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The map label for this gene is 119714406

Identifier: 119714406

GI number: 119714406

Start: 154925

End: 155605

Strand: Direct

Name: 119714406

Synonym: Noca_0139

Alternate gene names: NA

Gene position: 154925-155605 (Clockwise)

Preceding gene: 119714405

Following gene: 119714411

Centisome position: 3.11

GC content: 76.8

Gene sequence:

>681_bases
ATGACCGGGACCGTGCTGCACCCCCGGGTCGCGCCGCGGCGGGCGACGGCGCGCGCGACGACCTGGTGGGGCAAGGCGTG
GGTGCGGGCCGTCGACGAGGCGGCGTACGCCGAGGCCGACCTGGTGGCGAGCCGGGCGCTCGCCCGCGCCGGCCGGGTGG
GTCAGATCGCCACCGAGCCCGGCCGGTTCGTGGCCGCGGTCGAGGACCGGCGCGGGCTGTGGACGGTCGAGGGCACGGTG
CCGGTGCTCGGTGCCGCCGACGTCGCCGCGCTCGTGGAGACCGTGGCCGCGGAGTCCGGCCGGATCGCGGCCCTGCTGGC
CGGCGAGCTCCCGCACCGGCTGGTCGAGCACGCCGAGGAGGCGGGCGTCGAGCTGCTGCCGTACGGCGGTGAGCTCGGTG
CGTCGTGCACCTGCGAGCACTGGGTGGATCCGTGCGTGCACGCTCTGGCCGTGCTCCACCAGCTCGCGTGGCTGGTCGAC
GCCGACCCGTTCGTCCTGCTCCAGCTGCGCGGCCTGGCGCGCGACGAGCTGCTGGGACGATTGCACGAGCGCTCCGCCGC
TCCCCTGGTCGAGCCCCGAGACTCGGCCGACGGCACCGTGGACGAGGACGAACCGGACCTCCAGGCCGCCCTCGAGGCGG
CGCTGTACGCCGCCCGGCTGCTGGTCGACCCGCTCAGCTGA

Upstream 100 bases:

>100_bases
GTGCCCTCGCCGACGCGGTGCTCTCCCGGGGCGAGGCGGCGTTGACCGAGCTCAGCGACGACGAGCTGCGCGACTTCGTC
GCGCTGCGCCGGGACCCCTG

Downstream 100 bases:

>100_bases
CGCTCAACCGTCGCTCATCCGGCACCGAGCGCGCCCAGGGCCATCCGGCTGAGCAGGCCGCGCATGTCGGTGTCGGGGAG
CAGGCCGCTGTGGGGGGTGG

Product: zinc finger SWIM domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTGTVLHPRVAPRRATARATTWWGKAWVRAVDEAAYAEADLVASRALARAGRVGQIATEPGRFVAAVEDRRGLWTVEGTV
PVLGAADVAALVETVAAESGRIAALLAGELPHRLVEHAEEAGVELLPYGGELGASCTCEHWVDPCVHALAVLHQLAWLVD
ADPFVLLQLRGLARDELLGRLHERSAAPLVEPRDSADGTVDEDEPDLQAALEAALYAARLLVDPLS

Sequences:

>Translated_226_residues
MTGTVLHPRVAPRRATARATTWWGKAWVRAVDEAAYAEADLVASRALARAGRVGQIATEPGRFVAAVEDRRGLWTVEGTV
PVLGAADVAALVETVAAESGRIAALLAGELPHRLVEHAEEAGVELLPYGGELGASCTCEHWVDPCVHALAVLHQLAWLVD
ADPFVLLQLRGLARDELLGRLHERSAAPLVEPRDSADGTVDEDEPDLQAALEAALYAARLLVDPLS
>Mature_225_residues
TGTVLHPRVAPRRATARATTWWGKAWVRAVDEAAYAEADLVASRALARAGRVGQIATEPGRFVAAVEDRRGLWTVEGTVP
VLGAADVAALVETVAAESGRIAALLAGELPHRLVEHAEEAGVELLPYGGELGASCTCEHWVDPCVHALAVLHQLAWLVDA
DPFVLLQLRGLARDELLGRLHERSAAPLVEPRDSADGTVDEDEPDLQAALEAALYAARLLVDPLS

Specific function: Unknown

COG id: COG4279

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24061; Mature: 23930

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTVLHPRVAPRRATARATTWWGKAWVRAVDEAAYAEADLVASRALARAGRVGQIATEP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GRFVAAVEDRRGLWTVEGTVPVLGAADVAALVETVAAESGRIAALLAGELPHRLVEHAEE
CCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
AGVELLPYGGELGASCTCEHWVDPCVHALAVLHQLAWLVDADPFVLLQLRGLARDELLGR
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCHHHHHHHH
LHERSAAPLVEPRDSADGTVDEDEPDLQAALEAALYAARLLVDPLS
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGTVLHPRVAPRRATARATTWWGKAWVRAVDEAAYAEADLVASRALARAGRVGQIATEP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
GRFVAAVEDRRGLWTVEGTVPVLGAADVAALVETVAAESGRIAALLAGELPHRLVEHAEE
CCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
AGVELLPYGGELGASCTCEHWVDPCVHALAVLHQLAWLVDADPFVLLQLRGLARDELLGR
CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCHHHHHHHH
LHERSAAPLVEPRDSADGTVDEDEPDLQAALEAALYAARLLVDPLS
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA