Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is treY [H]

Identifier: 119714535

GI number: 119714535

Start: 287511

End: 289760

Strand: Reverse

Name: treY [H]

Synonym: Noca_0268

Alternate gene names: 119714535

Gene position: 289760-287511 (Counterclockwise)

Preceding gene: 119714536

Following gene: 119714534

Centisome position: 5.81

GC content: 74.36

Gene sequence:

>2250_bases
ATGCGCGCGCCGGTCAGCACCTACCGTCTGCAGATCACGCCCGAGTTCGACCTGTTCGAGGCGGCCCGCCGGTTGCCGTA
CCTGCGCGCCCTGGGCGCCGACTGGGTCTACCTCTCGCCGCTGCTCGCCTCCGAGCCGGGCAGCAACCACGGGTACGACG
TCGTCGCGTTCGACCGAGTCGACCCCGCGCGCGGCGGCGCCGAGGGGCTCGCCGTACTCTCCGCGGAGGCGCGCCGGCTC
GGGATGGGGATCCTGGTCGACATCGTGCCCAACCACGTCGGCGTCGCCACCCCGGCCGAGAACGCGTGGTGGTGGGACCT
GCTCCAGCACGGCCGCGCCTCGAAGCACGCCGACGCCTTCGACGTCGACTGGGACGCCGGGGACGGCAAGGTGCTGATCC
CGGTGGTCGGCGACGGCGACGGGGGCTCGATCCGGGTCGAGGACGGAGAGGTCCGCTACCACGACCACCGGTTCCCGCTC
GCGGCCGGCACGTCCGCGCACGAGGAGCAGCACTACCGCCTGGTGTCTTGGCGCGACGCCGACGACAAGCTGAACTACCG
GCGGTTCTTCGCGGTCAACACGCTGGCGGGCGTACGCGTCGAGGAGCCGGAGGTCTTCGCGCAGTCCCACGTCGAGATCC
GCCGGTGGTTCGCCGAGGGTCTCGTCGACGGCCTGCGGGTCGACCACCCGGACGGCCTGCGCGATCCCCAGGGCTACCTC
GACGACCTGGCCGACCTCACCGGCCGCGCGTACGTGCTCGTCGAGAAGATCCTCGAGCCCGGCGAGAAGCTGCCGCGCTC
GTGGGCGACCCAGGGCACCACCGGGTACGACGGGCTCGCGCTGGTCGACCGGGTGCTCACCGACCCCACGGGCCAGGCGC
CGCTGGACCGGCTCGAGGCCCGCCTGCGTGGCGCGCCGGTCGACTGGCCCGACCTGATCCACGGCACCAAGCGCGCCGTC
GCCGATGGGATCCTCCAGTCGGAGGTGCGCCGCATCGTCCGCGAGATCGGGCCGGAGGACCCCGCGCCGTACCGCGACGC
GGTCGCCGAGCTGCTGACCTGCTTCCCCGTCTACCGGTCCTACCTGCCCGAGGGGCGCGACCATCTCGCCGAGGCGTTCG
CCCGTGCGCGGCGCACCCGTCCCGACCTGGCCGCGACGTACGACGCCCTCGAGCCCGTGCTCACCGACGCCGCCAGCCCG
CCCGCGCTGCGCTTCCAGCAGACCAGCGGCATGGTGATGGCCAAGGGCGTCGAGGACTGCGCGTTCTACCGCTGGTCGCG
GCTCACGTCGCTGACCGAGGTCGGCGGGGACCCGTCGGTCTTCGCGGTCACGGTCGCGGGCTTCCACGAGGCGATGGCCG
CGCGGCAGCGGGACTGGCCGCACACGATGAACACGCTGTCGACGCACGACACGAAGCGCGGCGAGGACGTCCGGGCCCGG
ATCACGGCGCTCGCCGAGATGCCGGACACCTGGGCCGCTGCGCTGGAGCGGCTGCTCGCGCTCGCGCCGGTGCCCGACCC
CGGCTTCGGGTCGCTGCTGTGGCAGGCCGTCCTCGGCGCCTGGACGCCCGAGCACCTGCCGGACCTGCGCGACCGGCTGC
ACGGCTACGCGGAGAAGGCGATGCGCGAGGCCGGTGACCGCACGACGTGGACCGAGCCGGACGCGACGTACGAGGCGGCC
GTGCACGCCGCCGTCGACGCCGCCTTCGACTCCACGGACGTGCGGGCGGTGCTCGCCGACCTCGCCGCGCGCATCGACGC
GCCGGGGCGGTCGAACTCCCTCGCCGCCAAGCTCGTGGCGATCACCATGCCCGGGGTGCCCGACGTCTACCAGGGCAGCG
AGCTGTTCGAGACCTCGCTGGTCGACCCCGACAACCGCCGCCCCGTCGACTTCGACCACCGAGCGGCGGTGCTGGCCGGG
ACCGACGCCGACGACGCCGTCGACAAGCTGCACGTCACCTGCTCGGCACTCACGCTGCGCCGGGACCGGCCGGAGCTGTT
CACGACGTACGCCGCCGTGCCGGCGACCGGGACTGCGGCGGACCACGTGCTGGCGTTCGACCGCGGCGGCGCGATCAGCG
TCGCCACCCGCCTCCCGGTGGGCCTCGCGGCGCGCGGCGGGTGGGGTGACACCGTCCTGGAGCTGCCCGCCGGCCGCTGG
CACGACGTGCTCACCGGGTCGTCCACCGAGGGCCGCCTCGCCGATCTGCTCGCCGCGCTGCCGGTGGCCATGCTGGTGCG
GGCGGACTGA

Upstream 100 bases:

>100_bases
TCGCGCAGCCTGATCGTGCTCCGCGAGCACCGCGAGCCGGAGGCCGAGGTCGACCACTCGGTGGCAGCGTCGGTCGCCCA
GGCCCGCCGGGGCTGAGGCG

Downstream 100 bases:

>100_bases
TCCGATGACCCACGGACCGTTCGACGTCTGGGCGCCGCTGCCCCGCCGGTTGCGCCTGGCCGTCGCCGGCGAGACCGTCG
CGATGCGCCGCGGCGAGGGC

Product: maltooligosyl trehalose synthase

Products: NA

Alternate protein names: (1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase [H]

Number of amino acids: Translated: 749; Mature: 749

Protein sequence:

>749_residues
MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRVDPARGGAEGLAVLSAEARRL
GMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAFDVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPL
AAGTSAHEEQHYRLVSWRDADDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL
DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEARLRGAPVDWPDLIHGTKRAV
ADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRSYLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASP
PALRFQQTSGMVMAKGVEDCAFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR
ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKAMREAGDRTTWTEPDATYEAA
VHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVAITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAG
TDADDAVDKLHVTCSALTLRRDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW
HDVLTGSSTEGRLADLLAALPVAMLVRAD

Sequences:

>Translated_749_residues
MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRVDPARGGAEGLAVLSAEARRL
GMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAFDVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPL
AAGTSAHEEQHYRLVSWRDADDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL
DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEARLRGAPVDWPDLIHGTKRAV
ADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRSYLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASP
PALRFQQTSGMVMAKGVEDCAFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR
ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKAMREAGDRTTWTEPDATYEAA
VHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVAITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAG
TDADDAVDKLHVTCSALTLRRDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW
HDVLTGSSTEGRLADLLAALPVAMLVRAD
>Mature_749_residues
MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRVDPARGGAEGLAVLSAEARRL
GMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAFDVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPL
AAGTSAHEEQHYRLVSWRDADDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL
DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEARLRGAPVDWPDLIHGTKRAV
ADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRSYLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASP
PALRFQQTSGMVMAKGVEDCAFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR
ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKAMREAGDRTTWTEPDATYEAA
VHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVAITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAG
TDADDAVDKLHVTCSALTLRRDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW
HDVLTGSSTEGRLADLLAALPVAMLVRAD

Specific function: Catalyzes the conversion of maltooligosaccharide into the non-reducing saccharide, maltooligosyl trehalose (alpha- maltooligosyl alpha-D-glucoside) by intramolecular transglycosylation [H]

COG id: COG3280

COG function: function code G; Maltooligosyl trehalose synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013797
- InterPro:   IPR012767 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =5.4.99.15 [H]

Molecular weight: Translated: 81695; Mature: 81695

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRV
CCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCEEECHHHHCCCCCCCCCEEEEECCC
DPARGGAEGLAVLSAEARRLGMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAF
CCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
DVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPLAAGTSAHEEQHYRLVSWRDA
CCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCC
DDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL
CCCCCCEEEEEEEHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEA
HHHHHHCCCHHHHHHHHHCCHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
RLRGAPVDWPDLIHGTKRAVADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRS
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
YLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASPPALRFQQTSGMVMAKGVEDC
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCHHH
AFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR
HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHH
ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKA
HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH
MREAGDRTTWTEPDATYEAAVHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVA
HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHEEEEE
ITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAGTDADDAVDKLHVTCSALTLR
EECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC
RDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW
CCCCHHHHHHHCCCCCCCCHHHEEEECCCCCEEEHHHCCCCEECCCCCCCCEEECCCCCC
HDVLTGSSTEGRLADLLAALPVAMLVRAD
HHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAPVSTYRLQITPEFDLFEAARRLPYLRALGADWVYLSPLLASEPGSNHGYDVVAFDRV
CCCCCCEEEEEECCCHHHHHHHHHCCHHHHHCCCCEEECHHHHCCCCCCCCCEEEEECCC
DPARGGAEGLAVLSAEARRLGMGILVDIVPNHVGVATPAENAWWWDLLQHGRASKHADAF
CCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
DVDWDAGDGKVLIPVVGDGDGGSIRVEDGEVRYHDHRFPLAAGTSAHEEQHYRLVSWRDA
CCCCCCCCCEEEEEEEECCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCC
DDKLNYRRFFAVNTLAGVRVEEPEVFAQSHVEIRRWFAEGLVDGLRVDHPDGLRDPQGYL
CCCCCCEEEEEEEHHCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
DDLADLTGRAYVLVEKILEPGEKLPRSWATQGTTGYDGLALVDRVLTDPTGQAPLDRLEA
HHHHHHCCCHHHHHHHHHCCHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
RLRGAPVDWPDLIHGTKRAVADGILQSEVRRIVREIGPEDPAPYRDAVAELLTCFPVYRS
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
YLPEGRDHLAEAFARARRTRPDLAATYDALEPVLTDAASPPALRFQQTSGMVMAKGVEDC
HCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCHHH
AFYRWSRLTSLTEVGGDPSVFAVTVAGFHEAMAARQRDWPHTMNTLSTHDTKRGEDVRAR
HHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHH
ITALAEMPDTWAAALERLLALAPVPDPGFGSLLWQAVLGAWTPEHLPDLRDRLHGYAEKA
HHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHH
MREAGDRTTWTEPDATYEAAVHAAVDAAFDSTDVRAVLADLAARIDAPGRSNSLAAKLVA
HHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHEEEEE
ITMPGVPDVYQGSELFETSLVDPDNRRPVDFDHRAAVLAGTDADDAVDKLHVTCSALTLR
EECCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHC
RDRPELFTTYAAVPATGTAADHVLAFDRGGAISVATRLPVGLAARGGWGDTVLELPAGRW
CCCCHHHHHHHCCCCCCCCHHHEEEECCCCCEEEHHHCCCCEECCCCCCCCEEECCCCCC
HDVLTGSSTEGRLADLLAALPVAMLVRAD
HHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8605217; 8611744 [H]