| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is ywqA [H]
Identifier: 119714405
GI number: 119714405
Start: 152214
End: 154925
Strand: Direct
Name: ywqA [H]
Synonym: Noca_0138
Alternate gene names: 119714405
Gene position: 152214-154925 (Clockwise)
Preceding gene: 119714402
Following gene: 119714406
Centisome position: 3.05
GC content: 74.41
Gene sequence:
>2712_bases GTGAGCTTCGTCCCGGTCACCGGCCCGGCGACGTTCCGTGCCGCCGACCCGCCGCGCGAGGGCGTCGTCGAGTTCACCGA CGACCGGCGCACCGTGAGCCTGCCGATCCGGGCGGCCCTGCCGGTGCTGACCAAGGCCCGCTCGCGCGACGACCTGCACC CGAGCGTCGGGGTGCTGTCCGGGGCCGCGCTGCTCGCCCTGCGGCTGGTCGCCGCGGGCAAGTTCGCTCCGGCGGGGAGC AGCCCGCCCGCCTGGCGGGTGGCGGGCCTGGACGCCGACGACGAGCAGCGGATCGTGTTGCTGGCGCGCAACGGACCGGA CGACGAGCAGCTGGTGCGCGACCTGCTCGACGCCGTGGCCGACGCCATGCCCAGGACCCAGCCCAGGACCCAGCCCAGGA GCCGGCCCAGCGCCGAGCCGAGCGGGACGACGGTCTCCCGGGAGCGCCGACCGACGTTCGAGGAGCGCCTCCAGGCACGG CTGGCGCGGCACCAGCGCGTCGACGCGCGCGCCCTGCCGCAGCTGGTCACCATCTCGCTGCGGGTCGAGGCGGACGAGGA GGAGCTGGTCGCGGGCGCCGTACGCCTGGTGGCGCAGGCGCACGACGAGCAGAACCCGCTGCACCTGTGCGACCTCGCGC TGCTGTGGACCGGGACACCGCAGGAGCACGGCTTCGGCGAGCGGGCCCGCACGCACGCGACGATCGCGCTCCGCGCGGCT GCGGACGCGTGGCCGGTGCTCGACCGGCTGTTGGAGCTGCGGGTGCCCGACCAGCTCACCCTGGACAGCGACGAGCTGGT CAGCCTGCTCGACGAGGGCGTCGGTGCGCTGCGTGCGGCGGGCGTCGACGTGCTGTGGCCCAAGGCGCTCGGCCGCGACC TCACCGCGACCACGGTCCTCGACCGGGCCGCCCCGATGACCCGGGAGGAGCCGCTCAACGAGCCGGTGCTCGGCGCCGAG GCGCTGTTCGCGTTCAACTGGCAGATCGCGCTGCACGGCGACCCGCTCACCGCGGAGGAGATGGACCGGCTCGCGACGTC CGCCTCGCCGCTGCTGCGGCTGCGGGGCAGTTGGACGGTCGTCGATCCCTCGATCGCGCGGAAGGCGAAGAAGCGGCTGG TCCGCACCGTCAAGCCCGCCGAGGCCGTCGCCGCCGCGCTCACCGGGACCGCGCAGATCGCCGCCCCGGGTGGTGAGCAG AGCGAGCAGGACGTCGTCGTCGGCGCCTCGCTCCTCAAGGTCCGGGACCGGCTCCTGGGCGCCGCCACCAGGGAGCCGGT CGAGCCTCCGGCCGCGCTGCGGGCCACGCTGCGCGACTACCAGCGGCACGGACTCACCTGGCTGGCGGAGATGACCTCGC TGGGGCTCGGCGCCTGCCTGGCCGATGACATGGGGCTGGGCAAGACCGTCACGCTGATCGCGCTGCACCTGCACCGGGCC GAGCGCGGCCACCGAGGCCCGACGCTGGTGGTCTGCCCGGCGAGCCTGCTCGGCAACTGGGAGGCGGAGGTCCGCCGGTT CGCCCCGGGTGTGCCGGTGGTGCGCTTCCACGGCACGTCCCGTGACGTCGAGGCGGCCGGCGACGGGTTCGTGCTGACGA CGTACGGGACGATGCGGCGCGACGCCGAGGCGCTCGGCTCGGTGCGGTGGGACCTCGTGGTCGCCGACGAGGCCCAGCAC GTGAAGAACCCGCGTACGGCGACGGCTCGGGCGCTCCGGTCGATCACGAGCGCGGCGCGCGTCGCCCTCACCGGCACCCC GGTCGAGAACGACCTCACCGAGCTGTGGGCGATCCTCGACTGGACCACGCCCGGTCTGCTCGGCAGTCGCAACGCCTTCC GCAAGGCGTGGGCGGCGCCGATCGAGTCCGGCCGCGAGCCCGCGAAGGCCCGGCAGTTCGCGGACCTGATCGGGCCATTC CTGCTCCGCCGTCGCAAGTCCGACCCCGGCATCGCCCCCGAGCTCCCGGCGAAGACCGAGACCGACCACCCGCTGCGGCT GACCCGGGAGCAGGTGGTGCTCTACGAGTCGTTCGTGCGCGACACGATGGCGCGCATCGAGCGCGCCGACCCCTCGGACC CGGTCGCGCGGCGCGGGCTGGTGCTGACCCTGCTCACCGGCCTCAAGCAGATCTGCAACCACCCCGACCACTTCTTGAAG CGCTCCGGCGCCCGGCTGTCCGGCCGGTCGGAGAAGGTCGACCTGCTCGACGAGCTGGTCGGCACCGTGCTCGCCGAGGA CGGGGCGGTGCTGGTGTTCACCCAGTACGTCGCGATGGCGCGACTGCTGGAGGGCCATCTCGCCCGCGCCGGCGTACCCC ACCAGCTGCTGCACGGCGGCACTCCGGTCCGGGAGCGGGAGGCGATGGTGGCGCGGTTCCAGGCGGGTGAGACGCCGGTG TTCCTGCTCTCGCTCAAGGCCGGTGGCACCGGGCTCAACCTGACCCGCGCCGACCACGTCGTGCACGTCGACCGGTGGTG GAACCCGGCCGTGGAGGAGCAGGCGACCGATCGCGCCTACCGGATCGGGCAGACCAAGCCGGTGCAGGTGCACCGGATGA TCACCCGCGGCACCGTCGAGGAGAAGGTCGCCGAGCTGCTGACCCGCAAGCGTGCCCTCGCCGACGCGGTGCTCTCCCGG GGCGAGGCGGCGTTGACCGAGCTCAGCGACGACGAGCTGCGCGACTTCGTCGCGCTGCGCCGGGACCCCTGA
Upstream 100 bases:
>100_bases TCCCGTCCAGGCGGGCGATCTTGGCGTCGAGGATGCTCATGCGGCCAGGCTACGTCGCGGCCGGGAGGGAACCGTCGGAC CGTCCGGCTAGCGTCGGGGC
Downstream 100 bases:
>100_bases TGACCGGGACCGTGCTGCACCCCCGGGTCGCGCCGCGGCGGGCGACGGCGCGCGCGACGACCTGGTGGGGCAAGGCGTGG GTGCGGGCCGTCGACGAGGC
Product: SNF2-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 903; Mature: 902
Protein sequence:
>903_residues MSFVPVTGPATFRAADPPREGVVEFTDDRRTVSLPIRAALPVLTKARSRDDLHPSVGVLSGAALLALRLVAAGKFAPAGS SPPAWRVAGLDADDEQRIVLLARNGPDDEQLVRDLLDAVADAMPRTQPRTQPRSRPSAEPSGTTVSRERRPTFEERLQAR LARHQRVDARALPQLVTISLRVEADEEELVAGAVRLVAQAHDEQNPLHLCDLALLWTGTPQEHGFGERARTHATIALRAA ADAWPVLDRLLELRVPDQLTLDSDELVSLLDEGVGALRAAGVDVLWPKALGRDLTATTVLDRAAPMTREEPLNEPVLGAE ALFAFNWQIALHGDPLTAEEMDRLATSASPLLRLRGSWTVVDPSIARKAKKRLVRTVKPAEAVAAALTGTAQIAAPGGEQ SEQDVVVGASLLKVRDRLLGAATREPVEPPAALRATLRDYQRHGLTWLAEMTSLGLGACLADDMGLGKTVTLIALHLHRA ERGHRGPTLVVCPASLLGNWEAEVRRFAPGVPVVRFHGTSRDVEAAGDGFVLTTYGTMRRDAEALGSVRWDLVVADEAQH VKNPRTATARALRSITSAARVALTGTPVENDLTELWAILDWTTPGLLGSRNAFRKAWAAPIESGREPAKARQFADLIGPF LLRRRKSDPGIAPELPAKTETDHPLRLTREQVVLYESFVRDTMARIERADPSDPVARRGLVLTLLTGLKQICNHPDHFLK RSGARLSGRSEKVDLLDELVGTVLAEDGAVLVFTQYVAMARLLEGHLARAGVPHQLLHGGTPVREREAMVARFQAGETPV FLLSLKAGGTGLNLTRADHVVHVDRWWNPAVEEQATDRAYRIGQTKPVQVHRMITRGTVEEKVAELLTRKRALADAVLSR GEAALTELSDDELRDFVALRRDP
Sequences:
>Translated_903_residues MSFVPVTGPATFRAADPPREGVVEFTDDRRTVSLPIRAALPVLTKARSRDDLHPSVGVLSGAALLALRLVAAGKFAPAGS SPPAWRVAGLDADDEQRIVLLARNGPDDEQLVRDLLDAVADAMPRTQPRTQPRSRPSAEPSGTTVSRERRPTFEERLQAR LARHQRVDARALPQLVTISLRVEADEEELVAGAVRLVAQAHDEQNPLHLCDLALLWTGTPQEHGFGERARTHATIALRAA ADAWPVLDRLLELRVPDQLTLDSDELVSLLDEGVGALRAAGVDVLWPKALGRDLTATTVLDRAAPMTREEPLNEPVLGAE ALFAFNWQIALHGDPLTAEEMDRLATSASPLLRLRGSWTVVDPSIARKAKKRLVRTVKPAEAVAAALTGTAQIAAPGGEQ SEQDVVVGASLLKVRDRLLGAATREPVEPPAALRATLRDYQRHGLTWLAEMTSLGLGACLADDMGLGKTVTLIALHLHRA ERGHRGPTLVVCPASLLGNWEAEVRRFAPGVPVVRFHGTSRDVEAAGDGFVLTTYGTMRRDAEALGSVRWDLVVADEAQH VKNPRTATARALRSITSAARVALTGTPVENDLTELWAILDWTTPGLLGSRNAFRKAWAAPIESGREPAKARQFADLIGPF LLRRRKSDPGIAPELPAKTETDHPLRLTREQVVLYESFVRDTMARIERADPSDPVARRGLVLTLLTGLKQICNHPDHFLK RSGARLSGRSEKVDLLDELVGTVLAEDGAVLVFTQYVAMARLLEGHLARAGVPHQLLHGGTPVREREAMVARFQAGETPV FLLSLKAGGTGLNLTRADHVVHVDRWWNPAVEEQATDRAYRIGQTKPVQVHRMITRGTVEEKVAELLTRKRALADAVLSR GEAALTELSDDELRDFVALRRDP >Mature_902_residues SFVPVTGPATFRAADPPREGVVEFTDDRRTVSLPIRAALPVLTKARSRDDLHPSVGVLSGAALLALRLVAAGKFAPAGSS PPAWRVAGLDADDEQRIVLLARNGPDDEQLVRDLLDAVADAMPRTQPRTQPRSRPSAEPSGTTVSRERRPTFEERLQARL ARHQRVDARALPQLVTISLRVEADEEELVAGAVRLVAQAHDEQNPLHLCDLALLWTGTPQEHGFGERARTHATIALRAAA DAWPVLDRLLELRVPDQLTLDSDELVSLLDEGVGALRAAGVDVLWPKALGRDLTATTVLDRAAPMTREEPLNEPVLGAEA LFAFNWQIALHGDPLTAEEMDRLATSASPLLRLRGSWTVVDPSIARKAKKRLVRTVKPAEAVAAALTGTAQIAAPGGEQS EQDVVVGASLLKVRDRLLGAATREPVEPPAALRATLRDYQRHGLTWLAEMTSLGLGACLADDMGLGKTVTLIALHLHRAE RGHRGPTLVVCPASLLGNWEAEVRRFAPGVPVVRFHGTSRDVEAAGDGFVLTTYGTMRRDAEALGSVRWDLVVADEAQHV KNPRTATARALRSITSAARVALTGTPVENDLTELWAILDWTTPGLLGSRNAFRKAWAAPIESGREPAKARQFADLIGPFL LRRRKSDPGIAPELPAKTETDHPLRLTREQVVLYESFVRDTMARIERADPSDPVARRGLVLTLLTGLKQICNHPDHFLKR SGARLSGRSEKVDLLDELVGTVLAEDGAVLVFTQYVAMARLLEGHLARAGVPHQLLHGGTPVREREAMVARFQAGETPVF LLSLKAGGTGLNLTRADHVVHVDRWWNPAVEEQATDRAYRIGQTKPVQVHRMITRGTVEEKVAELLTRKRALADAVLSRG EAALTELSDDELRDFVALRRDP
Specific function: Transcription Regulator That Activates Transcription By Stimulating RNA Polymerase (Rnap) Recycling In Case Of Stress Conditions Such As Supercoiled DNA Or High Salt Concentrations. Probably Acts By Releasing The Rnap, When It Is Trapped Or Immobilized On
COG id: COG0553
COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI27477070, Length=561, Percent_Identity=31.3725490196078, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI164419749, Length=483, Percent_Identity=33.9544513457557, Blast_Score=253, Evalue=5e-67, Organism=Homo sapiens, GI21071044, Length=495, Percent_Identity=33.1313131313131, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI148612870, Length=466, Percent_Identity=34.1201716738197, Blast_Score=242, Evalue=1e-63, Organism=Homo sapiens, GI4557565, Length=502, Percent_Identity=31.6733067729084, Blast_Score=240, Evalue=4e-63, Organism=Homo sapiens, GI21071058, Length=507, Percent_Identity=31.7554240631164, Blast_Score=237, Evalue=3e-62, Organism=Homo sapiens, GI24308089, Length=508, Percent_Identity=32.2834645669291, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI48255900, Length=502, Percent_Identity=32.0717131474104, Blast_Score=231, Evalue=2e-60, Organism=Homo sapiens, GI48255898, Length=502, Percent_Identity=32.0717131474104, Blast_Score=231, Evalue=3e-60, Organism=Homo sapiens, GI6912622, Length=534, Percent_Identity=29.0262172284644, Blast_Score=228, Evalue=2e-59, Organism=Homo sapiens, GI52630322, Length=508, Percent_Identity=31.2992125984252, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI52630326, Length=508, Percent_Identity=31.2992125984252, Blast_Score=227, Evalue=4e-59, Organism=Homo sapiens, GI158420731, Length=511, Percent_Identity=31.3111545988258, Blast_Score=227, Evalue=4e-59, Organism=Homo sapiens, GI192807316, Length=502, Percent_Identity=31.6733067729084, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI192807314, Length=502, Percent_Identity=31.6733067729084, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI192807318, Length=502, Percent_Identity=31.6733067729084, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI192807320, Length=502, Percent_Identity=31.6733067729084, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI192807323, Length=502, Percent_Identity=31.6733067729084, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI192807312, Length=502, Percent_Identity=31.6733067729084, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI21071056, Length=502, Percent_Identity=31.6733067729084, Blast_Score=224, Evalue=3e-58, Organism=Homo sapiens, GI118421089, Length=474, Percent_Identity=33.5443037974684, Blast_Score=221, Evalue=3e-57, Organism=Homo sapiens, GI21914927, Length=543, Percent_Identity=28.9134438305709, Blast_Score=217, Evalue=4e-56, Organism=Homo sapiens, GI68299795, Length=507, Percent_Identity=33.1360946745562, Blast_Score=216, Evalue=9e-56, Organism=Homo sapiens, GI51599156, Length=508, Percent_Identity=31.2992125984252, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI58331268, Length=546, Percent_Identity=30.2197802197802, Blast_Score=213, Evalue=5e-55, Organism=Homo sapiens, GI58219008, Length=531, Percent_Identity=30.1318267419962, Blast_Score=210, Evalue=4e-54, Organism=Homo sapiens, GI40807471, Length=603, Percent_Identity=28.1923714759536, Blast_Score=203, Evalue=7e-52, Organism=Homo sapiens, GI216548193, Length=528, Percent_Identity=28.7878787878788, Blast_Score=198, Evalue=2e-50, Organism=Homo sapiens, GI216548186, Length=528, Percent_Identity=28.7878787878788, Blast_Score=198, Evalue=2e-50, Organism=Homo sapiens, GI190358536, Length=524, Percent_Identity=27.2900763358779, Blast_Score=196, Evalue=1e-49, Organism=Homo sapiens, GI190358532, Length=524, Percent_Identity=27.2900763358779, Blast_Score=196, Evalue=1e-49, Organism=Homo sapiens, GI190358534, Length=524, Percent_Identity=27.2900763358779, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI114326455, Length=513, Percent_Identity=27.6803118908382, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI282165704, Length=513, Percent_Identity=27.6803118908382, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI95147342, Length=512, Percent_Identity=28.515625, Blast_Score=179, Evalue=1e-44, Organism=Homo sapiens, GI29244924, Length=506, Percent_Identity=28.4584980237154, Blast_Score=178, Evalue=2e-44, Organism=Homo sapiens, GI146219843, Length=340, Percent_Identity=31.4705882352941, Blast_Score=176, Evalue=7e-44, Organism=Homo sapiens, GI54112403, Length=507, Percent_Identity=28.2051282051282, Blast_Score=174, Evalue=3e-43, Organism=Homo sapiens, GI38708321, Length=324, Percent_Identity=32.4074074074074, Blast_Score=169, Evalue=1e-41, Organism=Homo sapiens, GI56549696, Length=297, Percent_Identity=32.996632996633, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI62860046, Length=499, Percent_Identity=25.6513026052104, Blast_Score=132, Evalue=2e-30, Organism=Homo sapiens, GI187761314, Length=485, Percent_Identity=27.6288659793814, Blast_Score=122, Evalue=2e-27, Organism=Homo sapiens, GI21071060, Length=485, Percent_Identity=27.6288659793814, Blast_Score=122, Evalue=2e-27, Organism=Homo sapiens, GI21071052, Length=245, Percent_Identity=29.3877551020408, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI21071054, Length=245, Percent_Identity=29.3877551020408, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI168823443, Length=171, Percent_Identity=32.1637426900585, Blast_Score=87, Evalue=7e-17, Organism=Homo sapiens, GI20336209, Length=183, Percent_Identity=30.6010928961749, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI20336205, Length=183, Percent_Identity=30.6010928961749, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI289547541, Length=92, Percent_Identity=39.1304347826087, Blast_Score=68, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193204424, Length=524, Percent_Identity=33.0152671755725, Blast_Score=229, Evalue=4e-60, Organism=Caenorhabditis elegans, GI17539642, Length=479, Percent_Identity=32.3590814196242, Blast_Score=228, Evalue=9e-60, Organism=Caenorhabditis elegans, GI32563629, Length=471, Percent_Identity=34.1825902335456, Blast_Score=228, Evalue=1e-59, Organism=Caenorhabditis elegans, GI25144179, Length=468, Percent_Identity=32.2649572649573, Blast_Score=225, Evalue=8e-59, Organism=Caenorhabditis elegans, GI17551114, Length=460, Percent_Identity=31.9565217391304, Blast_Score=220, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17569817, Length=505, Percent_Identity=29.5049504950495, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17562600, Length=487, Percent_Identity=29.1581108829569, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71988744, Length=537, Percent_Identity=27.9329608938547, Blast_Score=206, Evalue=5e-53, Organism=Caenorhabditis elegans, GI71991518, Length=505, Percent_Identity=27.9207920792079, Blast_Score=202, Evalue=9e-52, Organism=Caenorhabditis elegans, GI17508659, Length=528, Percent_Identity=28.9772727272727, Blast_Score=199, Evalue=8e-51, Organism=Caenorhabditis elegans, GI115534248, Length=310, Percent_Identity=31.6129032258064, Blast_Score=170, Evalue=3e-42, Organism=Caenorhabditis elegans, GI193203140, Length=499, Percent_Identity=28.8577154308617, Blast_Score=169, Evalue=7e-42, Organism=Caenorhabditis elegans, GI71995707, Length=513, Percent_Identity=27.4853801169591, Blast_Score=166, Evalue=5e-41, Organism=Caenorhabditis elegans, GI17540630, Length=143, Percent_Identity=41.958041958042, Blast_Score=122, Evalue=1e-27, Organism=Caenorhabditis elegans, GI193203249, Length=143, Percent_Identity=41.2587412587413, Blast_Score=119, Evalue=9e-27, Organism=Caenorhabditis elegans, GI17561718, Length=137, Percent_Identity=38.6861313868613, Blast_Score=98, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71980419, Length=147, Percent_Identity=29.9319727891156, Blast_Score=75, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6325175, Length=554, Percent_Identity=31.0469314079422, Blast_Score=262, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6324879, Length=498, Percent_Identity=32.5301204819277, Blast_Score=247, Evalue=8e-66, Organism=Saccharomyces cerevisiae, GI6324864, Length=489, Percent_Identity=32.1063394683027, Blast_Score=238, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6319722, Length=480, Percent_Identity=31.4583333333333, Blast_Score=227, Evalue=5e-60, Organism=Saccharomyces cerevisiae, GI6322495, Length=529, Percent_Identity=28.7334593572779, Blast_Score=226, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6321012, Length=498, Percent_Identity=32.9317269076305, Blast_Score=222, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6321153, Length=557, Percent_Identity=27.6481149012567, Blast_Score=219, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6321275, Length=505, Percent_Identity=30.0990099009901, Blast_Score=209, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6322065, Length=491, Percent_Identity=29.938900203666, Blast_Score=208, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6319547, Length=497, Percent_Identity=28.3702213279678, Blast_Score=185, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6320541, Length=320, Percent_Identity=33.125, Blast_Score=176, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321289, Length=325, Percent_Identity=32.6153846153846, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6319300, Length=267, Percent_Identity=29.9625468164794, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324765, Length=157, Percent_Identity=36.3057324840764, Blast_Score=117, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6319590, Length=246, Percent_Identity=31.7073170731707, Blast_Score=112, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6323060, Length=135, Percent_Identity=37.037037037037, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI281361889, Length=546, Percent_Identity=30.7692307692308, Blast_Score=249, Evalue=6e-66, Organism=Drosophila melanogaster, GI24653134, Length=490, Percent_Identity=31.2244897959184, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24653132, Length=490, Percent_Identity=31.2244897959184, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI17737463, Length=490, Percent_Identity=31.2244897959184, Blast_Score=226, Evalue=4e-59, Organism=Drosophila melanogaster, GI24664907, Length=484, Percent_Identity=30.9917355371901, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI28574896, Length=484, Percent_Identity=30.9917355371901, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24664914, Length=484, Percent_Identity=30.9917355371901, Blast_Score=224, Evalue=2e-58, Organism=Drosophila melanogaster, GI17985967, Length=484, Percent_Identity=30.9917355371901, Blast_Score=224, Evalue=2e-58, Organism=Drosophila melanogaster, GI281366478, Length=495, Percent_Identity=30.3030303030303, Blast_Score=220, Evalue=4e-57, Organism=Drosophila melanogaster, GI24667055, Length=495, Percent_Identity=30.3030303030303, Blast_Score=220, Evalue=4e-57, Organism=Drosophila melanogaster, GI62472261, Length=495, Percent_Identity=30.3030303030303, Blast_Score=220, Evalue=4e-57, Organism=Drosophila melanogaster, GI17136368, Length=525, Percent_Identity=29.3333333333333, Blast_Score=215, Evalue=1e-55, Organism=Drosophila melanogaster, GI24666729, Length=499, Percent_Identity=29.4589178356713, Blast_Score=214, Evalue=2e-55, Organism=Drosophila melanogaster, GI17137266, Length=477, Percent_Identity=31.6561844863732, Blast_Score=206, Evalue=6e-53, Organism=Drosophila melanogaster, GI85724914, Length=515, Percent_Identity=29.5145631067961, Blast_Score=206, Evalue=7e-53, Organism=Drosophila melanogaster, GI24583161, Length=515, Percent_Identity=29.5145631067961, Blast_Score=205, Evalue=1e-52, Organism=Drosophila melanogaster, GI24656966, Length=309, Percent_Identity=32.6860841423948, Blast_Score=181, Evalue=3e-45, Organism=Drosophila melanogaster, GI24656962, Length=309, Percent_Identity=32.6860841423948, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI28573600, Length=309, Percent_Identity=32.6860841423948, Blast_Score=180, Evalue=4e-45, Organism=Drosophila melanogaster, GI221330583, Length=482, Percent_Identity=29.045643153527, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI17986031, Length=482, Percent_Identity=29.045643153527, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI24648168, Length=321, Percent_Identity=31.7757009345794, Blast_Score=165, Evalue=1e-40, Organism=Drosophila melanogaster, GI85724912, Length=335, Percent_Identity=30.4477611940298, Blast_Score=139, Evalue=7e-33, Organism=Drosophila melanogaster, GI24644932, Length=202, Percent_Identity=34.1584158415842, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI24581780, Length=435, Percent_Identity=25.9770114942529, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI281361297, Length=148, Percent_Identity=38.5135135135135, Blast_Score=97, Evalue=5e-20, Organism=Drosophila melanogaster, GI62484263, Length=199, Percent_Identity=31.1557788944724, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI21356675, Length=135, Percent_Identity=37.7777777777778, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI24650076, Length=135, Percent_Identity=37.7777777777778, Blast_Score=86, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR022138 - InterPro: IPR000330 [H]
Pfam domain/function: PF12419 DUF3670; PF00271 Helicase_C; PF00176 SNF2_N [H]
EC number: 3.6.1.- [C]
Molecular weight: Translated: 98327; Mature: 98196
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVPVTGPATFRAADPPREGVVEFTDDRRTVSLPIRAALPVLTKARSRDDLHPSVGVLS CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHH GAALLALRLVAAGKFAPAGSSPPAWRVAGLDADDEQRIVLLARNGPDDEQLVRDLLDAVA HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH DAMPRTQPRTQPRSRPSAEPSGTTVSRERRPTFEERLQARLARHQRVDARALPQLVTISL HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCEEEEEE RVEADEEELVAGAVRLVAQAHDEQNPLHLCDLALLWTGTPQEHGFGERARTHATIALRAA EEECCHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHEEEEEEEEC ADAWPVLDRLLELRVPDQLTLDSDELVSLLDEGVGALRAAGVDVLWPKALGRDLTATTVL CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHCCCCHHHHHH DRAAPMTREEPLNEPVLGAEALFAFNWQIALHGDPLTAEEMDRLATSASPLLRLRGSWTV HHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEECCCEEE VDPSIARKAKKRLVRTVKPAEAVAAALTGTAQIAAPGGEQSEQDVVVGASLLKVRDRLLG ECHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH AATREPVEPPAALRATLRDYQRHGLTWLAEMTSLGLGACLADDMGLGKTVTLIALHLHRA HHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHH ERGHRGPTLVVCPASLLGNWEAEVRRFAPGVPVVRFHGTSRDVEAAGDGFVLTTYGTMRR HCCCCCCEEEEECHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHH DAEALGSVRWDLVVADEAQHVKNPRTATARALRSITSAARVALTGTPVENDLTELWAILD HHHHHCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH WTTPGLLGSRNAFRKAWAAPIESGREPAKARQFADLIGPFLLRRRKSDPGIAPELPAKTE CCCCCCCCCCHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TDHPLRLTREQVVLYESFVRDTMARIERADPSDPVARRGLVLTLLTGLKQICNHPDHFLK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH RSGARLSGRSEKVDLLDELVGTVLAEDGAVLVFTQYVAMARLLEGHLARAGVPHQLLHGG HCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHCCC TPVREREAMVARFQAGETPVFLLSLKAGGTGLNLTRADHVVHVDRWWNPAVEEQATDRAY CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHH RIGQTKPVQVHRMITRGTVEEKVAELLTRKRALADAVLSRGEAALTELSDDELRDFVALR HCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHC RDP CCC >Mature Secondary Structure SFVPVTGPATFRAADPPREGVVEFTDDRRTVSLPIRAALPVLTKARSRDDLHPSVGVLS CCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHH GAALLALRLVAAGKFAPAGSSPPAWRVAGLDADDEQRIVLLARNGPDDEQLVRDLLDAVA HHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH DAMPRTQPRTQPRSRPSAEPSGTTVSRERRPTFEERLQARLARHQRVDARALPQLVTISL HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCEEEEEE RVEADEEELVAGAVRLVAQAHDEQNPLHLCDLALLWTGTPQEHGFGERARTHATIALRAA EEECCHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHEEEEEEEEC ADAWPVLDRLLELRVPDQLTLDSDELVSLLDEGVGALRAAGVDVLWPKALGRDLTATTVL CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECHHHHCCCCHHHHHH DRAAPMTREEPLNEPVLGAEALFAFNWQIALHGDPLTAEEMDRLATSASPLLRLRGSWTV HHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEECCCEEE VDPSIARKAKKRLVRTVKPAEAVAAALTGTAQIAAPGGEQSEQDVVVGASLLKVRDRLLG ECHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHH AATREPVEPPAALRATLRDYQRHGLTWLAEMTSLGLGACLADDMGLGKTVTLIALHLHRA HHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHH ERGHRGPTLVVCPASLLGNWEAEVRRFAPGVPVVRFHGTSRDVEAAGDGFVLTTYGTMRR HCCCCCCEEEEECHHHHCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHH DAEALGSVRWDLVVADEAQHVKNPRTATARALRSITSAARVALTGTPVENDLTELWAILD HHHHHCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH WTTPGLLGSRNAFRKAWAAPIESGREPAKARQFADLIGPFLLRRRKSDPGIAPELPAKTE CCCCCCCCCCHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC TDHPLRLTREQVVLYESFVRDTMARIERADPSDPVARRGLVLTLLTGLKQICNHPDHFLK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH RSGARLSGRSEKVDLLDELVGTVLAEDGAVLVFTQYVAMARLLEGHLARAGVPHQLLHGG HCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHCCC TPVREREAMVARFQAGETPVFLLSLKAGGTGLNLTRADHVVHVDRWWNPAVEEQATDRAY CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHH RIGQTKPVQVHRMITRGTVEEKVAELLTRKRALADAVLSRGEAALTELSDDELRDFVALR HCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHC RDP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9353933 [H]