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The map label for this gene is arcB [H]

Identifier: 119714340

GI number: 119714340

Start: 81382

End: 82302

Strand: Reverse

Name: arcB [H]

Synonym: Noca_0072

Alternate gene names: 119714340

Gene position: 82302-81382 (Counterclockwise)

Preceding gene: 119714355

Following gene: 119714338

Centisome position: 1.65

GC content: 72.53

Gene sequence:

>921_bases
ATGCCACTGACCGGTCCCCGCTGGATCTCTTCTGACGAGGTGTACGCCAAACTGAGTTTCCGCGGCGGTGCTCGCGCCAT
CAGCGAGTCGCTGCGTCACGGCCTCGATCCTTCTGCCGATCCGGCGCGATCGATCGTCGACGTCTCCTGGGGTCAACTCC
TCATCATGCCTTCGGAGTTCGCCCGCTATGTCGGGGTCAAGATCGCGAGCGTGTCGCCGGACAACCCGACCCGAGGTCTC
CAGCGGATCCAGGGCCTCTACCTCCTGCTGGACGCCGTCACCTTGTCCCCCCTCGCGCAGCTGGACGGCGTGGCGCTGAC
GACGCTGCGCACGGCGGCGGTGTCCGCGGCCGCGGCCGAGGCGCTGGCGCCGGCACACGTGGAGCACCTCGTCGTGTTCG
GCTCCGGCCCGCAGGCATGGGGACATGCCGTGGCGCTCCGCGCCGTCCGTCCCGTCGACCGCGTCACGATCGTCGGGCGG
GACCCGCACCGCGCGGCGGCACTCGCCGACAAGCTGGACGACGGCGACTGCACCGCGACGGCGGGGTCCGCCGCGGCCGT
CGCCGAGGCCGACCTGGTCGTCTGCGCCACGACGGCCCGCTCCCCCGTGTTCGAACAGGCCGTCCGCGACGACGCCCTGC
TCATCGCGGTGGGCTCGCACGAGCCGGACGCCCGCGAGCTGCCCGGCGACGTGGTCGCGCGAGCGCAGGTCGTGGTGGAG
GACGAGGGCACCGCACTCCGCGAGGCCGGCGACGTGGCGATCCCGGTGTCCGAGCGCCGCCTCGACCCGGCCTCGCTCCT
CTCGCTCCGGTCGGTGGTCCGAGGCGACGTGGCCGTCGACCGCTCCCGCCTCCGCGTGTTCAAGAGCGTGGGGATGGCGT
GGGAGGACCTGGTCATCGCCTCAGCGATCTACGAGGCCTGA

Upstream 100 bases:

>100_bases
ATCGCCGGCGTCTCGTCGCAGTGCGAACAGCCGCGCGGTCCGGACAAGCCGTTCTATATAATGAATCATGATGTCAGCCC
ACCCATGGAGCCAACTCCAC

Downstream 100 bases:

>100_bases
ATTCAGCCGCGCGGGCCCCCGCGGTCCACGCTGCTCGAGGGTGTCGATGACGCGTGCCGGGACACCCCCGGGCTCCCCTC
GCGGCTGCCCTCTCGACCGT

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPLTGPRWISSDEVYAKLSFRGGARAISESLRHGLDPSADPARSIVDVSWGQLLIMPSEFARYVGVKIASVSPDNPTRGL
QRIQGLYLLLDAVTLSPLAQLDGVALTTLRTAAVSAAAAEALAPAHVEHLVVFGSGPQAWGHAVALRAVRPVDRVTIVGR
DPHRAAALADKLDDGDCTATAGSAAAVAEADLVVCATTARSPVFEQAVRDDALLIAVGSHEPDARELPGDVVARAQVVVE
DEGTALREAGDVAIPVSERRLDPASLLSLRSVVRGDVAVDRSRLRVFKSVGMAWEDLVIASAIYEA

Sequences:

>Translated_306_residues
MPLTGPRWISSDEVYAKLSFRGGARAISESLRHGLDPSADPARSIVDVSWGQLLIMPSEFARYVGVKIASVSPDNPTRGL
QRIQGLYLLLDAVTLSPLAQLDGVALTTLRTAAVSAAAAEALAPAHVEHLVVFGSGPQAWGHAVALRAVRPVDRVTIVGR
DPHRAAALADKLDDGDCTATAGSAAAVAEADLVVCATTARSPVFEQAVRDDALLIAVGSHEPDARELPGDVVARAQVVVE
DEGTALREAGDVAIPVSERRLDPASLLSLRSVVRGDVAVDRSRLRVFKSVGMAWEDLVIASAIYEA
>Mature_305_residues
PLTGPRWISSDEVYAKLSFRGGARAISESLRHGLDPSADPARSIVDVSWGQLLIMPSEFARYVGVKIASVSPDNPTRGLQ
RIQGLYLLLDAVTLSPLAQLDGVALTTLRTAAVSAAAAEALAPAHVEHLVVFGSGPQAWGHAVALRAVRPVDRVTIVGRD
PHRAAALADKLDDGDCTATAGSAAAVAEADLVVCATTARSPVFEQAVRDDALLIAVGSHEPDARELPGDVVARAQVVVED
EGTALREAGDVAIPVSERRLDPASLLSLRSVVRGDVAVDRSRLRVFKSVGMAWEDLVIASAIYEA

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=276, Percent_Identity=32.2463768115942, Blast_Score=106, Evalue=2e-23,
Organism=Homo sapiens, GI62241008, Length=276, Percent_Identity=32.2463768115942, Blast_Score=106, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 32169; Mature: 32038

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTGPRWISSDEVYAKLSFRGGARAISESLRHGLDPSADPARSIVDVSWGQLLIMPSEF
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHEEECCCCEEEEEHHHH
ARYVGVKIASVSPDNPTRGLQRIQGLYLLLDAVTLSPLAQLDGVALTTLRTAAVSAAAAE
HHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ALAPAHVEHLVVFGSGPQAWGHAVALRAVRPVDRVTIVGRDPHRAAALADKLDDGDCTAT
HHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCCC
AGSAAAVAEADLVVCATTARSPVFEQAVRDDALLIAVGSHEPDARELPGDVVARAQVVVE
CCCCHHHHHCCEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCHHHCCHHHEEEEEEEEE
DEGTALREAGDVAIPVSERRLDPASLLSLRSVVRGDVAVDRSRLRVFKSVGMAWEDLVIA
CCCCHHHCCCCEEEECHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHH
SAIYEA
HHHHCC
>Mature Secondary Structure 
PLTGPRWISSDEVYAKLSFRGGARAISESLRHGLDPSADPARSIVDVSWGQLLIMPSEF
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHEEECCCCEEEEEHHHH
ARYVGVKIASVSPDNPTRGLQRIQGLYLLLDAVTLSPLAQLDGVALTTLRTAAVSAAAAE
HHHHCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ALAPAHVEHLVVFGSGPQAWGHAVALRAVRPVDRVTIVGRDPHRAAALADKLDDGDCTAT
HHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCCCCCC
AGSAAAVAEADLVVCATTARSPVFEQAVRDDALLIAVGSHEPDARELPGDVVARAQVVVE
CCCCHHHHHCCEEEEEECCCCHHHHHHHCCCEEEEEECCCCCCHHHCCHHHEEEEEEEEE
DEGTALREAGDVAIPVSERRLDPASLLSLRSVVRGDVAVDRSRLRVFKSVGMAWEDLVIA
CCCCHHHCCCCEEEECHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHH
SAIYEA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9375792 [H]