| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714342
Identifier: 119714342
GI number: 119714342
Start: 83161
End: 83565
Strand: Direct
Name: 119714342
Synonym: Noca_0074
Alternate gene names: NA
Gene position: 83161-83565 (Clockwise)
Preceding gene: 119714341
Following gene: 119714343
Centisome position: 1.67
GC content: 67.9
Gene sequence:
>405_bases GTGAGCGGCGCGGTGCCCACCGACCCGGGAACAGCGGCAGACCGAGCGGCGATCCGGCGACTGCTGGAGTCGCATCTGGA GTCGTGGAACCGGGGGGATCTCGACGCGCTCCTGGACACCTATCTCCAGGACGAGTCGGTGCGATATGCCTCGGCACGCA CGGTGATCCACGGGATCGAACGGGTCCGGGAACGTTTCCGCGAGGCCTACCCGGACCGAAGCCGGCTGGGGGAGCTTCGT TACGAGGGCCTCGAGATCGCCCTTGCAGGACGAGCGGACGCGGTCGTCTTCGGGCGCGCGCGGATCTCCAGGGAAGGACT CGAGGACTCCGTGAGCCTCTTCTCGCTGCATCTGTTCAAGCGCGGCGGTCAGTGGTGGATCGCGGCGGACCATACGTCGG CCTAG
Upstream 100 bases:
>100_bases TGGTCGAGGGATTCCTCGTCATCCACTATCCGAACCCGGCGGCACCCTCTGTCGCGATCAAGGTCGAGTCGCTGGACTCA CACGCCGACCGGAGGAAGCC
Downstream 100 bases:
>100_bases ACCTGCTCATGACAGCGGTGTTTCTTTCAATGAACATTCTTCCAATGGAGTGAACACTGTGGTAGACATCTCGCGTCTCG CAAGAAGCGACCAAGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSGAVPTDPGTAADRAAIRRLLESHLESWNRGDLDALLDTYLQDESVRYASARTVIHGIERVRERFREAYPDRSRLGELR YEGLEIALAGRADAVVFGRARISREGLEDSVSLFSLHLFKRGGQWWIAADHTSA
Sequences:
>Translated_134_residues MSGAVPTDPGTAADRAAIRRLLESHLESWNRGDLDALLDTYLQDESVRYASARTVIHGIERVRERFREAYPDRSRLGELR YEGLEIALAGRADAVVFGRARISREGLEDSVSLFSLHLFKRGGQWWIAADHTSA >Mature_133_residues SGAVPTDPGTAADRAAIRRLLESHLESWNRGDLDALLDTYLQDESVRYASARTVIHGIERVRERFREAYPDRSRLGELRY EGLEIALAGRADAVVFGRARISREGLEDSVSLFSLHLFKRGGQWWIAADHTSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15040; Mature: 14909
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAVPTDPGTAADRAAIRRLLESHLESWNRGDLDALLDTYLQDESVRYASARTVIHGIE CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH RVRERFREAYPDRSRLGELRYEGLEIALAGRADAVVFGRARISREGLEDSVSLFSLHLFK HHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCEEEEHHHHHHHHCHHHHHHHHHHHHHH RGGQWWIAADHTSA CCCCEEEECCCCCC >Mature Secondary Structure SGAVPTDPGTAADRAAIRRLLESHLESWNRGDLDALLDTYLQDESVRYASARTVIHGIE CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH RVRERFREAYPDRSRLGELRYEGLEIALAGRADAVVFGRARISREGLEDSVSLFSLHLFK HHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCEEEEHHHHHHHHCHHHHHHHHHHHHHH RGGQWWIAADHTSA CCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA