| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714402
Identifier: 119714402
GI number: 119714402
Start: 149285
End: 149956
Strand: Direct
Name: 119714402
Synonym: Noca_0135
Alternate gene names: NA
Gene position: 149285-149956 (Clockwise)
Preceding gene: 119714401
Following gene: 119714405
Centisome position: 2.99
GC content: 77.23
Gene sequence:
>672_bases ATGACCTCGCAGGACGACTCCCCGGACGACGGCCGCCGGGCGGCGGAGCTGGGCGAGCGGCTGGCCGCCTGGCTGGAGGA GCTCGGGCTCGGCGCGCACCTGGCCGCGGCCGGGCTGCCGACCTGCGAGCGCGACGAGCACGGCCGGGCCGCGTGGACCG ACCCGAACACCGGCCTGCCGATGACCGGCGAGCAGCTCGAGGACCTCGAGCGGCTGCTGCGCAGCGAGGGAGCCGACCCG CAGCACGCCGTACCCGTGCAGCTGGTGCAGATCGCCCGGCGGGCGCGGGTGCGCCAGGAGCTGCTCGACAGCGCTTGGTA CGACTACGAGTCGCTGGCCGAGCTGCGCGGCACCTCGGTCGACGCGACCAGGTTCGCCGTGCACAAGGCCGAGGGCGAGC ACCGGCTGCTCGTGGTCGCCGCCGACGCGCGCACCCTCGTGCCCGCCTTCCAGCTCACGCCCGAGGGCAACCTGCGACCC GAGCTCGGGCCCGTGCTCACGTCGCTGCTCGCCGCCCGGATGGATCCGTGGCAGGCCTGGGCGTGGCTCACCCAGCCCGC GGGGCTGCTCGGCGGCGAGGTGCCCGAACGCGCGGCGGCCGATCCCGAGACGGCCGACGTGGTGCAGCGTGCGGCCGCCC GGCTGGCCGAGCGGGCCGGCGCCCGGCCCTGA
Upstream 100 bases:
>100_bases GCCTGCGGACCGACCCGGAGGGCTGGTCGCAGCGCGTCGTCGGCTTCCTCGACGCCGCCCTGGTCGGTCCCCGCTGACCC GGGTGCGGCAGGCTGGGGGC
Downstream 100 bases:
>100_bases CCCGCGCCGGCTCGCGGGACGTCATACGGACAGTGTGTCCCCCTCCACCGTCCGTATGACCTCTCGCGTGGTCCCGCGGA GGTGACGGGGCGAGGCTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTSQDDSPDDGRRAAELGERLAAWLEELGLGAHLAAAGLPTCERDEHGRAAWTDPNTGLPMTGEQLEDLERLLRSEGADP QHAVPVQLVQIARRARVRQELLDSAWYDYESLAELRGTSVDATRFAVHKAEGEHRLLVVAADARTLVPAFQLTPEGNLRP ELGPVLTSLLAARMDPWQAWAWLTQPAGLLGGEVPERAAADPETADVVQRAAARLAERAGARP
Sequences:
>Translated_223_residues MTSQDDSPDDGRRAAELGERLAAWLEELGLGAHLAAAGLPTCERDEHGRAAWTDPNTGLPMTGEQLEDLERLLRSEGADP QHAVPVQLVQIARRARVRQELLDSAWYDYESLAELRGTSVDATRFAVHKAEGEHRLLVVAADARTLVPAFQLTPEGNLRP ELGPVLTSLLAARMDPWQAWAWLTQPAGLLGGEVPERAAADPETADVVQRAAARLAERAGARP >Mature_222_residues TSQDDSPDDGRRAAELGERLAAWLEELGLGAHLAAAGLPTCERDEHGRAAWTDPNTGLPMTGEQLEDLERLLRSEGADPQ HAVPVQLVQIARRARVRQELLDSAWYDYESLAELRGTSVDATRFAVHKAEGEHRLLVVAADARTLVPAFQLTPEGNLRPE LGPVLTSLLAARMDPWQAWAWLTQPAGLLGGEVPERAAADPETADVVQRAAARLAERAGARP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24197; Mature: 24066
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQDDSPDDGRRAAELGERLAAWLEELGLGAHLAAAGLPTCERDEHGRAAWTDPNTGLP CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCC MTGEQLEDLERLLRSEGADPQHAVPVQLVQIARRARVRQELLDSAWYDYESLAELRGTSV CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC DATRFAVHKAEGEHRLLVVAADARTLVPAFQLTPEGNLRPELGPVLTSLLAARMDPWQAW CHHHHHHHHCCCCCEEEEEECCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCHHHHH AWLTQPAGLLGGEVPERAAADPETADVVQRAAARLAERAGARP HHHHCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSQDDSPDDGRRAAELGERLAAWLEELGLGAHLAAAGLPTCERDEHGRAAWTDPNTGLP CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEECCCCCCCC MTGEQLEDLERLLRSEGADPQHAVPVQLVQIARRARVRQELLDSAWYDYESLAELRGTSV CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC DATRFAVHKAEGEHRLLVVAADARTLVPAFQLTPEGNLRPELGPVLTSLLAARMDPWQAW CHHHHHHHHCCCCCEEEEEECCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCHHHHH AWLTQPAGLLGGEVPERAAADPETADVVQRAAARLAERAGARP HHHHCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA