| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714505
Identifier: 119714505
GI number: 119714505
Start: 251737
End: 252864
Strand: Reverse
Name: 119714505
Synonym: Noca_0238
Alternate gene names: NA
Gene position: 252864-251737 (Counterclockwise)
Preceding gene: 119714506
Following gene: 119714504
Centisome position: 5.07
GC content: 74.11
Gene sequence:
>1128_bases GTGGCTGAGTCGGCCGAACCGGACCCGGGGCACGCGTTCGTCGAGACGCTGGTCGGCTTCGCTCGCGAGCTGCGGGCGGC CGGGCTGCCGGTGGGAACCGGTGACGGCGTGACGTTCTGCGCGGCGATGGAGCCCCTCGACCCGACCGACCTGATGGACC TCTACTGGGGCGGTCGGGCGACGCTGGTGACCCGGCGCGAGCAGATCCCGACGTACCACGAGACGTTCCTGCGCTACTTC CTCGACCACCCCGCCCCGAAGCCCGACGAGGCGCGGCCGTTCACGATCCAGCAGCGCGAGGAGGCGCGCACCGCGCTACA GGTGCCGGAGACCGAGCAGCACGGCGAGGAGCGGCAGGAGGAGGAGGCGATCCTCGGGCTGATGGCCTCGGACGTGTCCG CGCTCAAGCACAAGGCGTTCGCGTCCTGTACACCGGAGGAACTGGCCGCGCTGCGCCGGATCATGCGCACCGTCCGGCTC ACCCCGCCCCGCCGCCGCTCGCGGCGGACCGCTGCCGCATCGGCCGGGACGCGACCGGACCTGCGCCGCACCGTCCGGGA GGCGATGCGCACCCACGGTGACCCCGCGAGGCTGCGCTGGCGGCAGCGACGGAAGCGGCCGCGGCCGCTGGTGCTGGTGC TCGACGTGTCCGGGTCGATGGCCGACTACTCGCGGGCGCTGCTGCAGTACGCACACATCACCTCGCGCGCGACCAGCAAG GTCGAGGTGTTCTGCTTCGGCACCCGGCTCACCCGGATCACCCGCGAGCTCGAGCACCGACGGCCGGATCAGGCGCTCGA CCGCGCGGCCCGCGCCGTCGTCGACTGGGAGGGTGGCACTCGCATCGGCGGCTCCCTCGACGCGTTCGTGCGCGACTTCG GCCGGCGCGGCACCGGCCGCGGCGGCATCGTGGTGATCTGCTCCGACGGCCTCGACCGGGGCGACCCGGCGCTGCTGGCG TCGGCGATGCAGCGGCTGTCCCGGCTCTGCCACCGGGTCGTGTGGCTCAACCCGCACGGCGCCGAGCCGGCCTCGCTCGG CATGGCCGTCGCCACGCCGTACGTCGACCAGGTGCTGACCGCCCGTAGCCTGGCCGACCTGGAGGCGTTCGCCCGGAGCC TGGGGTGA
Upstream 100 bases:
>100_bases GACCTGGACCCGCAGACTATCGAGGACACCCTCGGCGCGGTCGTGAAGGAGCACGACGACCTCGACGTCGTCCGGGCCCA CGTGCACGAGCTGGCTCCCG
Downstream 100 bases:
>100_bases TGCCGTCGTGATCAGGCTGGGCTCGCTCGCGGGCTACCCGTTCGACGGCCCGCGGGTGCTGGCCGGCTGGGCGCCGCCCG CGGTCCCGGCGGTGTACGCG
Product: VWA containing CoxE family protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; VWA Domain Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Von Willebrand Factor Type A Domain-Containing Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAESAEPDPGHAFVETLVGFARELRAAGLPVGTGDGVTFCAAMEPLDPTDLMDLYWGGRATLVTRREQIPTYHETFLRYF LDHPAPKPDEARPFTIQQREEARTALQVPETEQHGEERQEEEAILGLMASDVSALKHKAFASCTPEELAALRRIMRTVRL TPPRRRSRRTAAASAGTRPDLRRTVREAMRTHGDPARLRWRQRRKRPRPLVLVLDVSGSMADYSRALLQYAHITSRATSK VEVFCFGTRLTRITRELEHRRPDQALDRAARAVVDWEGGTRIGGSLDAFVRDFGRRGTGRGGIVVICSDGLDRGDPALLA SAMQRLSRLCHRVVWLNPHGAEPASLGMAVATPYVDQVLTARSLADLEAFARSLG
Sequences:
>Translated_375_residues MAESAEPDPGHAFVETLVGFARELRAAGLPVGTGDGVTFCAAMEPLDPTDLMDLYWGGRATLVTRREQIPTYHETFLRYF LDHPAPKPDEARPFTIQQREEARTALQVPETEQHGEERQEEEAILGLMASDVSALKHKAFASCTPEELAALRRIMRTVRL TPPRRRSRRTAAASAGTRPDLRRTVREAMRTHGDPARLRWRQRRKRPRPLVLVLDVSGSMADYSRALLQYAHITSRATSK VEVFCFGTRLTRITRELEHRRPDQALDRAARAVVDWEGGTRIGGSLDAFVRDFGRRGTGRGGIVVICSDGLDRGDPALLA SAMQRLSRLCHRVVWLNPHGAEPASLGMAVATPYVDQVLTARSLADLEAFARSLG >Mature_374_residues AESAEPDPGHAFVETLVGFARELRAAGLPVGTGDGVTFCAAMEPLDPTDLMDLYWGGRATLVTRREQIPTYHETFLRYFL DHPAPKPDEARPFTIQQREEARTALQVPETEQHGEERQEEEAILGLMASDVSALKHKAFASCTPEELAALRRIMRTVRLT PPRRRSRRTAAASAGTRPDLRRTVREAMRTHGDPARLRWRQRRKRPRPLVLVLDVSGSMADYSRALLQYAHITSRATSKV EVFCFGTRLTRITRELEHRRPDQALDRAARAVVDWEGGTRIGGSLDAFVRDFGRRGTGRGGIVVICSDGLDRGDPALLAS AMQRLSRLCHRVVWLNPHGAEPASLGMAVATPYVDQVLTARSLADLEAFARSLG
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41691; Mature: 41560
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESAEPDPGHAFVETLVGFARELRAAGLPVGTGDGVTFCAAMEPLDPTDLMDLYWGGRA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCE TLVTRREQIPTYHETFLRYFLDHPAPKPDEARPFTIQQREEARTALQVPETEQHGEERQE EEEECHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH EEAILGLMASDVSALKHKAFASCTPEELAALRRIMRTVRLTPPRRRSRRTAAASAGTRPD HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH LRRTVREAMRTHGDPARLRWRQRRKRPRPLVLVLDVSGSMADYSRALLQYAHITSRATSK HHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC VEVFCFGTRLTRITRELEHRRPDQALDRAARAVVDWEGGTRIGGSLDAFVRDFGRRGTGR EEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCC GGIVVICSDGLDRGDPALLASAMQRLSRLCHRVVWLNPHGAEPASLGMAVATPYVDQVLT CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHHHHHHH ARSLADLEAFARSLG HHHHHHHHHHHHHCC >Mature Secondary Structure AESAEPDPGHAFVETLVGFARELRAAGLPVGTGDGVTFCAAMEPLDPTDLMDLYWGGRA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCE TLVTRREQIPTYHETFLRYFLDHPAPKPDEARPFTIQQREEARTALQVPETEQHGEERQE EEEECHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH EEAILGLMASDVSALKHKAFASCTPEELAALRRIMRTVRLTPPRRRSRRTAAASAGTRPD HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH LRRTVREAMRTHGDPARLRWRQRRKRPRPLVLVLDVSGSMADYSRALLQYAHITSRATSK HHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC VEVFCFGTRLTRITRELEHRRPDQALDRAARAVVDWEGGTRIGGSLDAFVRDFGRRGTGR EEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHCCCCCCC GGIVVICSDGLDRGDPALLASAMQRLSRLCHRVVWLNPHGAEPASLGMAVATPYVDQVLT CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHHHHHHH ARSLADLEAFARSLG HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA