| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714413
Identifier: 119714413
GI number: 119714413
Start: 160034
End: 161599
Strand: Direct
Name: 119714413
Synonym: Noca_0146
Alternate gene names: NA
Gene position: 160034-161599 (Clockwise)
Preceding gene: 119714412
Following gene: 119714414
Centisome position: 3.21
GC content: 72.54
Gene sequence:
>1566_bases ATGCAGTTCACCACCTCTCGGGCGATCGTGCGTCGCCTCGTCCCGGCGGCCGCCGGTGCCGCCGTCCTCGCCACCGTGGC CTCGTCCGCGGCCCTCGCCGCTCCGGGGGTGACCCCGGCGCACTACACCGACGCCCTGGACCCGGGCAGCACGGTGACGA TCACCAAGACCGTCGAGACCCCACCGATCCCGCCGCGTCCCGACATCGTGTTCCTGGCCGACACGACCGGCAGCATGGGC GGCAGCATCGCCAACGTCCGCAGCAACGCGAACGCGATCCTGGCCCAGATCCAGGCCGCACAGCCCACGGCCCGGTTCGC GGTCGCGGAGTACAAGGACGAGTCCGACGGGCCCGCCGCGGTCTTCCACGTCGACCAGCAGCTCACCGACAGCACCGCGG ACGTGGTCGCCGGTATCAACGCCTGGTCCGCCTCCGGCGGCGGCGACGCCCCCGAGGCGTGGATCGGCGCGCTCGGCCGG ATCCCGTCGAGCATCGACTTCCGTCCCGACGGCACCCGGGTGCTGGTGATGTTCGGCGACGCGCCCAGCCACGACCCGTC ACTGGGCTTCACCCTCGGGTCCGCGACCAGCGGCCTGCAGGCCAGCGGTGTCCGGGTGATCGCCATCGACGTGCCCGGCA CCGCCGGCGGCCTCGATGCGCTCGGCCAGGCCACCCACGTGACCTCGCAGACCGGCGGCTCGCTCGCCGCGGCCGACCCC GACCAGGTCGCGAGCACGATCCTCAGCGAGCTGCAGAACCTGCCCGCCGTGGTCACCCACGACACCACCTGTGACCCCGG GGCGTCGCTGTCCTTCGACCAGGCCAGCCGCACGGTGACCTCCGGTGACAGCACGACGTTCGACGAGACCATCACCGTCG CCGGTGACGCCGTGCAGGGCAGCGTGCTCACCTGCACCACGCGGTTCCTCGTCAACGGCGAGCTCCCGGGACCCGAGTTC GTCCAGACCGTGGAGATCGCGGTCAACGACGTCACCCCGCCGGTCGTGACCGTCGAGAGCAAGACCGTCGAGGCCACCGG GCCCGACGGTGCGACGGTCGGCTACACGTCCTCGGCGACCGACAACGTCGACGGGCCGCTCACCCCGACCTGCACGCCGG CCTCGGGCAGCCTGTTCGGGCTCGGCGCGACGACCGTGACCTGCGCGGCCACGGACGCGGCCGGCAACACCGGCACCGGC ACCGGCACGATCACCGTCGTCGACACCACGCCCCCGTCGGTCGGGTGCCCGGAGGCGGAGAACCCGGGCGGTCAGGTTCC GGGCGCGCACAACGAGGACGGCTTCTTCCGGCTCGAGGCGAGCGACATCGTCGACGGCGACGTGGACGTCTACCTGCGCG ACACCGGCAGCGGGACCGTCTTCGGGCCGTACGCGTCGGGCCAGCGGGTCAAGTACACCGAGAACGGCGCCAAGCCCTCG GTGAAGACGATGCCGAGCGGCATCCTGCACATCACCGGCACCGGTGACGCCGAGGTGTACGCCGTCGACTTCAGCGGCAA CACGTCCGCACCGGCGGCCTGCCTCGTCCCGCAGCCGCCCAAGTAG
Upstream 100 bases:
>100_bases GTGGTGCGGGGTGGCCCGCTCGGGTCATGCCGCCCGGACGGCGAGCGTCCCTAGCGTCGAGAACCGCGGCACAAGCCGCC TTCTCGGAGGGACATCCATC
Downstream 100 bases:
>100_bases TCCGGACGGGCGACCGGAGCAGCTGCCGGAGTCTCGGGGGCGTCCGCCCCGGGGGTGATCCCCCGGGGCGGACGCCGATG CCCGGCGCCGATCGCTCCCG
Product: hyalin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVETPPIPPRPDIVFLADTTGSMG GSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAAVFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGR IPSSIDFRPDGTRVLVMFGDAPSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQGSVLTCTTRFLVNGELPGPEF VQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSATDNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTG TGTITVVDTTPPSVGCPEAENPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK
Sequences:
>Translated_521_residues MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVETPPIPPRPDIVFLADTTGSMG GSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAAVFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGR IPSSIDFRPDGTRVLVMFGDAPSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQGSVLTCTTRFLVNGELPGPEF VQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSATDNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTG TGTITVVDTTPPSVGCPEAENPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK >Mature_521_residues MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVETPPIPPRPDIVFLADTTGSMG GSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAAVFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGR IPSSIDFRPDGTRVLVMFGDAPSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQGSVLTCTTRFLVNGELPGPEF VQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSATDNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTG TGTITVVDTTPPSVGCPEAENPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52243; Mature: 52243
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVET CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC PPIPPRPDIVFLADTTGSMGGSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAA CCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEE VFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGRIPSSIDFRPDGTRVLVMFGD EEEECHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECC APSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP CCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEEECCCCCCEECCCH DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQG HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCEEECCCCCCCCCEEEEECCCCCC SVLTCTTRFLVNGELPGPEFVQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSAT CEEEEEEEEEEECCCCCHHHEEEEEEEEECCCCCEEEEECCEEEECCCCCCEEEECCCCC DNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTGTGTITVVDTTPPSVGCPEAE CCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC NPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS CCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEEECCCCCEEECCCCCCEEEEECCCCCCC VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK CCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCC >Mature Secondary Structure MQFTTSRAIVRRLVPAAAGAAVLATVASSAALAAPGVTPAHYTDALDPGSTVTITKTVET CCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC PPIPPRPDIVFLADTTGSMGGSIANVRSNANAILAQIQAAQPTARFAVAEYKDESDGPAA CCCCCCCCEEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEE VFHVDQQLTDSTADVVAGINAWSASGGGDAPEAWIGALGRIPSSIDFRPDGTRVLVMFGD EEEECHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECC APSHDPSLGFTLGSATSGLQASGVRVIAIDVPGTAGGLDALGQATHVTSQTGGSLAAADP CCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCEEEECCCCCCEECCCH DQVASTILSELQNLPAVVTHDTTCDPGASLSFDQASRTVTSGDSTTFDETITVAGDAVQG HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCEEECCCCCCCCCEEEEECCCCCC SVLTCTTRFLVNGELPGPEFVQTVEIAVNDVTPPVVTVESKTVEATGPDGATVGYTSSAT CEEEEEEEEEEECCCCCHHHEEEEEEEEECCCCCEEEEECCEEEECCCCCCEEEECCCCC DNVDGPLTPTCTPASGSLFGLGATTVTCAATDAAGNTGTGTGTITVVDTTPPSVGCPEAE CCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC NPGGQVPGAHNEDGFFRLEASDIVDGDVDVYLRDTGSGTVFGPYASGQRVKYTENGAKPS CCCCCCCCCCCCCCEEEEEHHHCCCCCEEEEEEECCCCCEEECCCCCCEEEEECCCCCCC VKTMPSGILHITGTGDAEVYAVDFSGNTSAPAACLVPQPPK CCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA