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The map label for this gene is 119714277

Identifier: 119714277

GI number: 119714277

Start: 5506

End: 6072

Strand: Direct

Name: 119714277

Synonym: Noca_0005

Alternate gene names: NA

Gene position: 5506-6072 (Clockwise)

Preceding gene: 119714276

Following gene: 119714278

Centisome position: 0.11

GC content: 75.31

Gene sequence:

>567_bases
GTGAGCAGTGACGAGCCGCTCGGTTCGCAGCCCGCGGACCTGCCGGCGCCGGCAGGGGGGGCGGAGGCACCCGAGCACCA
CGACGACGGCCTCGACCTGGCCAAGGCGCTGACCCGCGCGACCGCGCGGTCCACCCCGGCCGCGCGCAAGAGGCTGCGCA
AGAAGGACACCCCCCGGCGGGGCCGGGCCTCCGGGGCCCATCCCGACGACCGGGACCCGCAGCTGCTCGACGCGACGCTC
AGCCGCCTGGTCGACGACCACGGCTGGGAGCTGGACCTGCGGGTGCACGGGGTCTTCGGCCGCTGGGCCGAGCTGGTCGG
CGCCGAGGTCGCCCGGCACACGACCCCGGAGTCCTTCACCGACGGTCGACTGGTCGTGCGCACCGACTCGACGGCCTGGG
CGACCCAGCTGCGACTGCTGGCCCCGACCGTGGTCCGCCGTCTCAACGAGGAGCTCGGCCACGGGACCGTGACCGTCATC
GAGGTGCTCGGCCCGCACGGTCCGACGTGGAAGAAGGGCCCGCGTTCGGTCCGCGACGGTCGCGGGCCACGAGACACCTA
CGGCTGA

Upstream 100 bases:

>100_bases
GCCGGCGCCGAGCAGGTGCTCGTCACGGCGGCCGTCGCGGCCGACGTCCCGGCCGGCCTCGCCGGCGCCCGCTTCGCAGT
CGGGAACGGCGAGGTCCTCC

Downstream 100 bases:

>100_bases
GGTCCGCCCGGGGCGATCGGGGCTCGACCAGCCCGGATGTGCCGATCTGGGGCGCCTCCGGACGTATAGGGACCCACCAC
CACCCCTGCTCGGCGCTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSSDEPLGSQPADLPAPAGGAEAPEHHDDGLDLAKALTRATARSTPAARKRLRKKDTPRRGRASGAHPDDRDPQLLDATL
SRLVDDHGWELDLRVHGVFGRWAELVGAEVARHTTPESFTDGRLVVRTDSTAWATQLRLLAPTVVRRLNEELGHGTVTVI
EVLGPHGPTWKKGPRSVRDGRGPRDTYG

Sequences:

>Translated_188_residues
MSSDEPLGSQPADLPAPAGGAEAPEHHDDGLDLAKALTRATARSTPAARKRLRKKDTPRRGRASGAHPDDRDPQLLDATL
SRLVDDHGWELDLRVHGVFGRWAELVGAEVARHTTPESFTDGRLVVRTDSTAWATQLRLLAPTVVRRLNEELGHGTVTVI
EVLGPHGPTWKKGPRSVRDGRGPRDTYG
>Mature_187_residues
SSDEPLGSQPADLPAPAGGAEAPEHHDDGLDLAKALTRATARSTPAARKRLRKKDTPRRGRASGAHPDDRDPQLLDATLS
RLVDDHGWELDLRVHGVFGRWAELVGAEVARHTTPESFTDGRLVVRTDSTAWATQLRLLAPTVVRRLNEELGHGTVTVIE
VLGPHGPTWKKGPRSVRDGRGPRDTYG

Specific function: Unknown

COG id: COG5512

COG function: function code R; Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0232 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007922
- InterPro:   IPR023007 [H]

Pfam domain/function: PF05258 DUF721 [H]

EC number: NA

Molecular weight: Translated: 20429; Mature: 20298

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDEPLGSQPADLPAPAGGAEAPEHHDDGLDLAKALTRATARSTPAARKRLRKKDTPRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
GRASGAHPDDRDPQLLDATLSRLVDDHGWELDLRVHGVFGRWAELVGAEVARHTTPESFT
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCC
DGRLVVRTDSTAWATQLRLLAPTVVRRLNEELGHGTVTVIEVLGPHGPTWKKGPRSVRDG
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHCC
RGPRDTYG
CCCCCCCC
>Mature Secondary Structure 
SSDEPLGSQPADLPAPAGGAEAPEHHDDGLDLAKALTRATARSTPAARKRLRKKDTPRR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC
GRASGAHPDDRDPQLLDATLSRLVDDHGWELDLRVHGVFGRWAELVGAEVARHTTPESFT
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCC
DGRLVVRTDSTAWATQLRLLAPTVVRRLNEELGHGTVTVIEVLGPHGPTWKKGPRSVRDG
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHCC
RGPRDTYG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]