Click here to switch to the map view.

The map label for this gene is ylxW [H]

Identifier: 119714293

GI number: 119714293

Start: 22883

End: 23704

Strand: Direct

Name: ylxW [H]

Synonym: Noca_0021

Alternate gene names: 119714293

Gene position: 22883-23704 (Clockwise)

Preceding gene: 119714291

Following gene: 119714301

Centisome position: 0.46

GC content: 71.78

Gene sequence:

>822_bases
ATGCGCGGTCGAACCCATGCGAGGCCCCCGGAGCCGTCCGGTCCGGGTGCGCTGCGCACCCGCCTGGCACGCCGGTCCGT
CGACCGCCCGCGCAGCCTGTGGCGGATCGGCACCCCGGTGGTCGTGCTGCTGTGCGGCGCGCTGTTCGTCGTGAGCGCCG
CCAACAGCGACGGCACCGACCTGCGCCCGGGCCGCTACACCGACCTGGCCTCCCTGGTCCAGGACGAGGCGGACCAGTAC
GCCGAGCTGCAGCAGCGGCGCACCGAGCTCAACAACCAGGTCGCTGCGCTCTCGGCCGCGGTGAGCGACCGGGACGTGAA
CCGCTACCAGCGCCGGGTCGAGGAGCTCAAGGACCCGGCCGGCCTGGTGCCCCGCTCGGGACCGGGCATCTCGGTCACCC
TCTCCGATGCTCCCGAGGACGTCATCAACTCCACGACCGGCGACATCAACGAGCTGCTCGTCCACCAGCAGGACATCCAG
GCCGTGGTGAACGCCCTGTGGAAGGGCGGCGCGACCGCGGTCACCATCGCCGGTCAGCGGATCGTCTCGACGACCGGCAT
CAAGTGCGAGGGCAACGCGGTCCAGCTGCAGGGCGTCCCCTATCCCCAGCCCTACGTCATCCAGGCGGTCGGCGACCAGG
GCGCGCTGCTGACCGCGATCGAGGGCGACGGCTACGTCTCGGCGTACCGTGAGGACGCGGCCGACCCGGACATCTCCGTC
GGGTGGGAGCTCGACCTGGAGGAGCAGGTCACCGCACCGGCGTACGACGGCCTGCTCGACCTCAACTACGCGGAGCCGCT
CGTCCCCATCTCCGGGAGCTGA

Upstream 100 bases:

>100_bases
AGCAGCGGGCCCCGGGCAGGGGCGAGAGGATCGAGCTTGGCCTTGGCCACGGGTGCTCCTGGATCGATCGTGAGACGGGC
TGCGGGCTACCTTAGTCGGC

Downstream 100 bases:

>100_bases
CCGAGCGCGGCGACACGGCGCTCCGGTCGAGCACCGGCGGCGGGGGCTCCGTCGGGTTGTCGGTCGGCGACTCGCTCGGC
GTCGGCGACTCGGTCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MRGRTHARPPEPSGPGALRTRLARRSVDRPRSLWRIGTPVVVLLCGALFVVSAANSDGTDLRPGRYTDLASLVQDEADQY
AELQQRRTELNNQVAALSAAVSDRDVNRYQRRVEELKDPAGLVPRSGPGISVTLSDAPEDVINSTTGDINELLVHQQDIQ
AVVNALWKGGATAVTIAGQRIVSTTGIKCEGNAVQLQGVPYPQPYVIQAVGDQGALLTAIEGDGYVSAYREDAADPDISV
GWELDLEEQVTAPAYDGLLDLNYAEPLVPISGS

Sequences:

>Translated_273_residues
MRGRTHARPPEPSGPGALRTRLARRSVDRPRSLWRIGTPVVVLLCGALFVVSAANSDGTDLRPGRYTDLASLVQDEADQY
AELQQRRTELNNQVAALSAAVSDRDVNRYQRRVEELKDPAGLVPRSGPGISVTLSDAPEDVINSTTGDINELLVHQQDIQ
AVVNALWKGGATAVTIAGQRIVSTTGIKCEGNAVQLQGVPYPQPYVIQAVGDQGALLTAIEGDGYVSAYREDAADPDISV
GWELDLEEQVTAPAYDGLLDLNYAEPLVPISGS
>Mature_273_residues
MRGRTHARPPEPSGPGALRTRLARRSVDRPRSLWRIGTPVVVLLCGALFVVSAANSDGTDLRPGRYTDLASLVQDEADQY
AELQQRRTELNNQVAALSAAVSDRDVNRYQRRVEELKDPAGLVPRSGPGISVTLSDAPEDVINSTTGDINELLVHQQDIQ
AVVNALWKGGATAVTIAGQRIVSTTGIKCEGNAVQLQGVPYPQPYVIQAVGDQGALLTAIEGDGYVSAYREDAADPDISV
GWELDLEEQVTAPAYDGLLDLNYAEPLVPISGS

Specific function: May be involved in cell division and sporulation [H]

COG id: COG3879

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0749 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010273 [H]

Pfam domain/function: PF05949 DUF881 [H]

EC number: NA

Molecular weight: Translated: 29236; Mature: 29236

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGRTHARPPEPSGPGALRTRLARRSVDRPRSLWRIGTPVVVLLCGALFVVSAANSDGTD
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
LRPGRYTDLASLVQDEADQYAELQQRRTELNNQVAALSAAVSDRDVNRYQRRVEELKDPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLVPRSGPGISVTLSDAPEDVINSTTGDINELLVHQQDIQAVVNALWKGGATAVTIAGQR
CCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCE
IVSTTGIKCEGNAVQLQGVPYPQPYVIQAVGDQGALLTAIEGDGYVSAYREDAADPDISV
EECCCCEEECCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHCCCCCCCCC
GWELDLEEQVTAPAYDGLLDLNYAEPLVPISGS
CEEECHHHHCCCCCCCCEEECCCCCCCEECCCC
>Mature Secondary Structure
MRGRTHARPPEPSGPGALRTRLARRSVDRPRSLWRIGTPVVVLLCGALFVVSAANSDGTD
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
LRPGRYTDLASLVQDEADQYAELQQRRTELNNQVAALSAAVSDRDVNRYQRRVEELKDPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GLVPRSGPGISVTLSDAPEDVINSTTGDINELLVHQQDIQAVVNALWKGGATAVTIAGQR
CCCCCCCCCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCE
IVSTTGIKCEGNAVQLQGVPYPQPYVIQAVGDQGALLTAIEGDGYVSAYREDAADPDISV
EECCCCEEECCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHCCCCCCCCC
GWELDLEEQVTAPAYDGLLDLNYAEPLVPISGS
CEEECHHHHCCCCCCCCEEECCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2556375; 9384377; 12207695 [H]