGACGTGAGCGACTGGCCGACCCGGCGGGT CCGCGACGGGCTGCTCGACCCGGCGGATCTCGCCGATCGACTGGGTCGGAAGGCCGGCCTGCTGGGCTGA
Upstream 100 bases:
>100_bases GACGCTCAGCGGGGGCTCCGACGTTCGGGGCCCGGAGCGGGGCCGCCGGTCTGGTATGCATGGCTGTCCGCCACCGAGTC GCCGCTGAGGTGCTTGTCGT
Downstream 100 bases:
>100_bases GTGGCATTCCGGGGTCCGGGGTCCGCTGGCCACTCCCGGTCCGGGTCCGCTGGTGACCTTGGCCTCTTGCCGGTCCGGCG ACCGGGTGCGTCGATGGTGT
Product: hypothetical protein
Products: adenosine 3',5'-bisphosphate; [heparan sulfate]-glucosamine 3-sulfate
Alternate protein names: Sulfotransferase Domain Superfamily; Deacetylase Sulfotransferase; Sulfotransferase Protein; 3-Beta-Hydroxysteroid Sulfotransferase; Sulfotransferase Family Protein; Sulfotransferase Domain-Containing Protein
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTRIPLEEAPRIPINVAIAGVQKAGTSSLFDLLRKHPEVCAGPRKEWHFFDDEKRSWADPDYSDYWAPGRTDRQRIAIDG TPAYTFWPHAMERMHAYRPDMRLIVSLRDPIERAFSHWAMYYGKLPAFPSFSQLAQGPRREGLLERIPEGWNHLRMRRWS MIPRGLYGAQVARGLELFSREQWLFLDFHRFVGEHRETLDRVTSFLGLDPYPKEPRLRVIQSTRQDLVAAAPTAADVSRL VEVYADDLDLLTRLTGLDVSDWPTRRVRDGLLDPADLADRLGRKAGLLG
Sequences:
>Translated_289_residues MTRIPLEEAPRIPINVAIAGVQKAGTSSLFDLLRKHPEVCAGPRKEWHFFDDEKRSWADPDYSDYWAPGRTDRQRIAIDG TPAYTFWPHAMERMHAYRPDMRLIVSLRDPIERAFSHWAMYYGKLPAFPSFSQLAQGPRREGLLERIPEGWNHLRMRRWS MIPRGLYGAQVARGLELFSREQWLFLDFHRFVGEHRETLDRVTSFLGLDPYPKEPRLRVIQSTRQDLVAAAPTAADVSRL VEVYADDLDLLTRLTGLDVSDWPTRRVRDGLLDPADLADRLGRKAGLLG >Mature_288_residues TRIPLEEAPRIPINVAIAGVQKAGTSSLFDLLRKHPEVCAGPRKEWHFFDDEKRSWADPDYSDYWAPGRTDRQRIAIDGT PAYTFWPHAMERMHAYRPDMRLIVSLRDPIERAFSHWAMYYGKLPAFPSFSQLAQGPRREGLLERIPEGWNHLRMRRWSM IPRGLYGAQVARGLELFSREQWLFLDFHRFVGEHRETLDRVTSFLGLDPYPKEPRLRVIQSTRQDLVAAAPTAADVSRLV EVYADDLDLLTRLTGLDVSDWPTRRVRDGLLDPADLADRLGRKAGLLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI5174465, Length=206, Percent_Identity=33.495145631068, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI5174467, Length=194, Percent_Identity=34.5360824742268, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI116089312, Length=212, Percent_Identity=34.4339622641509, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI104876423, Length=194, Percent_Identity=32.4742268041237, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI5174463, Length=199, Percent_Identity=30.6532663316583, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4826764, Length=212, Percent_Identity=26.8867924528302, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17533853, Length=196, Percent_Identity=31.1224489795918, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71991175, Length=229, Percent_Identity=27.0742358078603, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24643211, Length=192, Percent_Identity=28.125, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.8.2.23
Molecular weight: Translated: 33360; Mature: 33229
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIPLEEAPRIPINVAIAGVQKAGTSSLFDLLRKHPEVCAGPRKEWHFFDDEKRSWADP CCCCCCCCCCCCCEEEEEECHHHCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCC DYSDYWAPGRTDRQRIAIDGTPAYTFWPHAMERMHAYRPDMRLIVSLRDPIERAFSHWAM CCCCCCCCCCCCCCEEEECCCCCCEECHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHH YYGKLPAFPSFSQLAQGPRREGLLERIPEGWNHLRMRRWSMIPRGLYGAQVARGLELFSR HHHCCCCCCCHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC EQWLFLDFHRFVGEHRETLDRVTSFLGLDPYPKEPRLRVIQSTRQDLVAAAPTAADVSRL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH VEVYADDLDLLTRLTGLDVSDWPTRRVRDGLLDPADLADRLGRKAGLLG HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TRIPLEEAPRIPINVAIAGVQKAGTSSLFDLLRKHPEVCAGPRKEWHFFDDEKRSWADP CCCCCCCCCCCCEEEEEECHHHCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCC DYSDYWAPGRTDRQRIAIDGTPAYTFWPHAMERMHAYRPDMRLIVSLRDPIERAFSHWAM CCCCCCCCCCCCCCEEEECCCCCCEECHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHH YYGKLPAFPSFSQLAQGPRREGLLERIPEGWNHLRMRRWSMIPRGLYGAQVARGLELFSR HHHCCCCCCCHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC EQWLFLDFHRFVGEHRETLDRVTSFLGLDPYPKEPRLRVIQSTRQDLVAAAPTAADVSRL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHH VEVYADDLDLLTRLTGLDVSDWPTRRVRDGLLDPADLADRLGRKAGLLG HHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 3'-phosphoadenylyl sulfate; [heparan sulfate]-glucosamine
Specific reaction: 3'-phosphoadenylyl sulfate + [heparan sulfate]-glucosamine = adenosine 3',5'-bisphosphate + [heparan sulfate]-glucosamine 3-sulfate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA