Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714422

Identifier: 119714422

GI number: 119714422

Start: 171243

End: 171833

Strand: Direct

Name: 119714422

Synonym: Noca_0155

Alternate gene names: NA

Gene position: 171243-171833 (Clockwise)

Preceding gene: 119714421

Following gene: 119714425

Centisome position: 3.43

GC content: 69.04

Gene sequence:

>591_bases
ATGACACGAGCACTGATCCTGCGACGGGGCGCTGTGGCGGTCGGCCTGGCGCTGATGGCCTCACTCTCGGCGTGCGGCGG
CGACGACGGCGGCGGCTCGGGCGCCAAGGCTCCGGACGATGCGTCCACCGACGACTTCTGTGCGACCTTCAACAGCCTCT
TCGAGAAGGTGCTGTCACAGGCGACCTCCGGCGACTCCGCCGCGGTGATCTCGGCGCTCAAGGACTGGGCGGCGGACATC
GAGGACGTCGGCACGCCCAGCGCGATGCCCGACGACGCCCGGCACGGCTTCGAGCTGTTCGTCGACCAGGCCAAGAAGCT
CGACGAGAACGCCAGCCTGGAGGACCTGCAGAACCTCGGCGACGACCTCAGCGCGGACGACCAGGCGGACGGGGAGGCGT
TCACCACCTGGACCGAGGAGAACTGCCCGCTCGACATCCCGGGCCTGGACGGCTCGGACCTGCCCAGCATCGACCCCTCG
GACCTGCCGAGCATCGATCCCTCGGACCTGGCCAGCATGGACCCCGAGGAGCTGGAGTCGATGATGTCCGAGCTCGCCTC
GAACATGAGCGAGCTGACGGAGAGCCCGTAG

Upstream 100 bases:

>100_bases
CAGAGCCCTTTTCCTCTGTCGCGCCGACCCCCGGCGGGTGGAGCATGGGCGCACCGGCCGGGCCGGAGCCCGACGGACCA
CCGAGACGGGAGACGGACAG

Downstream 100 bases:

>100_bases
GCGCCGCGTTACCTGCGTGGGTCCGGCGGCTCAGACGACCTGGGGCGGCCGGCCGGTGTCGCTCACCATCGGGCGCCCGG
CCGCCTCCCAGTCGAGGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTRALILRRGAVAVGLALMASLSACGGDDGGGSGAKAPDDASTDDFCATFNSLFEKVLSQATSGDSAAVISALKDWAADI
EDVGTPSAMPDDARHGFELFVDQAKKLDENASLEDLQNLGDDLSADDQADGEAFTTWTEENCPLDIPGLDGSDLPSIDPS
DLPSIDPSDLASMDPEELESMMSELASNMSELTESP

Sequences:

>Translated_196_residues
MTRALILRRGAVAVGLALMASLSACGGDDGGGSGAKAPDDASTDDFCATFNSLFEKVLSQATSGDSAAVISALKDWAADI
EDVGTPSAMPDDARHGFELFVDQAKKLDENASLEDLQNLGDDLSADDQADGEAFTTWTEENCPLDIPGLDGSDLPSIDPS
DLPSIDPSDLASMDPEELESMMSELASNMSELTESP
>Mature_195_residues
TRALILRRGAVAVGLALMASLSACGGDDGGGSGAKAPDDASTDDFCATFNSLFEKVLSQATSGDSAAVISALKDWAADIE
DVGTPSAMPDDARHGFELFVDQAKKLDENASLEDLQNLGDDLSADDQADGEAFTTWTEENCPLDIPGLDGSDLPSIDPSD
LPSIDPSDLASMDPEELESMMSELASNMSELTESP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20394; Mature: 20263

Theoretical pI: Translated: 3.49; Mature: 3.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRALILRRGAVAVGLALMASLSACGGDDGGGSGAKAPDDASTDDFCATFNSLFEKVLSQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ATSGDSAAVISALKDWAADIEDVGTPSAMPDDARHGFELFVDQAKKLDENASLEDLQNLG
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
DDLSADDQADGEAFTTWTEENCPLDIPGLDGSDLPSIDPSDLPSIDPSDLASMDPEELES
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHH
MMSELASNMSELTESP
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TRALILRRGAVAVGLALMASLSACGGDDGGGSGAKAPDDASTDDFCATFNSLFEKVLSQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ATSGDSAAVISALKDWAADIEDVGTPSAMPDDARHGFELFVDQAKKLDENASLEDLQNLG
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
DDLSADDQADGEAFTTWTEENCPLDIPGLDGSDLPSIDPSDLPSIDPSDLASMDPEELES
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHH
MMSELASNMSELTESP
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA