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The map label for this gene is glpQ1 [H]

Identifier: 119714428

GI number: 119714428

Start: 175513

End: 176310

Strand: Direct

Name: glpQ1 [H]

Synonym: Noca_0161

Alternate gene names: 119714428

Gene position: 175513-176310 (Clockwise)

Preceding gene: 119714427

Following gene: 119714429

Centisome position: 3.52

GC content: 73.18

Gene sequence:

>798_bases
GTGAGGCCCCAGGTCGTCGCCCACCGCGGCGCCAGCTACGAGAACGCCGAGCACACCCTCGGCGCCTACATCGCCGCCCT
CGACGCCGGCGCCGACGCCGTCGAGTGCGACGTCCGGCTGACCGCGGACGGCCACCTGGTGTGCGTGCACGACCGCGACC
TGCGGCGTACGGCGCGGACCCGCGGCCTGGTCTCCACCATGGAGCTGGCCGAGCTCGACCAGCTCGACTTCGCCTCCTGG
AAGAACCCGTGGGCCGACCTCGACGACGAGGCGCCCCTGCGCGACGAGCGGCTCGACCGGGTGCTCACGCTGCGCACCCT
GCTCGAGACCATCGCCGACTACGACCGCCCGGTCGAGGTCGCGATCGAGACCAAGCACCCCACCCGGTACGGCGGCCTCG
TGGAGCGACGCCTGATCGAGCAGCTGCGCCGCTTCGGCTGGGACCGGCCGGGCGCACCGGTACGGGTGATGAGCTTCTCC
TGGACCGCGCTGCAGCGGGTCGAGCGGTTGGCCCCGGGCGTCCGGCTCGTGATGCTCCTCGAGCACGCCCGGAACTGGCC
GGCGCTGCGCCGTCTCGTCGGACCGGACTGGCTGGTCGGCCCGGGCATCGACGAGCTCATGGATCACCGGCGGCTCGGGC
CGCGGATCACCCGCAGCGGCCACGACCTGCACGTGTGGACCGTCAACACGCCGGTCGAGCTGGACCTGTGCCTGGAGCTC
GGGGTCAAGGCGGTGATCACCGACCGTCCGGCGTACGTGCGCGACCTGCTCGACCAGCGGGAGGCCGACCCCGGATAG

Upstream 100 bases:

>100_bases
ACGCCGACGACACCCTCGGCCCGCGGGGCACCGATGAGTGGCAGGCGTTCATCCGCGACTCCGAGGGCAACCTCGTGGGT
CTGGTCGAGCACCGGCCCCG

Downstream 100 bases:

>100_bases
CCTCTGCCGCATGGCGAAGAAGTCCCGCACCAAGGCCCGCGACCACCAGCCCGCCTCCGGCGAGGTCGGACCGCGGCAGC
CCTGCCCGTGCGGGTCCGGC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase 1 [H]

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRPQVVAHRGASYENAEHTLGAYIAALDAGADAVECDVRLTADGHLVCVHDRDLRRTARTRGLVSTMELAELDQLDFASW
KNPWADLDDEAPLRDERLDRVLTLRTLLETIADYDRPVEVAIETKHPTRYGGLVERRLIEQLRRFGWDRPGAPVRVMSFS
WTALQRVERLAPGVRLVMLLEHARNWPALRRLVGPDWLVGPGIDELMDHRRLGPRITRSGHDLHVWTVNTPVELDLCLEL
GVKAVITDRPAYVRDLLDQREADPG

Sequences:

>Translated_265_residues
MRPQVVAHRGASYENAEHTLGAYIAALDAGADAVECDVRLTADGHLVCVHDRDLRRTARTRGLVSTMELAELDQLDFASW
KNPWADLDDEAPLRDERLDRVLTLRTLLETIADYDRPVEVAIETKHPTRYGGLVERRLIEQLRRFGWDRPGAPVRVMSFS
WTALQRVERLAPGVRLVMLLEHARNWPALRRLVGPDWLVGPGIDELMDHRRLGPRITRSGHDLHVWTVNTPVELDLCLEL
GVKAVITDRPAYVRDLLDQREADPG
>Mature_265_residues
MRPQVVAHRGASYENAEHTLGAYIAALDAGADAVECDVRLTADGHLVCVHDRDLRRTARTRGLVSTMELAELDQLDFASW
KNPWADLDDEAPLRDERLDRVLTLRTLLETIADYDRPVEVAIETKHPTRYGGLVERRLIEQLRRFGWDRPGAPVRVMSFS
WTALQRVERLAPGVRLVMLLEHARNWPALRRLVGPDWLVGPGIDELMDHRRLGPRITRSGHDLHVWTVNTPVELDLCLEL
GVKAVITDRPAYVRDLLDQREADPG

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Escherichia coli, GI1789858, Length=249, Percent_Identity=25.7028112449799, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 30104; Mature: 30104

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPQVVAHRGASYENAEHTLGAYIAALDAGADAVECDVRLTADGHLVCVHDRDLRRTART
CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECHHHHHHHHH
RGLVSTMELAELDQLDFASWKNPWADLDDEAPLRDERLDRVLTLRTLLETIADYDRPVEV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
AIETKHPTRYGGLVERRLIEQLRRFGWDRPGAPVRVMSFSWTALQRVERLAPGVRLVMLL
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHH
EHARNWPALRRLVGPDWLVGPGIDELMDHRRLGPRITRSGHDLHVWTVNTPVELDLCLEL
HHHCCCHHHHHHCCCCCEECCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHC
GVKAVITDRPAYVRDLLDQREADPG
CCEEEEECCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRPQVVAHRGASYENAEHTLGAYIAALDAGADAVECDVRLTADGHLVCVHDRDLRRTART
CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEECHHHHHHHHH
RGLVSTMELAELDQLDFASWKNPWADLDDEAPLRDERLDRVLTLRTLLETIADYDRPVEV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEE
AIETKHPTRYGGLVERRLIEQLRRFGWDRPGAPVRVMSFSWTALQRVERLAPGVRLVMLL
EEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHCCHHHHHHHH
EHARNWPALRRLVGPDWLVGPGIDELMDHRRLGPRITRSGHDLHVWTVNTPVELDLCLEL
HHHCCCHHHHHHCCCCCEECCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHC
GVKAVITDRPAYVRDLLDQREADPG
CCEEEEECCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]