| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714376
Identifier: 119714376
GI number: 119714376
Start: 121874
End: 124267
Strand: Direct
Name: 119714376
Synonym: Noca_0109
Alternate gene names: NA
Gene position: 121874-124267 (Clockwise)
Preceding gene: 119714374
Following gene: 119714377
Centisome position: 2.44
GC content: 76.19
Gene sequence:
>2394_bases GTGGCGCCTCGGTTGGTACGCCCGGACCCCCGGGCCGGGCGTTCCCGACCGCGAGCCTGGAGCCTCCCGCGGCCACCGGC CCGGCGCCCTCGCGGCCCGGCTGACCGGGTGGCCCGGTCGCGGGATTCCGGTGAGCCGGCCGCCGCGACCCGCCAGACTG GGACCGTGGACCGTCCGACCCTGCGCCGGCTGTTCCCGCGCCGGGTCGCGATCGTGTGCGCGGCGGTCCTGGTCGTCCAG GGAGTCGGGCTCGCGCTGCTGGTCCGCGACGTCCGCGAGCCACGCCCGCACCAGGTGCCGGTCGCCGTCGTCGGACCGGC CGTCGTCGCCCAGGGCCTGGCGGAGCAGGTCAACGCGCTCGAGGGCCGGCCGCTCGACGTCACCGCGAGCGCGGATCGGG AAGCGGCCGTCGACGACGTACGGCACGGCCTCACCGTCGGCGCCGCGCTCATCGATCTCACGGGCACCCAGGACCAGGTG GTCCTCGACGGCTCGACCGACGAACGGCTCGCCCGGGCCGTGGTGGAGCAGGCCCGGGCGATCGAGCGCTCGCACGGCCG CACGCTGTCGGTCCGCCGCGTCTCGATGTCCGACGTCGACGACGACGTCGTCCGCGGCCTGGCGGTCGGCTTCGGCGCGG TGGGCTTCGTGGTGGCGCTGGCGCTCTCGCTGCGCTTCGGGCCGACCGCGCGCACCCTCCGGCTGGGAACCCGGCGGGTG CTGGTGGTCGCGGCGATCTCCCTGGTGAGCGGGTACGCCGCCACGCTGCTGCCCGGCGTGAGCACCCTCGACACCGGTGC CCAGCTGCGCCTCGCGGGAGTCCTGGCCCTGACCGCGGCGGTCGCCGGGACGGTCACGCTCGCCCTGGAGGGCGTGGCCG GGTTCGGCGGCCTGGGCCTGAGCGCGGTCTTCTACCTGGTGGTGGCGACGCCGCAGCTGCTCGGCACCGACCCGCACCTG CTCCCGGCGCCGTGGCCGGTGCTCTCGCAGTGGCTCCCGCCGGGGGCGAGCGTCGAGGCGCTCGGCGCGATCGCGCTGTA CGGCGGCACCGGCATCCGGCTGCCCCTGCTGGTGCTCGCCGTGTGGCTGCTGGCCGCCGTCCTCGCGCTGCAGGTCTCGC GCCGGGAGCGGGTCCGCGAGCAGACCGCGCCCGACGCCGGCCTGGACGAGCCGCTGCTGCTGCACCCGCCGCTGACGCCG GTGGTGCGGCACGGCCGGCTGGTGCGCTGGCGCTGGCGGGTCGGGGTCGTGGTGCTGCCGGCCGCCGGGGCGGCGTTCGT CCTGGTGTCGTTCGTCCCGCGTGACGCCGTCGCGGACGTCGCGCCGGTCGCCAGCCGCGCCAGCGAGACCGAGTGCGTCT CGACCGGCACGGTCCGCAGCGTGGCGGACCTCAACCGGATGGTGCGCACGGTGCGCGGCGGCCCGGAGTTCCAGGGCGGT GACGTCGGTGCCGACACCGAGCTGCAGGACGGCCGGCGGGTGATGGTCTTCGGCGACACGCTGCGCAGCCCGTCCTTCGC CGGCCAACGCTTCGTGCGCAACTCGATGCTGCTCATCGGCGGCGAGTGCATCCAGGCCGTCGTGCCCGAGGACCACGGGG CGCTGATCCCGGACCGGCCGAGCGCGCAGTCCGCCGGCCGGGTCGGCTACTGGCCGATGTCCGCGGTGACGATCACCCAT CCGGGCTACGACCTGGTCGTGGTGACCGCGCAGCGGGTGCGGAGCACCGGCATCGACGACGCGTTCGGCTTCGAGAGCCT CGGGCCCGCGGTCGCGGTCTTCGTGGTCCCCCGGGGCGAGACCCCGCAGCTGGTCGCGGTACGCGACGTCGGGCCGGACG CCGCCGATGTCACCCGCCCGGAGTGGGGCGCGGCGGCTGTGGTCGAGGGCGAATGGCTCTACCTCTACGGCACCGCGAAC CCGGACCAGCCCTACGTCTTCGGCTTCTCGCTGCGGGTCGCGCGGGTGCACCCGGACGACGTGCTGCGGCCCGCTGCCTG GGAGTACTGGTCGGGCACCGACTGGGTCGCAGACCCGGCGCAGAGCCGGGAGCTGATCCCGGCCGCGGGCGGGACGTCGC AGACGCTCTCGGTGTTCCGCGACGGTGGGCAGTGGCACGCGCTGAGCAAGCGCAACGAGTTCCTCGGCAGCGACGTGGTC GTGTGGACCGCGCCGGACCCGTGGGGCCCGTTCGACGGCGGGCGCACCGTCGCCCCGCTGCCCTCGGACGCCGCCCAGGG GCGGCTGCGGTACCTGCCGCTCGCGCACCCGGGGCTGCTGCCCGAGCCCGGCACCGTCGTGGTCTCGTTCAGCCGCAACC GCACCGACGTCGACGAGGTGGTCGCGGACCCGACCCGCTACCGGCCGGGCTTCCTCAGGGTGGACCTGCCGTAG
Upstream 100 bases:
>100_bases ACCAACCTATCCAACGGCCGGGGTCAGGTCGGCAGGTGGCTCAGGCGCCGGGAGATGCGGGCGGCGGTGACGACCACCAC CCGCGCCAGCGCGCCGACCC
Downstream 100 bases:
>100_bases CCGGCCATACTGTCCGGCATGGGTGATCCGAGGTGAGCAGCGGACGGCGCCGGTCGGCCTTCGTGCTCCTGCTGCTGGCC GTGCTGGTCAACCTGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 797; Mature: 796
Protein sequence:
>797_residues MAPRLVRPDPRAGRSRPRAWSLPRPPARRPRGPADRVARSRDSGEPAAATRQTGTVDRPTLRRLFPRRVAIVCAAVLVVQ GVGLALLVRDVREPRPHQVPVAVVGPAVVAQGLAEQVNALEGRPLDVTASADREAAVDDVRHGLTVGAALIDLTGTQDQV VLDGSTDERLARAVVEQARAIERSHGRTLSVRRVSMSDVDDDVVRGLAVGFGAVGFVVALALSLRFGPTARTLRLGTRRV LVVAAISLVSGYAATLLPGVSTLDTGAQLRLAGVLALTAAVAGTVTLALEGVAGFGGLGLSAVFYLVVATPQLLGTDPHL LPAPWPVLSQWLPPGASVEALGAIALYGGTGIRLPLLVLAVWLLAAVLALQVSRRERVREQTAPDAGLDEPLLLHPPLTP VVRHGRLVRWRWRVGVVVLPAAGAAFVLVSFVPRDAVADVAPVASRASETECVSTGTVRSVADLNRMVRTVRGGPEFQGG DVGADTELQDGRRVMVFGDTLRSPSFAGQRFVRNSMLLIGGECIQAVVPEDHGALIPDRPSAQSAGRVGYWPMSAVTITH PGYDLVVVTAQRVRSTGIDDAFGFESLGPAVAVFVVPRGETPQLVAVRDVGPDAADVTRPEWGAAAVVEGEWLYLYGTAN PDQPYVFGFSLRVARVHPDDVLRPAAWEYWSGTDWVADPAQSRELIPAAGGTSQTLSVFRDGGQWHALSKRNEFLGSDVV VWTAPDPWGPFDGGRTVAPLPSDAAQGRLRYLPLAHPGLLPEPGTVVVSFSRNRTDVDEVVADPTRYRPGFLRVDLP
Sequences:
>Translated_797_residues MAPRLVRPDPRAGRSRPRAWSLPRPPARRPRGPADRVARSRDSGEPAAATRQTGTVDRPTLRRLFPRRVAIVCAAVLVVQ GVGLALLVRDVREPRPHQVPVAVVGPAVVAQGLAEQVNALEGRPLDVTASADREAAVDDVRHGLTVGAALIDLTGTQDQV VLDGSTDERLARAVVEQARAIERSHGRTLSVRRVSMSDVDDDVVRGLAVGFGAVGFVVALALSLRFGPTARTLRLGTRRV LVVAAISLVSGYAATLLPGVSTLDTGAQLRLAGVLALTAAVAGTVTLALEGVAGFGGLGLSAVFYLVVATPQLLGTDPHL LPAPWPVLSQWLPPGASVEALGAIALYGGTGIRLPLLVLAVWLLAAVLALQVSRRERVREQTAPDAGLDEPLLLHPPLTP VVRHGRLVRWRWRVGVVVLPAAGAAFVLVSFVPRDAVADVAPVASRASETECVSTGTVRSVADLNRMVRTVRGGPEFQGG DVGADTELQDGRRVMVFGDTLRSPSFAGQRFVRNSMLLIGGECIQAVVPEDHGALIPDRPSAQSAGRVGYWPMSAVTITH PGYDLVVVTAQRVRSTGIDDAFGFESLGPAVAVFVVPRGETPQLVAVRDVGPDAADVTRPEWGAAAVVEGEWLYLYGTAN PDQPYVFGFSLRVARVHPDDVLRPAAWEYWSGTDWVADPAQSRELIPAAGGTSQTLSVFRDGGQWHALSKRNEFLGSDVV VWTAPDPWGPFDGGRTVAPLPSDAAQGRLRYLPLAHPGLLPEPGTVVVSFSRNRTDVDEVVADPTRYRPGFLRVDLP >Mature_796_residues APRLVRPDPRAGRSRPRAWSLPRPPARRPRGPADRVARSRDSGEPAAATRQTGTVDRPTLRRLFPRRVAIVCAAVLVVQG VGLALLVRDVREPRPHQVPVAVVGPAVVAQGLAEQVNALEGRPLDVTASADREAAVDDVRHGLTVGAALIDLTGTQDQVV LDGSTDERLARAVVEQARAIERSHGRTLSVRRVSMSDVDDDVVRGLAVGFGAVGFVVALALSLRFGPTARTLRLGTRRVL VVAAISLVSGYAATLLPGVSTLDTGAQLRLAGVLALTAAVAGTVTLALEGVAGFGGLGLSAVFYLVVATPQLLGTDPHLL PAPWPVLSQWLPPGASVEALGAIALYGGTGIRLPLLVLAVWLLAAVLALQVSRRERVREQTAPDAGLDEPLLLHPPLTPV VRHGRLVRWRWRVGVVVLPAAGAAFVLVSFVPRDAVADVAPVASRASETECVSTGTVRSVADLNRMVRTVRGGPEFQGGD VGADTELQDGRRVMVFGDTLRSPSFAGQRFVRNSMLLIGGECIQAVVPEDHGALIPDRPSAQSAGRVGYWPMSAVTITHP GYDLVVVTAQRVRSTGIDDAFGFESLGPAVAVFVVPRGETPQLVAVRDVGPDAADVTRPEWGAAAVVEGEWLYLYGTANP DQPYVFGFSLRVARVHPDDVLRPAAWEYWSGTDWVADPAQSRELIPAAGGTSQTLSVFRDGGQWHALSKRNEFLGSDVVV WTAPDPWGPFDGGRTVAPLPSDAAQGRLRYLPLAHPGLLPEPGTVVVSFSRNRTDVDEVVADPTRYRPGFLRVDLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84643; Mature: 84512
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPRLVRPDPRAGRSRPRAWSLPRPPARRPRGPADRVARSRDSGEPAAATRQTGTVDRPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHH LRRLFPRRVAIVCAAVLVVQGVGLALLVRDVREPRPHQVPVAVVGPAVVAQGLAEQVNAL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHH EGRPLDVTASADREAAVDDVRHGLTVGAALIDLTGTQDQVVLDGSTDERLARAVVEQARA CCCCEEEECCCCCHHHHHHHHHHHHHCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH IERSHGRTLSVRRVSMSDVDDDVVRGLAVGFGAVGFVVALALSLRFGPTARTLRLGTRRV HHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHH LVVAAISLVSGYAATLLPGVSTLDTGAQLRLAGVLALTAAVAGTVTLALEGVAGFGGLGL HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHH SAVFYLVVATPQLLGTDPHLLPAPWPVLSQWLPPGASVEALGAIALYGGTGIRLPLLVLA HHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHH VWLLAAVLALQVSRRERVREQTAPDAGLDEPLLLHPPLTPVVRHGRLVRWRWRVGVVVLP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHCCCEEEEEEEEEEEEEC AAGAAFVLVSFVPRDAVADVAPVASRASETECVSTGTVRSVADLNRMVRTVRGGPEFQGG CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC DVGADTELQDGRRVMVFGDTLRSPSFAGQRFVRNSMLLIGGECIQAVVPEDHGALIPDRP CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEECHHHHHEECCCCCCCCCCCCC SAQSAGRVGYWPMSAVTITHPGYDLVVVTAQRVRSTGIDDAFGFESLGPAVAVFVVPRGE CCCCCCCCEECCCEEEEEECCCCEEEEEEHHHHHHCCCCCCCCCHHCCCEEEEEEEECCC TPQLVAVRDVGPDAADVTRPEWGAAAVVEGEWLYLYGTANPDQPYVFGFSLRVARVHPDD CCCEEEEEECCCCHHHCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEEEEECHHH VLRPAAWEYWSGTDWVADPAQSRELIPAAGGTSQTLSVFRDGGQWHALSKRNEFLGSDVV HCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCEEECCHHHHHCCCCEE VWTAPDPWGPFDGGRTVAPLPSDAAQGRLRYLPLAHPGLLPEPGTVVVSFSRNRTDVDEV EEECCCCCCCCCCCCEECCCCCHHHCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHH VADPTRYRPGFLRVDLP HCCCCCCCCCEEEEECC >Mature Secondary Structure APRLVRPDPRAGRSRPRAWSLPRPPARRPRGPADRVARSRDSGEPAAATRQTGTVDRPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHH LRRLFPRRVAIVCAAVLVVQGVGLALLVRDVREPRPHQVPVAVVGPAVVAQGLAEQVNAL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHH EGRPLDVTASADREAAVDDVRHGLTVGAALIDLTGTQDQVVLDGSTDERLARAVVEQARA CCCCEEEECCCCCHHHHHHHHHHHHHCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHH IERSHGRTLSVRRVSMSDVDDDVVRGLAVGFGAVGFVVALALSLRFGPTARTLRLGTRRV HHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHH LVVAAISLVSGYAATLLPGVSTLDTGAQLRLAGVLALTAAVAGTVTLALEGVAGFGGLGL HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHH SAVFYLVVATPQLLGTDPHLLPAPWPVLSQWLPPGASVEALGAIALYGGTGIRLPLLVLA HHHHHHHHHCHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHH VWLLAAVLALQVSRRERVREQTAPDAGLDEPLLLHPPLTPVVRHGRLVRWRWRVGVVVLP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCHHHHHCCCEEEEEEEEEEEEEC AAGAAFVLVSFVPRDAVADVAPVASRASETECVSTGTVRSVADLNRMVRTVRGGPEFQGG CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC DVGADTELQDGRRVMVFGDTLRSPSFAGQRFVRNSMLLIGGECIQAVVPEDHGALIPDRP CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCEEEECHHHHHEECCCCCCCCCCCCC SAQSAGRVGYWPMSAVTITHPGYDLVVVTAQRVRSTGIDDAFGFESLGPAVAVFVVPRGE CCCCCCCCEECCCEEEEEECCCCEEEEEEHHHHHHCCCCCCCCCHHCCCEEEEEEEECCC TPQLVAVRDVGPDAADVTRPEWGAAAVVEGEWLYLYGTANPDQPYVFGFSLRVARVHPDD CCCEEEEEECCCCHHHCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEEEEECHHH VLRPAAWEYWSGTDWVADPAQSRELIPAAGGTSQTLSVFRDGGQWHALSKRNEFLGSDVV HCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCEEECCHHHHHCCCCEE VWTAPDPWGPFDGGRTVAPLPSDAAQGRLRYLPLAHPGLLPEPGTVVVSFSRNRTDVDEV EEECCCCCCCCCCCCEECCCCCHHHCCCEEEEECCCCCCCCCCCEEEEEECCCCCCHHHH VADPTRYRPGFLRVDLP HCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA