| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714522
Identifier: 119714522
GI number: 119714522
Start: 272737
End: 274059
Strand: Reverse
Name: 119714522
Synonym: Noca_0255
Alternate gene names: NA
Gene position: 274059-272737 (Counterclockwise)
Preceding gene: 119714523
Following gene: 119714515
Centisome position: 5.5
GC content: 71.2
Gene sequence:
>1323_bases GTGCTGCACCATGCGGAGGTGACCGCCACCACGCCGGCGCCGCGTTCCGCGCTGGCTGAGCCGACGACGAAGCCGCCCGG CCGTTGGATCGCCGCGATCACGCTGGCCAGCATCGGGCTCTGGGCCGGCTTCTTCGGGCCGATCCAGGTGCTGCTCGCCC AGCAGGCCGAGGCGATCGCCCCGGACGACAAGAAGGTCGTCCTCTCCGTCGTCCTCGGCCTCGGCGCCTTCGTCTCGGTG GTCTGCAACCCGGTGTTCGGTGCCTTCTCCGACCGCACCACCCTGAGGGCCGGCCGACGGCTGCCCTGGATCGCGGGGGG TGCCGTCGGCGGGGCACTGTCGCTGCTGCTCCTCTCGGTCGCCGACAACGTCGTCGTGATGGCGATCGGCTGGTGCGGCG TGCAGGCGACCCTCAATGCCATGCTGGCTGCGGTCACCGCGACCGTGCCCGACCAGGTCCCCGTGGGCGAGCGCGGCCGG GTCGGAGGAATCCTCGCGGTCGCCCAGACCGTCGGCGTGGTGGGCGGAACCGGCATCGCGTCGGCGACCGGCAGCATCGC GGCCGGGTACGTCGTCACCGCCGGCGTGCTGATCGTGCTGACGCTGCCGTACTGCGTCGGCTCCCGCGACGTCCCGCTGG CCCCCGACGAGCTGCCGCCGCCGTTCGACTGGGGCGGGTTCCTGCGTTCCTTCTGGGTCTCGCCGCGCCGGCACCCGGAC TTCGCGTGGGCCTGGATCACCCGCTTCCTGGTCAACCTCGGCAACGCGCTCGGCCTGCTCTACCTCCTCTACTACCTGCA GGACGTGATCGGCGTCGACAAGGACGAGGCCGACGACCGGGTGTTCCTGCTGACCGCGATCTACGCGGCCGTGATCATGG CGACCACGGTCGTCTTCGGCGTCTGGAGCGACCGGACCGGCAAGCGCAAGGTGTTCGTGATCTGGTCCGGCGTGGTCGGC TCGCTCGCCTCGCTGCTGCTCGCGGTCGGCCAGACCTGGCCCGCCGCCGTGGCGGCGGCGGTGCTGATGGGCGTCGGCTA CGGGATCTACACCTCGGTCGACTTCGCCCTGATCACCCAGGTGCTGCCCGGCGCCGAGGACCGCGCCAAGGACCTGGGCG TCATCAACATCGCCAACGCGCTGCCCCAGGTGTTCGCGCCGTTCATCGCCGCCGTGATCCTGCTGGTCGTCGAGGCCGCA GGCGGGGTGACCGAGACCGGCGGCGACCGCTTCTCCGTCGGCTATTGCGTGCTGTACTCCGTCGCGTTCCTGGTCGCCGT CCTCGGCTCGGTGTTCGTCACCAAGATTCGCTCGGTTCCGTAG
Upstream 100 bases:
>100_bases GGGACGTCACGGGGGTCGGCTGCCCGTCGTCCATCGGGTGATGCGTGGTGGCTGACCCGGCCGGGGTTTCCCAGCCATTT CCCGTCCCGCGACGGGGCGG
Downstream 100 bases:
>100_bases CTGGTCCGCAGCGGCTCGTTGTAACGCCGTGTTACCCCTTCCTCCCACCATGCTGCAGCACCCCGGGAAGAAGGGGTAAC ACGGCGTTACAGCCGATGGG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Permease; Efflux Transporter; Facilitator Sugar Transporter; Sucrose Symporter; Transporter Facilitator Family; Facilitator Superfamily; Florfenicol/Chloramphenicol Resistance Transporter Protein; Sugar Transporter; Sugar Permease; Sucrose Transporter; Transporter Facilitator Superfamily; MFS Superfamily Transporter
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIAPDDKKVVLSVVLGLGAFVSV VCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSVADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGR VGGILAVAQTVGVVGGTGIASATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFGVWSDRTGKRKVFVIWSGVVG SLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQVLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAA GGVTETGGDRFSVGYCVLYSVAFLVAVLGSVFVTKIRSVP
Sequences:
>Translated_440_residues MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIAPDDKKVVLSVVLGLGAFVSV VCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSVADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGR VGGILAVAQTVGVVGGTGIASATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFGVWSDRTGKRKVFVIWSGVVG SLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQVLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAA GGVTETGGDRFSVGYCVLYSVAFLVAVLGSVFVTKIRSVP >Mature_440_residues MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIAPDDKKVVLSVVLGLGAFVSV VCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSVADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGR VGGILAVAQTVGVVGGTGIASATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFGVWSDRTGKRKVFVIWSGVVG SLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQVLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAA GGVTETGGDRFSVGYCVLYSVAFLVAVLGSVFVTKIRSVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45795; Mature: 45795
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIA CCCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDDKKVVLSVVLGLGAFVSVVCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEECCHHHHHHHHHHHHH ADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGRVGGILAVAQTVGVVGGTGIA HCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH SATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VWSDRTGKRKVFVIWSGVVGSLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQ CCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH VLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAAGGVTETGGDRFSVGYCVLYS HCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VAFLVAVLGSVFVTKIRSVP HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIA CCCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PDDKKVVLSVVLGLGAFVSVVCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSV CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEECCHHHHHHHHHHHHH ADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGRVGGILAVAQTVGVVGGTGIA HCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH SATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VWSDRTGKRKVFVIWSGVVGSLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQ CCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH VLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAAGGVTETGGDRFSVGYCVLYS HCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VAFLVAVLGSVFVTKIRSVP HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA