| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119387211
Identifier: 119387211
GI number: 119387211
Start: 1720925
End: 1721704
Strand: Direct
Name: 119387211
Synonym: Pden_4506
Alternate gene names: NA
Gene position: 1720925-1721704 (Clockwise)
Preceding gene: 119387210
Following gene: 119387212
Centisome position: 99.47
GC content: 68.08
Gene sequence:
>780_bases ATGACGCCAGAGACGTCCTATTTCGCGACCCGTCTTGCCACGGACGAAGTCGACCTTCTGGCCGCGCAGCGCCTGCGCTA TCGCGTCTTCGTCGAGGAGCTGGGCGGTGACGGCCTGCTGGTCGACCATCAGGGCCGGTTCGAGCGGGACGAGTTCGACC CGGTCGTCGATCATCTGGTGCTGGTGGACAACCGCCGCTCGCGCGATGACCTGGACCATGTGGTCGGCGTCTATCGCCTG CTGCCGGGCGAGCGGGCCGAGGCGTTCGGCCGCTTCTATTGCGACAGCGAATATGACCTGGCGCCGCTGCGCGCCTCGGG GCGGTCGCTCCTGGAACTGGGCCGGTCCTGCGTCGACCCGGCCTATCGCGGCGGCTCGGGCATGTTCCTGATGTGGAACG CACTGGCCGATTACGTTCTGGCGCGCGGCATCGAGATCCTGTTCGGCGTCGCCTCGTTCCACGGCACAGACGTGCAGGCG CTGGCACAGCCGCTCAGCTGGCTGCACCATCACCACCTGGCCCCCGCGGCGATCCGGCCCCGCGCCCGGCCCGACGGCTT TCGCCGCATGGACCTGATCCCGGCCGAGCAACTGGATCGCCGCGCCGCGATGACCGGAATGCCGGCGCTGATCAAGGCCT ACCTGCGGCTGGGCGGCATGGTCGGCGAAGGCGCCTGGCTGGACCGCGCCTTCAACACCACCGACGTCTTCCTGATGGTC GACACCAAGGCCATGTCGGAAAAGCACCGCAAGTTCTACGAAACCCGGCAGGGGCAATGA
Upstream 100 bases:
>100_bases AATCGCCCTTGCATCGCCGGATTCGCGAGCGGTTGCAATGTCCCCTTCCCCCGCCTAGACACGGGACCAAATACCATCAG TCAGGGTTCCAGGCCGTAAG
Downstream 100 bases:
>100_bases GCGAGGGCAACCGCGCCACCTGGCGGGACGCGGTCGCGCCACCGGCCATTCCGCGTCCCGGCGCGCTCGGCTGGCTGCTG GTCCTGCTGCGCGGCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase; Ornithine-Acyl N-Acyltransferase
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTPETSYFATRLATDEVDLLAAQRLRYRVFVEELGGDGLLVDHQGRFERDEFDPVVDHLVLVDNRRSRDDLDHVVGVYRL LPGERAEAFGRFYCDSEYDLAPLRASGRSLLELGRSCVDPAYRGGSGMFLMWNALADYVLARGIEILFGVASFHGTDVQA LAQPLSWLHHHHLAPAAIRPRARPDGFRRMDLIPAEQLDRRAAMTGMPALIKAYLRLGGMVGEGAWLDRAFNTTDVFLMV DTKAMSEKHRKFYETRQGQ
Sequences:
>Translated_259_residues MTPETSYFATRLATDEVDLLAAQRLRYRVFVEELGGDGLLVDHQGRFERDEFDPVVDHLVLVDNRRSRDDLDHVVGVYRL LPGERAEAFGRFYCDSEYDLAPLRASGRSLLELGRSCVDPAYRGGSGMFLMWNALADYVLARGIEILFGVASFHGTDVQA LAQPLSWLHHHHLAPAAIRPRARPDGFRRMDLIPAEQLDRRAAMTGMPALIKAYLRLGGMVGEGAWLDRAFNTTDVFLMV DTKAMSEKHRKFYETRQGQ >Mature_258_residues TPETSYFATRLATDEVDLLAAQRLRYRVFVEELGGDGLLVDHQGRFERDEFDPVVDHLVLVDNRRSRDDLDHVVGVYRLL PGERAEAFGRFYCDSEYDLAPLRASGRSLLELGRSCVDPAYRGGSGMFLMWNALADYVLARGIEILFGVASFHGTDVQAL AQPLSWLHHHHLAPAAIRPRARPDGFRRMDLIPAEQLDRRAAMTGMPALIKAYLRLGGMVGEGAWLDRAFNTTDVFLMVD TKAMSEKHRKFYETRQGQ
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29270; Mature: 29139
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPETSYFATRLATDEVDLLAAQRLRYRVFVEELGGDGLLVDHQGRFERDEFDPVVDHLV CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHE LVDNRRSRDDLDHVVGVYRLLPGERAEAFGRFYCDSEYDLAPLRASGRSLLELGRSCVDP EECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCH AYRGGSGMFLMWNALADYVLARGIEILFGVASFHGTDVQALAQPLSWLHHHHLAPAAIRP HHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCC RARPDGFRRMDLIPAEQLDRRAAMTGMPALIKAYLRLGGMVGEGAWLDRAFNTTDVFLMV CCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEE DTKAMSEKHRKFYETRQGQ CCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TPETSYFATRLATDEVDLLAAQRLRYRVFVEELGGDGLLVDHQGRFERDEFDPVVDHLV CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHE LVDNRRSRDDLDHVVGVYRLLPGERAEAFGRFYCDSEYDLAPLRASGRSLLELGRSCVDP EECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCH AYRGGSGMFLMWNALADYVLARGIEILFGVASFHGTDVQALAQPLSWLHHHHLAPAAIRP HHCCCCCCEEHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHCCC RARPDGFRRMDLIPAEQLDRRAAMTGMPALIKAYLRLGGMVGEGAWLDRAFNTTDVFLMV CCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEE DTKAMSEKHRKFYETRQGQ CCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA