Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714328

Identifier: 119714328

GI number: 119714328

Start: 63995

End: 65443

Strand: Reverse

Name: 119714328

Synonym: Noca_0057

Alternate gene names: NA

Gene position: 65443-63995 (Counterclockwise)

Preceding gene: 119714336

Following gene: 119714327

Centisome position: 1.31

GC content: 66.11

Gene sequence:

>1449_bases
TTGCGCACGGCATCGGTCGAGTTCTACGATGGTCAAGCGCGCAAACGTTTCGACGGCAACCGTGCCCCGTGGGCACTTGA
AAGGACGATCATGAGTACTGACTTCCGCGGCGGCCTCCTGGGCGAGCTGACCTTGGCCCGCCCCGGGCGCACGGCCCGCG
CTTCCAGCTTCGACCAGACGGGACGCAACCGGGACAACTGGATCGTCATGCCAGGCGAGGAGCGCACGCTTGCCGACCTC
GAGGGGCCGGGCTTCATCACGCACATCTGGATGACCCAGTCCTGCCGGATCCAACCCGGGCCGAGCCAGATCGACCCCGC
GGGCGTGGGGGTTCCCATGCTCGAGATTCACAACGCGCTCGGGGTGAACTGGGAGGTCGTCGACCCGGACTACTACCGGA
AGATCCTGTTCAAGATCTACTGGGACGACCAGGAGACGCCCAGCGTCATCGCCCCACTGGGGGACTTCTTCGGGTTGATG
AACTCGCTGTCCGGCAGCTACGACTCACTGCCGCTCTCGGTCTCGGCCAAGGAGCCCGAGCTCCACACCTTCGGGGGCAG
CGCTGCGTTCAACTCCTACTTCCGCATGCCGTTCGCGAAGCGGGCTCGCGTAGTGGTCGAGAACCAGAACGACATCCCGT
ACCTCCAGTACTTCTACATCGACTACGAACTGTCCCCCACGGCCCTGCCGGAGGACACGGTGTACTTCCACGCGCACTGG
CGGCGTGCCCTCCCAAACGTCGGCTGGGGGCCTGACCTGCAGACCAACAGCATCGAGACCACGATCCCGAACCTGACCGG
TGCCGACAACTACGTCGCGCTCGAGACCGAGGGCCGTGGCCACTACGTCGGTTGCACCCTCGCGGTCCGGCACTTCCAGG
GGTCCTGGTGGGGCGAAGGCGACGACATGATCTTCATCGACGACGACACGTGGCCGCCCAGCCTGCACGGCACCGGCATG
GAGGACTACTTCGGCCACGCGTGGGGCATGCAGCGCAACGCCTACCAGTTCAACGGCACGATCGTCCACGAGGAAGACGT
GCCCGGGTTCCACCACAGCTACCGGTTCCACATGGTCGACCCCATCCGGTTCGAGAAGCGCATCAAGGTCACCTTCGAGC
ACGGGCACGGCAACCATCTCTCCGATGACTGGTCGTCGACCGCGTACTGGTACCAGACCCTCCCGTCGCCCGTGCTCGAG
GTGCCGGACGTCGACGACCGGCTGCCCCTGCGACCGGTGAACCGCGTGATCGAGGCTCCGCTGCCCGAACTTAGCGACGA
ACAGCGCACCGCTCGCGAGCGGGCCGACGAGCGGATGCGTCGCTTCGTAGAGGCACGGGACGCCTTGCGCGAGGAGCGCC
GAGGCGAGGTGGACGACTGGGAACGCGGCAACGTGGACCAGGCGCGGGCCATCCGGCGTTCCTACGACGCGGAACGCGAG
GGCAACTGA

Upstream 100 bases:

>100_bases
GATCGTGGCCATAAAGGCTCCATTCAAACGTTTGTACGTCGCCCGCCAGTTGGCCCTTGCGTCGTCTTCCTGCTGTTCAA
CATAGCGGGTTGGCCCGCCG

Downstream 100 bases:

>100_bases
TGCGGCCCCTGGTCCACTTCACTGCAGACGCCGGCTGGATCAATGACCCCCACGGCCTGACCTTCCACCGCGGCCGGTAT
CACCTGTTCCACCAGTACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MRTASVEFYDGQARKRFDGNRAPWALERTIMSTDFRGGLLGELTLARPGRTARASSFDQTGRNRDNWIVMPGEERTLADL
EGPGFITHIWMTQSCRIQPGPSQIDPAGVGVPMLEIHNALGVNWEVVDPDYYRKILFKIYWDDQETPSVIAPLGDFFGLM
NSLSGSYDSLPLSVSAKEPELHTFGGSAAFNSYFRMPFAKRARVVVENQNDIPYLQYFYIDYELSPTALPEDTVYFHAHW
RRALPNVGWGPDLQTNSIETTIPNLTGADNYVALETEGRGHYVGCTLAVRHFQGSWWGEGDDMIFIDDDTWPPSLHGTGM
EDYFGHAWGMQRNAYQFNGTIVHEEDVPGFHHSYRFHMVDPIRFEKRIKVTFEHGHGNHLSDDWSSTAYWYQTLPSPVLE
VPDVDDRLPLRPVNRVIEAPLPELSDEQRTARERADERMRRFVEARDALREERRGEVDDWERGNVDQARAIRRSYDAERE
GN

Sequences:

>Translated_482_residues
MRTASVEFYDGQARKRFDGNRAPWALERTIMSTDFRGGLLGELTLARPGRTARASSFDQTGRNRDNWIVMPGEERTLADL
EGPGFITHIWMTQSCRIQPGPSQIDPAGVGVPMLEIHNALGVNWEVVDPDYYRKILFKIYWDDQETPSVIAPLGDFFGLM
NSLSGSYDSLPLSVSAKEPELHTFGGSAAFNSYFRMPFAKRARVVVENQNDIPYLQYFYIDYELSPTALPEDTVYFHAHW
RRALPNVGWGPDLQTNSIETTIPNLTGADNYVALETEGRGHYVGCTLAVRHFQGSWWGEGDDMIFIDDDTWPPSLHGTGM
EDYFGHAWGMQRNAYQFNGTIVHEEDVPGFHHSYRFHMVDPIRFEKRIKVTFEHGHGNHLSDDWSSTAYWYQTLPSPVLE
VPDVDDRLPLRPVNRVIEAPLPELSDEQRTARERADERMRRFVEARDALREERRGEVDDWERGNVDQARAIRRSYDAERE
GN
>Mature_482_residues
MRTASVEFYDGQARKRFDGNRAPWALERTIMSTDFRGGLLGELTLARPGRTARASSFDQTGRNRDNWIVMPGEERTLADL
EGPGFITHIWMTQSCRIQPGPSQIDPAGVGVPMLEIHNALGVNWEVVDPDYYRKILFKIYWDDQETPSVIAPLGDFFGLM
NSLSGSYDSLPLSVSAKEPELHTFGGSAAFNSYFRMPFAKRARVVVENQNDIPYLQYFYIDYELSPTALPEDTVYFHAHW
RRALPNVGWGPDLQTNSIETTIPNLTGADNYVALETEGRGHYVGCTLAVRHFQGSWWGEGDDMIFIDDDTWPPSLHGTGM
EDYFGHAWGMQRNAYQFNGTIVHEEDVPGFHHSYRFHMVDPIRFEKRIKVTFEHGHGNHLSDDWSSTAYWYQTLPSPVLE
VPDVDDRLPLRPVNRVIEAPLPELSDEQRTARERADERMRRFVEARDALREERRGEVDDWERGNVDQARAIRRSYDAERE
GN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55270; Mature: 55270

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTASVEFYDGQARKRFDGNRAPWALERTIMSTDFRGGLLGELTLARPGRTARASSFDQT
CCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHC
GRNRDNWIVMPGEERTLADLEGPGFITHIWMTQSCRIQPGPSQIDPAGVGVPMLEIHNAL
CCCCCCEEEECCCCCEEECCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHH
GVNWEVVDPDYYRKILFKIYWDDQETPSVIAPLGDFFGLMNSLSGSYDSLPLSVSAKEPE
CCCEEEECHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
LHTFGGSAAFNSYFRMPFAKRARVVVENQNDIPYLQYFYIDYELSPTALPEDTVYFHAHW
EEECCCCHHHHHHHCCCHHHCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEH
RRALPNVGWGPDLQTNSIETTIPNLTGADNYVALETEGRGHYVGCTLAVRHFQGSWWGEG
HHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCC
DDMIFIDDDTWPPSLHGTGMEDYFGHAWGMQRNAYQFNGTIVHEEDVPGFHHSYRFHMVD
CCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCCCEEEEEEC
PIRFEKRIKVTFEHGHGNHLSDDWSSTAYWYQTLPSPVLEVPDVDDRLPLRPVNRVIEAP
CEEECEEEEEEEECCCCCCCCCCCCCCEEEEHHCCCCCEECCCCCCCCCCHHHHHHHHCC
LPELSDEQRTARERADERMRRFVEARDALREERRGEVDDWERGNVDQARAIRRSYDAERE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC
GN
CC
>Mature Secondary Structure
MRTASVEFYDGQARKRFDGNRAPWALERTIMSTDFRGGLLGELTLARPGRTARASSFDQT
CCCCEEEEECCCCHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHC
GRNRDNWIVMPGEERTLADLEGPGFITHIWMTQSCRIQPGPSQIDPAGVGVPMLEIHNAL
CCCCCCEEEECCCCCEEECCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHHHH
GVNWEVVDPDYYRKILFKIYWDDQETPSVIAPLGDFFGLMNSLSGSYDSLPLSVSAKEPE
CCCEEEECHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
LHTFGGSAAFNSYFRMPFAKRARVVVENQNDIPYLQYFYIDYELSPTALPEDTVYFHAHW
EEECCCCHHHHHHHCCCHHHCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEH
RRALPNVGWGPDLQTNSIETTIPNLTGADNYVALETEGRGHYVGCTLAVRHFQGSWWGEG
HHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEEECCCCCCCCC
DDMIFIDDDTWPPSLHGTGMEDYFGHAWGMQRNAYQFNGTIVHEEDVPGFHHSYRFHMVD
CCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEECCEEEECCCCCCCCCCEEEEEEC
PIRFEKRIKVTFEHGHGNHLSDDWSSTAYWYQTLPSPVLEVPDVDDRLPLRPVNRVIEAP
CEEECEEEEEEEECCCCCCCCCCCCCCEEEEHHCCCCCEECCCCCCCCCCHHHHHHHHCC
LPELSDEQRTARERADERMRRFVEARDALREERRGEVDDWERGNVDQARAIRRSYDAERE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC
GN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA