| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is yehL [C]
Identifier: 119714506
GI number: 119714506
Start: 252857
End: 253732
Strand: Reverse
Name: yehL [C]
Synonym: Noca_0239
Alternate gene names: 119714506
Gene position: 253732-252857 (Counterclockwise)
Preceding gene: 119714507
Following gene: 119714505
Centisome position: 5.09
GC content: 71.12
Gene sequence:
>876_bases ATGAGTAGACCGGGGGGCGTCGCCGAGCTGACCGACGCACTCCGCGTCGATGGGTACCTCGCCGACCGCGGGCTCTCCAC GGCGACCTACGTCGCCCTCGCTCTCGACCGTCCCCTCCTGCTCGAGGGCGAGGTCGGCACCGGCAAGACCGAGATCGCCA AGGCGCTGTCCCGGGTACTCGGCCGGCGTCTGATCCGGCTCCAGTGCTACGAGGGCATCGACACCAACCAGGCGCTCTAC GAGTGGGACTACGCACGACAGCTGCTGCAGATCCGGGCGCTGTCCGACCGCAGCCTCGACGACGAGGCCGCGGTGGACGC GCTGTTCGGCCCGAAGTTCCTGCTGGAGCGGCCGCTGCTGGACGCCGTGCGTGCGGGCGACCGGGCCGTGCTCCTGGTCG ACGAGGTCGACCGCGCGGACGACGAGTTCGAGGCGTTCCTGCTGGAGCTGCTGTCCGACTTCCAGATCACCATCCCCGAG GTCGGGACGATCGTGGCCGAGCGACCACCGCTCGTCGTACTGACCTCGAACCGGACCCGGGAGCTGCACGACGCGCTGAA GCGCCGCTGCCTCTACCACTGGGTCGACCACCCCGACGCCGAGCGGGAGCTCGAGATCGTGCTGGTGCGGGTGCCCGGCG TCGCCGAGTCGCTGGCCCGCAAGGTGGTCACCGCCGTGCAGCGGCTGCGCCAGCTCGACCTGGCCAAGCCGCCCGGCGTC GCGGAGACCATCGACTGGGTGCGCACCCTCGACGTGGTCGGCGCCGACGACCTGGACCCGCAGACTATCGAGGACACCCT CGGCGCGGTCGTGAAGGAGCACGACGACCTCGACGTCGTCCGGGCCCACGTGCACGAGCTGGCTCCCGGTGGCTGA
Upstream 100 bases:
>100_bases GCGCGACCTGCTCGCCCGCGAGGGCAAGCTCGGCACCGGGGAGACGATCCGCGACCTGGTGCTCGGCCGGGACGCATGAG CGAGCGCAGCGATCACGTGC
Downstream 100 bases:
>100_bases GTCGGCCGAACCGGACCCGGGGCACGCGTTCGTCGAGACGCTGGTCGGCTTCGCTCGCGAGCTGCGGGCGGCCGGGCTGC CGGTGGGAACCGGTGACGGC
Product: ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; AAA Family ATPase; AAA_5 ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; ATPase Central Domain-Containing Protein; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; Aaa ATPase; ATPase-Like Protein; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; AAA ATPase Central RegionATPase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSRPGGVAELTDALRVDGYLADRGLSTATYVALALDRPLLLEGEVGTGKTEIAKALSRVLGRRLIRLQCYEGIDTNQALY EWDYARQLLQIRALSDRSLDDEAAVDALFGPKFLLERPLLDAVRAGDRAVLLVDEVDRADDEFEAFLLELLSDFQITIPE VGTIVAERPPLVVLTSNRTRELHDALKRRCLYHWVDHPDAERELEIVLVRVPGVAESLARKVVTAVQRLRQLDLAKPPGV AETIDWVRTLDVVGADDLDPQTIEDTLGAVVKEHDDLDVVRAHVHELAPGG
Sequences:
>Translated_291_residues MSRPGGVAELTDALRVDGYLADRGLSTATYVALALDRPLLLEGEVGTGKTEIAKALSRVLGRRLIRLQCYEGIDTNQALY EWDYARQLLQIRALSDRSLDDEAAVDALFGPKFLLERPLLDAVRAGDRAVLLVDEVDRADDEFEAFLLELLSDFQITIPE VGTIVAERPPLVVLTSNRTRELHDALKRRCLYHWVDHPDAERELEIVLVRVPGVAESLARKVVTAVQRLRQLDLAKPPGV AETIDWVRTLDVVGADDLDPQTIEDTLGAVVKEHDDLDVVRAHVHELAPGG >Mature_290_residues SRPGGVAELTDALRVDGYLADRGLSTATYVALALDRPLLLEGEVGTGKTEIAKALSRVLGRRLIRLQCYEGIDTNQALYE WDYARQLLQIRALSDRSLDDEAAVDALFGPKFLLERPLLDAVRAGDRAVLLVDEVDRADDEFEAFLLELLSDFQITIPEV GTIVAERPPLVVLTSNRTRELHDALKRRCLYHWVDHPDAERELEIVLVRVPGVAESLARKVVTAVQRLRQLDLAKPPGVA ETIDWVRTLDVVGADDLDPQTIEDTLGAVVKEHDDLDVVRAHVHELAPGG
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32245; Mature: 32114
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPGGVAELTDALRVDGYLADRGLSTATYVALALDRPLLLEGEVGTGKTEIAKALSRVL CCCCCCHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH GRRLIRLQCYEGIDTNQALYEWDYARQLLQIRALSDRSLDDEAAVDALFGPKFLLERPLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH DAVRAGDRAVLLVDEVDRADDEFEAFLLELLSDFQITIPEVGTIVAERPPLVVLTSNRTR HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCHHHHEECCCCEEEEECCCCH ELHDALKRRCLYHWVDHPDAERELEIVLVRVPGVAESLARKVVTAVQRLRQLDLAKPPGV HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCH AETIDWVRTLDVVGADDLDPQTIEDTLGAVVKEHDDLDVVRAHVHELAPGG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure SRPGGVAELTDALRVDGYLADRGLSTATYVALALDRPLLLEGEVGTGKTEIAKALSRVL CCCCCHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH GRRLIRLQCYEGIDTNQALYEWDYARQLLQIRALSDRSLDDEAAVDALFGPKFLLERPLL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHH DAVRAGDRAVLLVDEVDRADDEFEAFLLELLSDFQITIPEVGTIVAERPPLVVLTSNRTR HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEECCCHHHHEECCCCEEEEECCCCH ELHDALKRRCLYHWVDHPDAERELEIVLVRVPGVAESLARKVVTAVQRLRQLDLAKPPGV HHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCH AETIDWVRTLDVVGADDLDPQTIEDTLGAVVKEHDDLDVVRAHVHELAPGG HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA