Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714522

Identifier: 119714522

GI number: 119714522

Start: 272737

End: 274059

Strand: Reverse

Name: 119714522

Synonym: Noca_0255

Alternate gene names: NA

Gene position: 274059-272737 (Counterclockwise)

Preceding gene: 119714523

Following gene: 119714515

Centisome position: 5.5

GC content: 71.2

Gene sequence:

>1323_bases
GTGCTGCACCATGCGGAGGTGACCGCCACCACGCCGGCGCCGCGTTCCGCGCTGGCTGAGCCGACGACGAAGCCGCCCGG
CCGTTGGATCGCCGCGATCACGCTGGCCAGCATCGGGCTCTGGGCCGGCTTCTTCGGGCCGATCCAGGTGCTGCTCGCCC
AGCAGGCCGAGGCGATCGCCCCGGACGACAAGAAGGTCGTCCTCTCCGTCGTCCTCGGCCTCGGCGCCTTCGTCTCGGTG
GTCTGCAACCCGGTGTTCGGTGCCTTCTCCGACCGCACCACCCTGAGGGCCGGCCGACGGCTGCCCTGGATCGCGGGGGG
TGCCGTCGGCGGGGCACTGTCGCTGCTGCTCCTCTCGGTCGCCGACAACGTCGTCGTGATGGCGATCGGCTGGTGCGGCG
TGCAGGCGACCCTCAATGCCATGCTGGCTGCGGTCACCGCGACCGTGCCCGACCAGGTCCCCGTGGGCGAGCGCGGCCGG
GTCGGAGGAATCCTCGCGGTCGCCCAGACCGTCGGCGTGGTGGGCGGAACCGGCATCGCGTCGGCGACCGGCAGCATCGC
GGCCGGGTACGTCGTCACCGCCGGCGTGCTGATCGTGCTGACGCTGCCGTACTGCGTCGGCTCCCGCGACGTCCCGCTGG
CCCCCGACGAGCTGCCGCCGCCGTTCGACTGGGGCGGGTTCCTGCGTTCCTTCTGGGTCTCGCCGCGCCGGCACCCGGAC
TTCGCGTGGGCCTGGATCACCCGCTTCCTGGTCAACCTCGGCAACGCGCTCGGCCTGCTCTACCTCCTCTACTACCTGCA
GGACGTGATCGGCGTCGACAAGGACGAGGCCGACGACCGGGTGTTCCTGCTGACCGCGATCTACGCGGCCGTGATCATGG
CGACCACGGTCGTCTTCGGCGTCTGGAGCGACCGGACCGGCAAGCGCAAGGTGTTCGTGATCTGGTCCGGCGTGGTCGGC
TCGCTCGCCTCGCTGCTGCTCGCGGTCGGCCAGACCTGGCCCGCCGCCGTGGCGGCGGCGGTGCTGATGGGCGTCGGCTA
CGGGATCTACACCTCGGTCGACTTCGCCCTGATCACCCAGGTGCTGCCCGGCGCCGAGGACCGCGCCAAGGACCTGGGCG
TCATCAACATCGCCAACGCGCTGCCCCAGGTGTTCGCGCCGTTCATCGCCGCCGTGATCCTGCTGGTCGTCGAGGCCGCA
GGCGGGGTGACCGAGACCGGCGGCGACCGCTTCTCCGTCGGCTATTGCGTGCTGTACTCCGTCGCGTTCCTGGTCGCCGT
CCTCGGCTCGGTGTTCGTCACCAAGATTCGCTCGGTTCCGTAG

Upstream 100 bases:

>100_bases
GGGACGTCACGGGGGTCGGCTGCCCGTCGTCCATCGGGTGATGCGTGGTGGCTGACCCGGCCGGGGTTTCCCAGCCATTT
CCCGTCCCGCGACGGGGCGG

Downstream 100 bases:

>100_bases
CTGGTCCGCAGCGGCTCGTTGTAACGCCGTGTTACCCCTTCCTCCCACCATGCTGCAGCACCCCGGGAAGAAGGGGTAAC
ACGGCGTTACAGCCGATGGG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Transporter; Facilitator Superfamily Protein; Facilitator Superfamily Permease; Efflux Transporter; Facilitator Sugar Transporter; Sucrose Symporter; Transporter Facilitator Family; Facilitator Superfamily; Florfenicol/Chloramphenicol Resistance Transporter Protein; Sugar Transporter; Sugar Permease; Sucrose Transporter; Transporter Facilitator Superfamily; MFS Superfamily Transporter

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIAPDDKKVVLSVVLGLGAFVSV
VCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSVADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGR
VGGILAVAQTVGVVGGTGIASATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD
FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFGVWSDRTGKRKVFVIWSGVVG
SLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQVLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAA
GGVTETGGDRFSVGYCVLYSVAFLVAVLGSVFVTKIRSVP

Sequences:

>Translated_440_residues
MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIAPDDKKVVLSVVLGLGAFVSV
VCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSVADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGR
VGGILAVAQTVGVVGGTGIASATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD
FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFGVWSDRTGKRKVFVIWSGVVG
SLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQVLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAA
GGVTETGGDRFSVGYCVLYSVAFLVAVLGSVFVTKIRSVP
>Mature_440_residues
MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIAPDDKKVVLSVVLGLGAFVSV
VCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSVADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGR
VGGILAVAQTVGVVGGTGIASATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD
FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFGVWSDRTGKRKVFVIWSGVVG
SLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQVLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAA
GGVTETGGDRFSVGYCVLYSVAFLVAVLGSVFVTKIRSVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45795; Mature: 45795

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIA
CCCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDDKKVVLSVVLGLGAFVSVVCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEECCHHHHHHHHHHHHH
ADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGRVGGILAVAQTVGVVGGTGIA
HCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
SATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VWSDRTGKRKVFVIWSGVVGSLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQ
CCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAAGGVTETGGDRFSVGYCVLYS
HCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
VAFLVAVLGSVFVTKIRSVP
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLHHAEVTATTPAPRSALAEPTTKPPGRWIAAITLASIGLWAGFFGPIQVLLAQQAEAIA
CCCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDDKKVVLSVVLGLGAFVSVVCNPVFGAFSDRTTLRAGRRLPWIAGGAVGGALSLLLLSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEECCHHHHHHHHHHHHH
ADNVVVMAIGWCGVQATLNAMLAAVTATVPDQVPVGERGRVGGILAVAQTVGVVGGTGIA
HCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHH
SATGSIAAGYVVTAGVLIVLTLPYCVGSRDVPLAPDELPPPFDWGGFLRSFWVSPRRHPD
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
FAWAWITRFLVNLGNALGLLYLLYYLQDVIGVDKDEADDRVFLLTAIYAAVIMATTVVFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VWSDRTGKRKVFVIWSGVVGSLASLLLAVGQTWPAAVAAAVLMGVGYGIYTSVDFALITQ
CCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VLPGAEDRAKDLGVINIANALPQVFAPFIAAVILLVVEAAGGVTETGGDRFSVGYCVLYS
HCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
VAFLVAVLGSVFVTKIRSVP
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA