| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714419
Identifier: 119714419
GI number: 119714419
Start: 168571
End: 169785
Strand: Direct
Name: 119714419
Synonym: Noca_0152
Alternate gene names: NA
Gene position: 168571-169785 (Clockwise)
Preceding gene: 119714418
Following gene: 119714421
Centisome position: 3.38
GC content: 74.24
Gene sequence:
>1215_bases GTGAGCACGCGGGTCCTGTTGCACGTCGGTACGCCGAAGACCGGCACGTCGTACCTGCAAGACGTGCTGTACCGCAACCG ACGCACCCTGGCGGCGGCCGACATCCTCTATCCCGCCGACCGCTTCGACGCCCACTTCCTCGCGGCGCTCGACCTGATGC GGCTGCCCTGGGGCGGCCTCGAGGCCGAGGCGGTCGGCGCCTGGGACCGGCTCGCCGCCCGGGTCCGCGGCCACCACGGC ACCGCGATCATCAGCCACGAGATCCTCGCCACCGCGTCCCGCTCCCAGGCCGGCCGTGCGCTGGAGTCGCTGGGCCACCG CGCCGGCACCGAGGTGCACCTGGTGCTCTCGGTGCGCGACCTGGTCCGGCAGATCCCCGCGGAGTGGCAGGAGAACGTCA AGCACCGGCAGGCGCTGACCTACGGCGCCTTCCTCGACCAGGTGCAGGACCCGCAGCGGGAGAGCCGGATCGCCACCTGG TTCTGGGGGGTCCAGGAGATCCCCGACATCCTCAACCGGTGGGGCCACGACCTGCCGCCCGAGCGCGTCCACGTGGTCAC GGTGCCACCGGCCGGTGGCCCGCACCAGCTGCTCTGGAAGCGGTTCAGCCTGGTCCTCGGCCTCGACGGGCTCGACCTGG ACCTGGAGGCCGAGCGGGCCAACCCCTCGCTCGGCGCCCCGGAGACCGCACTGCTGCGGCGGGTCAACCGGGCCGCGAAC CGGGAGCTCAACCCGGGTGACTACCGGCCGCTGGTGCGCGAGCTGCTCGCCCACCAGACGCTCTCCAAGCGGACCCGGTC GCCGCGGCTGGCCCTGCCGCCCGACGTGCACCCGTGGACCCAGGAGGTCACCCGCTCGTGGATCGCCGAGATCGAGGAGC GCGGCTACGACGTGGTGGGCGACCTGCACGACCTGGTCGGCGCGCCCCCGGTGACGCAGTACGCCGATCCCGACCACCCG GCCGAGAAGCAGGTCGCCGCGGCGGCCGTCGACGCGATCAAGGCGCTGCTGCTCGAGGGCGCCCGGCTGCGCCAGTCCGA GGAACGCCTGCGCCAGGAGCTGCGGGACACCCAGGTCGCGCTCGAGCGGTCCTACCTGCGCCCGACGTACCGCTGGCGCG AGAAGGTGGTCCGCCGGCTCCAGGGGGGAGCGGTCGGCCGGCAGCTGCTGGCGGGCTACCGGCGGGTGCGCGGGCGCAGC TCGCGGTCGGCGTAG
Upstream 100 bases:
>100_bases GCGACCCGGACAGCCTGCTGTCCGTCGATCGCAGCGGCGTCCCGGAGCCCTCCGACGCCGGAGTCCTGGCGCTGGGGATG CGCCTCCTACTGGAGAACAC
Downstream 100 bases:
>100_bases CGCCCGATCCGCCAGGTCGCGAACCCGTCGGCGCCCATGCCGAACGCGCCGCCCACCACCGGGGTGCGCCGGGCGACGGT GATCGCCAGCCGCTTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSTRVLLHVGTPKTGTSYLQDVLYRNRRTLAAADILYPADRFDAHFLAALDLMRLPWGGLEAEAVGAWDRLAARVRGHHG TAIISHEILATASRSQAGRALESLGHRAGTEVHLVLSVRDLVRQIPAEWQENVKHRQALTYGAFLDQVQDPQRESRIATW FWGVQEIPDILNRWGHDLPPERVHVVTVPPAGGPHQLLWKRFSLVLGLDGLDLDLEAERANPSLGAPETALLRRVNRAAN RELNPGDYRPLVRELLAHQTLSKRTRSPRLALPPDVHPWTQEVTRSWIAEIEERGYDVVGDLHDLVGAPPVTQYADPDHP AEKQVAAAAVDAIKALLLEGARLRQSEERLRQELRDTQVALERSYLRPTYRWREKVVRRLQGGAVGRQLLAGYRRVRGRS SRSA
Sequences:
>Translated_404_residues MSTRVLLHVGTPKTGTSYLQDVLYRNRRTLAAADILYPADRFDAHFLAALDLMRLPWGGLEAEAVGAWDRLAARVRGHHG TAIISHEILATASRSQAGRALESLGHRAGTEVHLVLSVRDLVRQIPAEWQENVKHRQALTYGAFLDQVQDPQRESRIATW FWGVQEIPDILNRWGHDLPPERVHVVTVPPAGGPHQLLWKRFSLVLGLDGLDLDLEAERANPSLGAPETALLRRVNRAAN RELNPGDYRPLVRELLAHQTLSKRTRSPRLALPPDVHPWTQEVTRSWIAEIEERGYDVVGDLHDLVGAPPVTQYADPDHP AEKQVAAAAVDAIKALLLEGARLRQSEERLRQELRDTQVALERSYLRPTYRWREKVVRRLQGGAVGRQLLAGYRRVRGRS SRSA >Mature_403_residues STRVLLHVGTPKTGTSYLQDVLYRNRRTLAAADILYPADRFDAHFLAALDLMRLPWGGLEAEAVGAWDRLAARVRGHHGT AIISHEILATASRSQAGRALESLGHRAGTEVHLVLSVRDLVRQIPAEWQENVKHRQALTYGAFLDQVQDPQRESRIATWF WGVQEIPDILNRWGHDLPPERVHVVTVPPAGGPHQLLWKRFSLVLGLDGLDLDLEAERANPSLGAPETALLRRVNRAANR ELNPGDYRPLVRELLAHQTLSKRTRSPRLALPPDVHPWTQEVTRSWIAEIEERGYDVVGDLHDLVGAPPVTQYADPDHPA EKQVAAAAVDAIKALLLEGARLRQSEERLRQELRDTQVALERSYLRPTYRWREKVVRRLQGGAVGRQLLAGYRRVRGRSS RSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45456; Mature: 45325
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: PS01095 CHITINASE_18
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRVLLHVGTPKTGTSYLQDVLYRNRRTLAAADILYPADRFDAHFLAALDLMRLPWGGL CCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC EAEAVGAWDRLAARVRGHHGTAIISHEILATASRSQAGRALESLGHRAGTEVHLVLSVRD CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH LVRQIPAEWQENVKHRQALTYGAFLDQVQDPQRESRIATWFWGVQEIPDILNRWGHDLPP HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCC ERVHVVTVPPAGGPHQLLWKRFSLVLGLDGLDLDLEAERANPSLGAPETALLRRVNRAAN CCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC RELNPGDYRPLVRELLAHQTLSKRTRSPRLALPPDVHPWTQEVTRSWIAEIEERGYDVVG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH DLHDLVGAPPVTQYADPDHPAEKQVAAAAVDAIKALLLEGARLRQSEERLRQELRDTQVA HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LERSYLRPTYRWREKVVRRLQGGAVGRQLLAGYRRVRGRSSRSA HHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure STRVLLHVGTPKTGTSYLQDVLYRNRRTLAAADILYPADRFDAHFLAALDLMRLPWGGL CCEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC EAEAVGAWDRLAARVRGHHGTAIISHEILATASRSQAGRALESLGHRAGTEVHLVLSVRD CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHH LVRQIPAEWQENVKHRQALTYGAFLDQVQDPQRESRIATWFWGVQEIPDILNRWGHDLPP HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCC ERVHVVTVPPAGGPHQLLWKRFSLVLGLDGLDLDLEAERANPSLGAPETALLRRVNRAAN CCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC RELNPGDYRPLVRELLAHQTLSKRTRSPRLALPPDVHPWTQEVTRSWIAEIEERGYDVVG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH DLHDLVGAPPVTQYADPDHPAEKQVAAAAVDAIKALLLEGARLRQSEERLRQELRDTQVA HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LERSYLRPTYRWREKVVRRLQGGAVGRQLLAGYRRVRGRSSRSA HHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA