| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714439
Identifier: 119714439
GI number: 119714439
Start: 185229
End: 185696
Strand: Direct
Name: 119714439
Synonym: Noca_0172
Alternate gene names: NA
Gene position: 185229-185696 (Clockwise)
Preceding gene: 119714438
Following gene: 119714441
Centisome position: 3.72
GC content: 75.0
Gene sequence:
>468_bases ATGAACCCGCTGCGCTGGCTGGCCCTGCGGCTGGGTGCCCAACCGTGGCTGCCCCGGTTCGCCCGGGTGATCGTCACCCT CGACCTGACGACCCAGCGGCTCAGCCGCGGCCGGGTGGACCTCCTGACCTTCGCGGGTCTGCCCGAGCTGCTGCTCCAGG TCCCGGGCCGGCGCACCGGCGTACTGCGCTCGACGCCGCTGCTGTGCGTCCCGCACGGCGACGGCTGGCTGGTGGCGGGC TCCAACTGGGGCGCGCCCACCCCTCCCGCCTGGGTCGCCAACGTGCTGGGCGCCGACGAGCCGCTGGTCACCTTCCGGGG CCACACCGTCGCCGCCGACGCCCTCCTGCTGACCGGCCCGGACCGTGACGAGGCCTGGGCGGTGATGACCGGCACCTGGC CGAACTACGCGAAGTACGCCGAGCGCACCGGCCGGGAGCTCCCCGTCATCCTCCTCACCCCCCGCTAG
Upstream 100 bases:
>100_bases GCATCCGCGGATGGCGCTGCGACCAGCAGCTCTCGCCCGAGGAGCTGGAGGCCGTCGCGAACGCCCGCCCTCGCGGCTGA GTGACGCCTATGCTCCGGCC
Downstream 100 bases:
>100_bases GCACTGAAGCAGCACGATGCGTCCCGGGGCGGCGGCCCGCAGCCTGTGCGCCCACCGAAACCACATCGTCGGGTGATCAC CCCGACACGCCAGCCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNPLRWLALRLGAQPWLPRFARVIVTLDLTTQRLSRGRVDLLTFAGLPELLLQVPGRRTGVLRSTPLLCVPHGDGWLVAG SNWGAPTPPAWVANVLGADEPLVTFRGHTVAADALLLTGPDRDEAWAVMTGTWPNYAKYAERTGRELPVILLTPR
Sequences:
>Translated_155_residues MNPLRWLALRLGAQPWLPRFARVIVTLDLTTQRLSRGRVDLLTFAGLPELLLQVPGRRTGVLRSTPLLCVPHGDGWLVAG SNWGAPTPPAWVANVLGADEPLVTFRGHTVAADALLLTGPDRDEAWAVMTGTWPNYAKYAERTGRELPVILLTPR >Mature_155_residues MNPLRWLALRLGAQPWLPRFARVIVTLDLTTQRLSRGRVDLLTFAGLPELLLQVPGRRTGVLRSTPLLCVPHGDGWLVAG SNWGAPTPPAWVANVLGADEPLVTFRGHTVAADALLLTGPDRDEAWAVMTGTWPNYAKYAERTGRELPVILLTPR
Specific function: May be involved in the activation of oxazole analogs [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deazaflavin-dependent nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004378 [H]
Pfam domain/function: PF04075 DUF385 [H]
EC number: NA
Molecular weight: Translated: 17019; Mature: 17019
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLRWLALRLGAQPWLPRFARVIVTLDLTTQRLSRGRVDLLTFAGLPELLLQVPGRRTG CCHHHHHHHHHCCCCCHHHHEEEEEEEECCHHHHHCCCEEEEECCCCHHHHHHCCCCCCC VLRSTPLLCVPHGDGWLVAGSNWGAPTPPAWVANVLGADEPLVTFRGHTVAADALLLTGP EEECCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCEEEECEEEEECC DRDEAWAVMTGTWPNYAKYAERTGRELPVILLTPR CCCCEEEEEECCCCCHHHHHHHCCCCCCEEEECCC >Mature Secondary Structure MNPLRWLALRLGAQPWLPRFARVIVTLDLTTQRLSRGRVDLLTFAGLPELLLQVPGRRTG CCHHHHHHHHHCCCCCHHHHEEEEEEEECCHHHHHCCCEEEEECCCCHHHHHHCCCCCCC VLRSTPLLCVPHGDGWLVAGSNWGAPTPPAWVANVLGADEPLVTFRGHTVAADALLLTGP EEECCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCCEEEECEEEEECC DRDEAWAVMTGTWPNYAKYAERTGRELPVILLTPR CCCCEEEEEECCCCCHHHHHHHCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]