| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is sphX [H]
Identifier: 119714459
GI number: 119714459
Start: 204621
End: 205559
Strand: Direct
Name: sphX [H]
Synonym: Noca_0192
Alternate gene names: 119714459
Gene position: 204621-205559 (Clockwise)
Preceding gene: 119714455
Following gene: 119714460
Centisome position: 4.1
GC content: 66.56
Gene sequence:
>939_bases GTGAGGCCACGCCACTCCCTCTTGGCCGCGATGGCAGGGGTCGCCATCACACTGGCGGCCTGCGGAGGCAGCGCCGAACA GGACACGGACGCTGCGTCGACCGGGGTCGTGATCGTCGACGGCTCGTCCACCGTCTACCCGATGAGCGAGGCCGCCTACC AGCTGATGAGCGGGGAGTACCCCGACATCCACGTGAGCGTCACGGCGTCGGGCACCGGAGGCGGCTTCGCGAAGTTCTGC GTCGGCGAGACCCATATCTCCAATGCGTCGCGACCGATCGACCCGGACGAAACGAAGCTCTGCGAGGAGAACGGTGTTGC GTACACCGAGCTCCAGGTCGGGATCGATGCGTTGACTGTCGTCGTCCACCCGCGGCTCGGCGTGGACTGCCTCACGACCG ACCAGCTGGTCGAGCTCTGGCGACCGGGAGCGGACGTCGCTCGCTGGAACGACCTCGACCCGAGTTTTCCGGACCAGAAG GTGGTCCTGTTCGGCCCCGGCACGGACTCCGGCACCTACGACTACCTAGCGGACGTCATCGGGGACCCCTCGGAGGCGAC CCGAGACGACTACGAGTCCTCCGAGGACGACAACGTCCTGGTCCAGGGTGTCGCCGGTACCCCGGGTGCCACGGGCTACT TCGGGTACACCTACTACGAGGAGTACGCCGATGCGCTCAAGGCGGTCGCCATCGACGACGGGAACGGCTGCGTCGCACCC TCGGCCAGGACGGCCGGCACCGGCAAGTACACACCGCTGTCGCGCCCGCTCTTCATCTACGTCAACGATCGGTCCTATGC CGAGAACACCGCGGTGAAGCGCTACACGGACTTCTACATCGCGAACCTCAGCACGATCGCTCACGCGGCTCAGTTCATCG ACCTGAACGAAGCCCAAAACGCCGAGACCCGCGAGGCCCTGGAGGGCATGCGCGGTTGA
Upstream 100 bases:
>100_bases CGTTCATGCGGGGTTCATCCCAAACGTCCGACGCCCGCTCCGCTCCGCCCTACGCTCGCGATGCGAGTTCCGCGACGGGA CAAGGATCAGGAGAATCGAC
Downstream 100 bases:
>100_bases GCGCCCGAGCGACCTTCCGGCCCGGTCCGACCCGGCCGGCCTCGCCACTTGGTCGCCGTCCTGTCGTTGCCACCGGCATG AGGTCCGGCCCGTCCCTGTC
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRPRHSLLAAMAGVAITLAACGGSAEQDTDAASTGVVIVDGSSTVYPMSEAAYQLMSGEYPDIHVSVTASGTGGGFAKFC VGETHISNASRPIDPDETKLCEENGVAYTELQVGIDALTVVVHPRLGVDCLTTDQLVELWRPGADVARWNDLDPSFPDQK VVLFGPGTDSGTYDYLADVIGDPSEATRDDYESSEDDNVLVQGVAGTPGATGYFGYTYYEEYADALKAVAIDDGNGCVAP SARTAGTGKYTPLSRPLFIYVNDRSYAENTAVKRYTDFYIANLSTIAHAAQFIDLNEAQNAETREALEGMRG
Sequences:
>Translated_312_residues MRPRHSLLAAMAGVAITLAACGGSAEQDTDAASTGVVIVDGSSTVYPMSEAAYQLMSGEYPDIHVSVTASGTGGGFAKFC VGETHISNASRPIDPDETKLCEENGVAYTELQVGIDALTVVVHPRLGVDCLTTDQLVELWRPGADVARWNDLDPSFPDQK VVLFGPGTDSGTYDYLADVIGDPSEATRDDYESSEDDNVLVQGVAGTPGATGYFGYTYYEEYADALKAVAIDDGNGCVAP SARTAGTGKYTPLSRPLFIYVNDRSYAENTAVKRYTDFYIANLSTIAHAAQFIDLNEAQNAETREALEGMRG >Mature_312_residues MRPRHSLLAAMAGVAITLAACGGSAEQDTDAASTGVVIVDGSSTVYPMSEAAYQLMSGEYPDIHVSVTASGTGGGFAKFC VGETHISNASRPIDPDETKLCEENGVAYTELQVGIDALTVVVHPRLGVDCLTTDQLVELWRPGADVARWNDLDPSFPDQK VVLFGPGTDSGTYDYLADVIGDPSEATRDDYESSEDDNVLVQGVAGTPGATGYFGYTYYEEYADALKAVAIDDGNGCVAP SARTAGTGKYTPLSRPLFIYVNDRSYAENTAVKRYTDFYIANLSTIAHAAQFIDLNEAQNAETREALEGMRG
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33176; Mature: 33176
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPRHSLLAAMAGVAITLAACGGSAEQDTDAASTGVVIVDGSSTVYPMSEAAYQLMSGEY CCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHCCCC PDIHVSVTASGTGGGFAKFCVGETHISNASRPIDPDETKLCEENGVAYTELQVGIDALTV CCEEEEEEECCCCCCEEEEEECCHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEE VVHPRLGVDCLTTDQLVELWRPGADVARWNDLDPSFPDQKVVLFGPGTDSGTYDYLADVI EECCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH GDPSEATRDDYESSEDDNVLVQGVAGTPGATGYFGYTYYEEYADALKAVAIDDGNGCVAP CCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCEECC SARTAGTGKYTPLSRPLFIYVNDRSYAENTAVKRYTDFYIANLSTIAHAAQFIDLNEAQN CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC AETREALEGMRG CHHHHHHHHCCC >Mature Secondary Structure MRPRHSLLAAMAGVAITLAACGGSAEQDTDAASTGVVIVDGSSTVYPMSEAAYQLMSGEY CCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHCCCC PDIHVSVTASGTGGGFAKFCVGETHISNASRPIDPDETKLCEENGVAYTELQVGIDALTV CCEEEEEEECCCCCCEEEEEECCHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCCEEEEE VVHPRLGVDCLTTDQLVELWRPGADVARWNDLDPSFPDQKVVLFGPGTDSGTYDYLADVI EECCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHH GDPSEATRDDYESSEDDNVLVQGVAGTPGATGYFGYTYYEEYADALKAVAIDDGNGCVAP CCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCEECC SARTAGTGKYTPLSRPLFIYVNDRSYAENTAVKRYTDFYIANLSTIAHAAQFIDLNEAQN CCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC AETREALEGMRG CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]