| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714323
Identifier: 119714323
GI number: 119714323
Start: 59586
End: 60119
Strand: Direct
Name: 119714323
Synonym: Noca_0052
Alternate gene names: NA
Gene position: 59586-60119 (Clockwise)
Preceding gene: 119714322
Following gene: 119714326
Centisome position: 1.2
GC content: 66.85
Gene sequence:
>534_bases ATGGCGACCGAAGAAGAGGACCCGCGCGACCGGGTGTGGCGGCTGCTCATGGAGAAAGAGCGCTACACGGACTGCCCGCG GGAGGTGATGGGCGCGCTGGATGCGCTCGGAGTGACCAACGACGTGGAGGTTGCGCACGCCGAACTCACCTACGACGACA CATCCGGTGCCACCGATTGGACAATCACGGCCGCCACCCGGTCCACGCTCATCCGGATTCGAGCCTCCGCCACCCGCGCG GACCGGCAGGTGTGGAGCGTCGGACGACACCGCGACTCAATCGAGTACACCGTGGCGCCAACCGTCGACGTAGACGTTCG ACCGTTGACCGACATCGAGCGAGTCGAGCTGAACAACGTCGGCGCCACGGACGCCTGGCAGCCCGGCGCCCAGGTCGTGC AGACCTGGACGTTCCACTTGCGCGGCGCAGACACCGTCGAACTCCGCGTCGACACCGGCGACCGGTTCCGGAGCGAGGCC GTTGGTCAGATCTGCTCGTTGTTCGCTCGCCAAGTGACATCCCGGTCGTCCTAG
Upstream 100 bases:
>100_bases CCGCACCTTCACGACGTGTCACGGGACCTGGCTGCCCGCATCGTCCAGACGCTGCGCCATCGACGCTGAGCGCCGCAGTA GGCCAACGACAGGAGCAACC
Downstream 100 bases:
>100_bases GTCCAAGCCGACGCACGGCTCGTCTCGGGAGCTCGGCGGGTCGACCAGTTGGACCGCGCAACATGCAGGAGACGCCTGTC GATGCGCCGACGCAGGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MATEEEDPRDRVWRLLMEKERYTDCPREVMGALDALGVTNDVEVAHAELTYDDTSGATDWTITAATRSTLIRIRASATRA DRQVWSVGRHRDSIEYTVAPTVDVDVRPLTDIERVELNNVGATDAWQPGAQVVQTWTFHLRGADTVELRVDTGDRFRSEA VGQICSLFARQVTSRSS
Sequences:
>Translated_177_residues MATEEEDPRDRVWRLLMEKERYTDCPREVMGALDALGVTNDVEVAHAELTYDDTSGATDWTITAATRSTLIRIRASATRA DRQVWSVGRHRDSIEYTVAPTVDVDVRPLTDIERVELNNVGATDAWQPGAQVVQTWTFHLRGADTVELRVDTGDRFRSEA VGQICSLFARQVTSRSS >Mature_176_residues ATEEEDPRDRVWRLLMEKERYTDCPREVMGALDALGVTNDVEVAHAELTYDDTSGATDWTITAATRSTLIRIRASATRAD RQVWSVGRHRDSIEYTVAPTVDVDVRPLTDIERVELNNVGATDAWQPGAQVVQTWTFHLRGADTVELRVDTGDRFRSEAV GQICSLFARQVTSRSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19868; Mature: 19737
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATEEEDPRDRVWRLLMEKERYTDCPREVMGALDALGVTNDVEVAHAELTYDDTSGATDW CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCE TITAATRSTLIRIRASATRADRQVWSVGRHRDSIEYTVAPTVDVDVRPLTDIERVELNNV EEEEECCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHEEEECCC GATDAWQPGAQVVQTWTFHLRGADTVELRVDTGDRFRSEAVGQICSLFARQVTSRSS CCCCCCCCCHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ATEEEDPRDRVWRLLMEKERYTDCPREVMGALDALGVTNDVEVAHAELTYDDTSGATDW CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCE TITAATRSTLIRIRASATRADRQVWSVGRHRDSIEYTVAPTVDVDVRPLTDIERVELNNV EEEEECCEEEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHEEEECCC GATDAWQPGAQVVQTWTFHLRGADTVELRVDTGDRFRSEAVGQICSLFARQVTSRSS CCCCCCCCCHHHHHHHHEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA