| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714336
Identifier: 119714336
GI number: 119714336
Start: 76344
End: 77522
Strand: Reverse
Name: 119714336
Synonym: Noca_0068
Alternate gene names: NA
Gene position: 77522-76344 (Counterclockwise)
Preceding gene: 119714337
Following gene: 119714328
Centisome position: 1.55
GC content: 58.86
Gene sequence:
>1179_bases ATGGCAACAACCGTTTACGACGTCACCACCTGGACCGGCGCCACCGTCTCGCCTTACACCGATATCGGCCTGGTCATCAA CCAGATCATCGCTGACATCAAGAGCCAGCAGAACAGTCAGACGACCCGCCCTGGCGCCGTCATCTACATTCCTCCCGGTC ACTACACCCTGCAGACGACAGCCAACATCGACATTGGCTTCCTGACGATCAAGGGCTCCGGGCATGGCTTCATGTCCGAA GCAATCCGCGACGACGTGAACCACTCGGCCTGGGTCGAGACTCTCCCGGGCTCAAGCCATGTGCAGATCGCGAACAACAA CCAGGTCGGGTTCCTCGTCAACCGGGCCACCGACCCAGGGACGAACGGCCGACTCAACTCGATCGTCTTTCAGGACTTCT GCATCGACGGCGTCAGCAGTACCAAGCCCTACATTCCTGGAAACGGAAAGATCGGCATCAAGTCGCAGTACGACACCGAC TCCCTTCGAATCGAGGGGATGGGCTTCGTCTACCTCAACACAGCACTGACCATCCGCAATGCCGACGCCTTCAACATCAC CAACAACTTCATCGCTGAGTGCGGCAGCTCCATCCAGCTGACAGACAGCTCCATCGTCGGAAAGATCACCAACAACTACC TGATTAGCGCGTGGGCTGGGAACTCCATCTTCATCGAGAACAACGAGGACTGTGTCATCAGCGGGAACAGTCTCCTGTGG GGCGCTCGGATCCAGATGAAGAATGTCCATCGCGCAGTGATTACTGGCAACAAGTTCGTCAGCAACTTCTCCGGAATGAT CGTTCACGAAACTCCGTGCCACGAGCAGCTGATCTCGGGTAACCACTTCCGTCGCAAGTACGGCGACGGTGGCCCTGCCC GCAATGACGATCTCTTCGGCATGGTCCATCTCAACGGCAACGACAACTCCGTCACAGCCAATCACTTCGCGTTCGAGGTG CCGGCCGCCAACATCGTCCCCTCCGGAGCCACCCCCACGGTCGTCCTAGTCAAAGGTGGGGCCCGCAACTTCCTCGCCAC AAACAAGTTGGCGTCAAACGTCGCGGTACGCCACGTGCTCGACGCGAGTTCCACGGCCACGAAGGTTCTCTGGTCGGGCA CGGCGGCCCAACTCCAAGATCTGAGCGGGGGAAACATGTCCTTCGTGGCAACGCCGTGA
Upstream 100 bases:
>100_bases GGTCCGTCGCTCCCGCGAGCGCCGAGGTCGCCGCCTGGCAACCGCCGCCCGCCTACAGCCGCATCGTCGGCCTGATCTAG TCCGCAGGAGGTACGAGAAC
Downstream 100 bases:
>100_bases CAGATGTCCGGACGCGCAATGCTGACTTGAGCATGGGCCCCGCTTCGTGCCTCTGACGCACCTCACGGGTTGACAGAGTC CGGGCAGCCAGAAGCGCTGG
Product: inulin fructotransferase
Products: NA
Alternate protein names: Inulin fructotransferase [depolymerizing, difructofuranose-1,2':2',1-dianhydride-forming] [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MATTVYDVTTWTGATVSPYTDIGLVINQIIADIKSQQNSQTTRPGAVIYIPPGHYTLQTTANIDIGFLTIKGSGHGFMSE AIRDDVNHSAWVETLPGSSHVQIANNNQVGFLVNRATDPGTNGRLNSIVFQDFCIDGVSSTKPYIPGNGKIGIKSQYDTD SLRIEGMGFVYLNTALTIRNADAFNITNNFIAECGSSIQLTDSSIVGKITNNYLISAWAGNSIFIENNEDCVISGNSLLW GARIQMKNVHRAVITGNKFVSNFSGMIVHETPCHEQLISGNHFRRKYGDGGPARNDDLFGMVHLNGNDNSVTANHFAFEV PAANIVPSGATPTVVLVKGGARNFLATNKLASNVAVRHVLDASSTATKVLWSGTAAQLQDLSGGNMSFVATP
Sequences:
>Translated_392_residues MATTVYDVTTWTGATVSPYTDIGLVINQIIADIKSQQNSQTTRPGAVIYIPPGHYTLQTTANIDIGFLTIKGSGHGFMSE AIRDDVNHSAWVETLPGSSHVQIANNNQVGFLVNRATDPGTNGRLNSIVFQDFCIDGVSSTKPYIPGNGKIGIKSQYDTD SLRIEGMGFVYLNTALTIRNADAFNITNNFIAECGSSIQLTDSSIVGKITNNYLISAWAGNSIFIENNEDCVISGNSLLW GARIQMKNVHRAVITGNKFVSNFSGMIVHETPCHEQLISGNHFRRKYGDGGPARNDDLFGMVHLNGNDNSVTANHFAFEV PAANIVPSGATPTVVLVKGGARNFLATNKLASNVAVRHVLDASSTATKVLWSGTAAQLQDLSGGNMSFVATP >Mature_391_residues ATTVYDVTTWTGATVSPYTDIGLVINQIIADIKSQQNSQTTRPGAVIYIPPGHYTLQTTANIDIGFLTIKGSGHGFMSEA IRDDVNHSAWVETLPGSSHVQIANNNQVGFLVNRATDPGTNGRLNSIVFQDFCIDGVSSTKPYIPGNGKIGIKSQYDTDS LRIEGMGFVYLNTALTIRNADAFNITNNFIAECGSSIQLTDSSIVGKITNNYLISAWAGNSIFIENNEDCVISGNSLLWG ARIQMKNVHRAVITGNKFVSNFSGMIVHETPCHEQLISGNHFRRKYGDGGPARNDDLFGMVHLNGNDNSVTANHFAFEVP AANIVPSGATPTVVLVKGGARNFLATNKLASNVAVRHVLDASSTATKVLWSGTAAQLQDLSGGNMSFVATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011050 [H]
Pfam domain/function: NA
EC number: =4.2.2.17 [H]
Molecular weight: Translated: 41972; Mature: 41840
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTVYDVTTWTGATVSPYTDIGLVINQIIADIKSQQNSQTTRPGAVIYIPPGHYTLQTT CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEE ANIDIGFLTIKGSGHGFMSEAIRDDVNHSAWVETLPGSSHVQIANNNQVGFLVNRATDPG CCEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCC TNGRLNSIVFQDFCIDGVSSTKPYIPGNGKIGIKSQYDTDSLRIEGMGFVYLNTALTIRN CCCCCCEEEEEEHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEEEEEEC ADAFNITNNFIAECGSSIQLTDSSIVGKITNNYLISAWAGNSIFIENNEDCVISGNSLLW CCEEECCHHHHHHCCCEEEEECCCEEEEECCCEEEEEECCCEEEEECCCCEEEECCCEEE GARIQMKNVHRAVITGNKFVSNFSGMIVHETPCHEQLISGNHFRRKYGDGGPARNDDLFG EEEEEECCCEEEEEECCHHHHCCCCEEEECCCCHHHHHCCCCHHHHCCCCCCCCCCCEEE MVHLNGNDNSVTANHFAFEVPAANIVPSGATPTVVLVKGGARNFLATNKLASNVAVRHVL EEEEECCCCEEEECEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHEEEEE DASSTATKVLWSGTAAQLQDLSGGNMSFVATP CCCCCCEEEEECCCHHHHHHCCCCCEEEEECC >Mature Secondary Structure ATTVYDVTTWTGATVSPYTDIGLVINQIIADIKSQQNSQTTRPGAVIYIPPGHYTLQTT CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEE ANIDIGFLTIKGSGHGFMSEAIRDDVNHSAWVETLPGSSHVQIANNNQVGFLVNRATDPG CCEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEECCCEEEEEEECCCCCC TNGRLNSIVFQDFCIDGVSSTKPYIPGNGKIGIKSQYDTDSLRIEGMGFVYLNTALTIRN CCCCCCEEEEEEHCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEEEEEEC ADAFNITNNFIAECGSSIQLTDSSIVGKITNNYLISAWAGNSIFIENNEDCVISGNSLLW CCEEECCHHHHHHCCCEEEEECCCEEEEECCCEEEEEECCCEEEEECCCCEEEECCCEEE GARIQMKNVHRAVITGNKFVSNFSGMIVHETPCHEQLISGNHFRRKYGDGGPARNDDLFG EEEEEECCCEEEEEECCHHHHCCCCEEEECCCCHHHHHCCCCHHHHCCCCCCCCCCCEEE MVHLNGNDNSVTANHFAFEVPAANIVPSGATPTVVLVKGGARNFLATNKLASNVAVRHVL EEEEECCCCEEEECEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHEEEEE DASSTATKVLWSGTAAQLQDLSGGNMSFVATP CCCCCCEEEEECCCHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8534968 [H]