Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714373

Identifier: 119714373

GI number: 119714373

Start: 119154

End: 119783

Strand: Direct

Name: 119714373

Synonym: Noca_0106

Alternate gene names: NA

Gene position: 119154-119783 (Clockwise)

Preceding gene: 119714371

Following gene: 119714374

Centisome position: 2.39

GC content: 73.97

Gene sequence:

>630_bases
ATGCCCCAAGGGTGCGTGCTTCCTAGCGTCGATCGGGTGACCAGTGCTCGCATCCACCACCCCACCAGCCGCGGCGCCGT
CGTCGCGCTCCTCGGTGCCCTGCTGACTCTCGCCGCCTGCGGCGACGGGACCGGGGCCGCCCCCGCTGCAACGCAGGGGC
GACCCCAGGCTCACGAGCGGTCGGCAGCGCCGGAGTCGGCCCGCCTCGACCGCGTCGGTCTCGAACCGGGCCGCCTGGGC
ATCGGCCGGGTCGACGTCGCCCGGCTCGAGCCGGACCTGCGCGCTGCCCTGGAGGAGGCCACCCGGGCTGCCGAGGCGGA
CGGAGTCGTGATCGAGGTGACCAGCGGGTGGCGCAGCTGGGAGCACCAGGAGCGGCTGCTCGACGAGGCGGTGGTGAAGT
ACGGAAGCCTGGACGAAGCGCTCGAGTGCGTCTCGACCCCGGAGGCCTCGGCCCACGTGACGGGGGACGCGGTCGACATC
GGCCCGGCCGAGGCAGCCGGTTGGCTGAGCCGGCACGGCTCGGCGTACGGCCTGTGCCAGATCTTCGCCAACGAGGACTG
GCACTTCGAGCTCGCGACGACGCCCGGCGGCGAATGCCCGCCGATGTACGCCGACGCCAGCCAGCGCTAG

Upstream 100 bases:

>100_bases
ACGCGGTCGGTCACGAGGTAGCTGGGACGACCCGACCCCGGTGCCGAGGAGGGGACCAGGTGCTCTGGCCGCGAGGCGGA
CCCGGCGGTACTGCGGGCCG

Downstream 100 bases:

>100_bases
CGGCCTCGACCCGACACCGACCGCTCGAGGCCGCCGACCGGCCTGCTGGTAGGACAGGGACCATGAGGATTCGCAGCATC
GGCAACGAGACCGTCGGCCG

Product: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins

Products: NA

Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase; VanY-Type Carboxypeptidase; D-Alanyl-D-Alanine Carboxypeptidase Family Protein; M15 Family Peptidase

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MPQGCVLPSVDRVTSARIHHPTSRGAVVALLGALLTLAACGDGTGAAPAATQGRPQAHERSAAPESARLDRVGLEPGRLG
IGRVDVARLEPDLRAALEEATRAAEADGVVIEVTSGWRSWEHQERLLDEAVVKYGSLDEALECVSTPEASAHVTGDAVDI
GPAEAAGWLSRHGSAYGLCQIFANEDWHFELATTPGGECPPMYADASQR

Sequences:

>Translated_209_residues
MPQGCVLPSVDRVTSARIHHPTSRGAVVALLGALLTLAACGDGTGAAPAATQGRPQAHERSAAPESARLDRVGLEPGRLG
IGRVDVARLEPDLRAALEEATRAAEADGVVIEVTSGWRSWEHQERLLDEAVVKYGSLDEALECVSTPEASAHVTGDAVDI
GPAEAAGWLSRHGSAYGLCQIFANEDWHFELATTPGGECPPMYADASQR
>Mature_208_residues
PQGCVLPSVDRVTSARIHHPTSRGAVVALLGALLTLAACGDGTGAAPAATQGRPQAHERSAAPESARLDRVGLEPGRLGI
GRVDVARLEPDLRAALEEATRAAEADGVVIEVTSGWRSWEHQERLLDEAVVKYGSLDEALECVSTPEASAHVTGDAVDIG
PAEAAGWLSRHGSAYGLCQIFANEDWHFELATTPGGECPPMYADASQR

Specific function: Unknown

COG id: COG1876

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21924; Mature: 21792

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQGCVLPSVDRVTSARIHHPTSRGAVVALLGALLTLAACGDGTGAAPAATQGRPQAHER
CCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
SAAPESARLDRVGLEPGRLGIGRVDVARLEPDLRAALEEATRAAEADGVVIEVTSGWRSW
CCCCCHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCH
EHQERLLDEAVVKYGSLDEALECVSTPEASAHVTGDAVDIGPAEAAGWLSRHGSAYGLCQ
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCEECCCHHHHHHHHHCCCCEEEEE
IFANEDWHFELATTPGGECPPMYADASQR
EEECCCEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PQGCVLPSVDRVTSARIHHPTSRGAVVALLGALLTLAACGDGTGAAPAATQGRPQAHER
CCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
SAAPESARLDRVGLEPGRLGIGRVDVARLEPDLRAALEEATRAAEADGVVIEVTSGWRSW
CCCCCHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCH
EHQERLLDEAVVKYGSLDEALECVSTPEASAHVTGDAVDIGPAEAAGWLSRHGSAYGLCQ
HHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEECCCCEECCCHHHHHHHHHCCCCEEEEE
IFANEDWHFELATTPGGECPPMYADASQR
EEECCCEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA