| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714515
Identifier: 119714515
GI number: 119714515
Start: 260989
End: 261486
Strand: Reverse
Name: 119714515
Synonym: Noca_0248
Alternate gene names: NA
Gene position: 261486-260989 (Counterclockwise)
Preceding gene: 119714522
Following gene: 119714514
Centisome position: 5.24
GC content: 75.5
Gene sequence:
>498_bases ATGAAGCGCCTCCTCCTCCCGCTCGGCGGCCTCGCGCTGGTCTGCTCGGGCTTCGGGGCCGGCATCGCCGTGTCCGCCAC CGCCGCCGACGACGCAGACCGCGCAGCCCCGGTCGTGGTCACCCGTGAGCCCCTGGCCGAGGTCACCGCGCCGCCCGGTG CGCCGCACCGCACGCTCGGGCTGAGCAAGGTCGTGGTGATGCCGGGCGCCCGGCTCGCCGCGCACCACCACCCCGGCGCC CAGCTCGGCTACGTCGCCGAGGGCACGCTGACCTACACGGTCGAGTCGGGCCAGGCCCGGCTGATGAAGGGCCCCGGCGA CGACGCCACCCTGGTCCGCACGATCGACCCCGGCGAGACCGTCAAGGTGCGCCCCGGCCGGTGGCTGGTCGAGGAGCAGG GCGAGGTCCACCACGCCCGCAACGCCGGAACCACCCCCATCGTCATCTACATCGCCACCCTGCTGCGCACCGGCGCGCCG GCGGCCATCGCCGATTGA
Upstream 100 bases:
>100_bases TCGGGGAGCACCCCGGGACCGACCCTGGGACCTGATCAGGGGACCCCGGGTTCGACGGATCGGCTGCGACGGCCGGCGTC CGCTCCCTACGCTCCCGGAC
Downstream 100 bases:
>100_bases CCACCAGCCCGACGGCGGAGGGCATACTCGGGGAGCGGGCCCGGCGGGAGGCCGGCCCGCGGCTCGGCGGGAGGGCGGAG ACGGTGGTCGACACCGAGGT
Product: cupin 2 domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKRLLLPLGGLALVCSGFGAGIAVSATAADDADRAAPVVVTREPLAEVTAPPGAPHRTLGLSKVVVMPGARLAAHHHPGA QLGYVAEGTLTYTVESGQARLMKGPGDDATLVRTIDPGETVKVRPGRWLVEEQGEVHHARNAGTTPIVIYIATLLRTGAP AAIAD
Sequences:
>Translated_165_residues MKRLLLPLGGLALVCSGFGAGIAVSATAADDADRAAPVVVTREPLAEVTAPPGAPHRTLGLSKVVVMPGARLAAHHHPGA QLGYVAEGTLTYTVESGQARLMKGPGDDATLVRTIDPGETVKVRPGRWLVEEQGEVHHARNAGTTPIVIYIATLLRTGAP AAIAD >Mature_165_residues MKRLLLPLGGLALVCSGFGAGIAVSATAADDADRAAPVVVTREPLAEVTAPPGAPHRTLGLSKVVVMPGARLAAHHHPGA QLGYVAEGTLTYTVESGQARLMKGPGDDATLVRTIDPGETVKVRPGRWLVEEQGEVHHARNAGTTPIVIYIATLLRTGAP AAIAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16975; Mature: 16975
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLPLGGLALVCSGFGAGIAVSATAADDADRAAPVVVTREPLAEVTAPPGAPHRTLG CCEEECCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCC LSKVVVMPGARLAAHHHPGAQLGYVAEGTLTYTVESGQARLMKGPGDDATLVRTIDPGET CEEEEEECCCEEEECCCCCCCCCEEECCEEEEEEECCCEEEEECCCCCCEEEEEECCCCE VKVRPGRWLVEEQGEVHHARNAGTTPIVIYIATLLRTGAPAAIAD EEECCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRLLLPLGGLALVCSGFGAGIAVSATAADDADRAAPVVVTREPLAEVTAPPGAPHRTLG CCEEECCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCHHHHCCCCCCCCCCCC LSKVVVMPGARLAAHHHPGAQLGYVAEGTLTYTVESGQARLMKGPGDDATLVRTIDPGET CEEEEEECCCEEEECCCCCCCCCEEECCEEEEEEECCCEEEEECCCCCCEEEEEECCCCE VKVRPGRWLVEEQGEVHHARNAGTTPIVIYIATLLRTGAPAAIAD EEECCCEEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA