| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is gutB [H]
Identifier: 119714375
GI number: 119714375
Start: 120754
End: 121770
Strand: Reverse
Name: gutB [H]
Synonym: Noca_0108
Alternate gene names: 119714375
Gene position: 121770-120754 (Counterclockwise)
Preceding gene: 119714378
Following gene: 119714372
Centisome position: 2.44
GC content: 76.7
Gene sequence:
>1017_bases GTGCCCGTCGCCGCCCGGCTCCACTCCGTCGGCGACCTGCGGGTCGAGCAGGTCGCCGAGCCGCCCGCTCCCACCGTCGG CTGGTCGACCGTCGCGGTCACCTCGGTCGGGCTCTGCGGCTCCGACCTGCACTGGTTCACCGACGGCGGCACCGGCGAGG TCACGCTCGACCGACCGGTGGTCCCGGGCCACGAGCTCGCCGGGCGCGCACTGGACGGGCCGTACGCCGGGCGCCGGGTC GCGATCGACCCCGCGATCCCGTGCGGGGTCTGCGAGCAGTGCCGCGCCGGGCACGGGAACCTGTGTCCCGACGTGCGCTT CGCCGGGCACGCCGGCCTGGACGGCGGCCTCCAGGAGCGGCTGGTCTGGCCCGACCACCTGCTGTTCCCGCTCCCGGACG ACCTCAGCGACGATGCGGGCGCGCTGCTCGAGCCGCTCGGGGTCGCGATCCACGCGGTCGGGGTGGCGCACGTCCGCCCC GGCCACGACGTACTGGTGGTGGGCGGCGGCCCGATCGGGGTGCTCACTGCCGCGGTGGCTCGCCGTACCGGCGCCGCCCA GGTGGTCGTGAGCGAGCCGCTCGCGCACCGGCGCGAGACCGCACGCCGCTTCGGCGCCGACGTCGCGGTCGCACCGGAGG AGGCCTCGTCCGCGGTCGACGAGCTGACCGGCGGGCGCGGCGTCGACGTGGTCATCGAGATGGCGGGGGCGGACGACGCC ATCGGCACCGCCGTCGCCTGCGCGCGCCCGGGCGCCCGGATCGCGCTGGGCGGCATCCCGTCGGTGCCGCTGTCCTCGTT CCCCGCCGCACCCGCCCGGCGCAAGGGCCTGACCTTCGCGATGGTCCGCCGGATGCACGAGACCTACCCGCGCGCGATCG AGCTCGCCACGAGCGGCATCGACCTCGACGCCCTGGTCAGCGACCGCTTCCCGCTCGCCGACGCACCCCTCGCCTTCACC CACGCCGTCGCCCGCACCGGCGACAAGACCGTCATCGCGGTGTCCGGCACCCGTTGA
Upstream 100 bases:
>100_bases TCGGCGCGCTGGCGCGGGTGGTGGTCGTCACCGCCGCCCGCATCTCCCGGCGCCTGAGCCACCTGCCGACCTGACCCCGG CCGTTGGATAGGTTGGTGGC
Downstream 100 bases:
>100_bases TCCCCGACTCGACGGGGGCGGGTTCAGTCGGCGTCGAGCGCGGTCAGCTCCTCGTCGGTGAGGTCGAGCTCGGCGGCGGC TGCGGAGTCCTGGATCGACT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPVAARLHSVGDLRVEQVAEPPAPTVGWSTVAVTSVGLCGSDLHWFTDGGTGEVTLDRPVVPGHELAGRALDGPYAGRRV AIDPAIPCGVCEQCRAGHGNLCPDVRFAGHAGLDGGLQERLVWPDHLLFPLPDDLSDDAGALLEPLGVAIHAVGVAHVRP GHDVLVVGGGPIGVLTAAVARRTGAAQVVVSEPLAHRRETARRFGADVAVAPEEASSAVDELTGGRGVDVVIEMAGADDA IGTAVACARPGARIALGGIPSVPLSSFPAAPARRKGLTFAMVRRMHETYPRAIELATSGIDLDALVSDRFPLADAPLAFT HAVARTGDKTVIAVSGTR
Sequences:
>Translated_338_residues MPVAARLHSVGDLRVEQVAEPPAPTVGWSTVAVTSVGLCGSDLHWFTDGGTGEVTLDRPVVPGHELAGRALDGPYAGRRV AIDPAIPCGVCEQCRAGHGNLCPDVRFAGHAGLDGGLQERLVWPDHLLFPLPDDLSDDAGALLEPLGVAIHAVGVAHVRP GHDVLVVGGGPIGVLTAAVARRTGAAQVVVSEPLAHRRETARRFGADVAVAPEEASSAVDELTGGRGVDVVIEMAGADDA IGTAVACARPGARIALGGIPSVPLSSFPAAPARRKGLTFAMVRRMHETYPRAIELATSGIDLDALVSDRFPLADAPLAFT HAVARTGDKTVIAVSGTR >Mature_337_residues PVAARLHSVGDLRVEQVAEPPAPTVGWSTVAVTSVGLCGSDLHWFTDGGTGEVTLDRPVVPGHELAGRALDGPYAGRRVA IDPAIPCGVCEQCRAGHGNLCPDVRFAGHAGLDGGLQERLVWPDHLLFPLPDDLSDDAGALLEPLGVAIHAVGVAHVRPG HDVLVVGGGPIGVLTAAVARRTGAAQVVVSEPLAHRRETARRFGADVAVAPEEASSAVDELTGGRGVDVVIEMAGADDAI GTAVACARPGARIALGGIPSVPLSSFPAAPARRKGLTFAMVRRMHETYPRAIELATSGIDLDALVSDRFPLADAPLAFTH AVARTGDKTVIAVSGTR
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=327, Percent_Identity=35.7798165137615, Blast_Score=163, Evalue=2e-40, Organism=Escherichia coli, GI1790045, Length=328, Percent_Identity=32.9268292682927, Blast_Score=157, Evalue=8e-40, Organism=Escherichia coli, GI1788073, Length=339, Percent_Identity=31.858407079646, Blast_Score=154, Evalue=8e-39, Organism=Escherichia coli, GI1790718, Length=323, Percent_Identity=30.030959752322, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI1787863, Length=302, Percent_Identity=29.4701986754967, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1788407, Length=282, Percent_Identity=30.8510638297872, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI226510992, Length=305, Percent_Identity=30.8196721311475, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788075, Length=346, Percent_Identity=26.878612716763, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1786825, Length=393, Percent_Identity=25.4452926208651, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082125, Length=245, Percent_Identity=28.9795918367347, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87081918, Length=249, Percent_Identity=30.5220883534137, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17562876, Length=344, Percent_Identity=35.7558139534884, Blast_Score=188, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17562878, Length=349, Percent_Identity=35.5300859598854, Blast_Score=177, Evalue=5e-45, Organism=Saccharomyces cerevisiae, GI6319955, Length=350, Percent_Identity=33.4285714285714, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6322619, Length=350, Percent_Identity=33.4285714285714, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6323099, Length=323, Percent_Identity=32.5077399380805, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6319257, Length=346, Percent_Identity=28.0346820809249, Blast_Score=114, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6319258, Length=244, Percent_Identity=31.5573770491803, Blast_Score=106, Evalue=4e-24, Organism=Drosophila melanogaster, GI17137530, Length=332, Percent_Identity=31.9277108433735, Blast_Score=157, Evalue=9e-39, Organism=Drosophila melanogaster, GI17737897, Length=341, Percent_Identity=32.258064516129, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI45550770, Length=299, Percent_Identity=27.4247491638796, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI45551930, Length=299, Percent_Identity=27.4247491638796, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI221457811, Length=299, Percent_Identity=27.4247491638796, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 34745; Mature: 34614
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVAARLHSVGDLRVEQVAEPPAPTVGWSTVAVTSVGLCGSDLHWFTDGGTGEVTLDRPV CCHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEECCCC VPGHELAGRALDGPYAGRRVAIDPAIPCGVCEQCRAGHGNLCPDVRFAGHAGLDGGLQER CCCHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCEECCCCCCCCCCHHH LVWPDHLLFPLPDDLSDDAGALLEPLGVAIHAVGVAHVRPGHDVLVVGGGPIGVLTAAVA EECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHHHHHHHHH RRTGAAQVVVSEPLAHRRETARRFGADVAVAPEEASSAVDELTGGRGVDVVIEMAGADDA HCCCCEEEEECCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCH IGTAVACARPGARIALGGIPSVPLSSFPAAPARRKGLTFAMVRRMHETYPRAIELATSGI HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCEEEHHHCCC DLDALVSDRFPLADAPLAFTHAVARTGDKTVIAVSGTR CHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure PVAARLHSVGDLRVEQVAEPPAPTVGWSTVAVTSVGLCGSDLHWFTDGGTGEVTLDRPV CHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEECCCC VPGHELAGRALDGPYAGRRVAIDPAIPCGVCEQCRAGHGNLCPDVRFAGHAGLDGGLQER CCCHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCCCEECCCCCCCCCCHHH LVWPDHLLFPLPDDLSDDAGALLEPLGVAIHAVGVAHVRPGHDVLVVGGGPIGVLTAAVA EECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCHHHHHHHHH RRTGAAQVVVSEPLAHRRETARRFGADVAVAPEEASSAVDELTGGRGVDVVIEMAGADDA HCCCCEEEEECCHHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCH IGTAVACARPGARIALGGIPSVPLSSFPAAPARRKGLTFAMVRRMHETYPRAIELATSGI HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHCCCEEEHHHCCC DLDALVSDRFPLADAPLAFTHAVARTGDKTVIAVSGTR CHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1460002; 9384377; 8195086 [H]