| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386994
Identifier: 119386994
GI number: 119386994
Start: 1465112
End: 1465765
Strand: Direct
Name: 119386994
Synonym: Pden_4289
Alternate gene names: NA
Gene position: 1465112-1465765 (Clockwise)
Preceding gene: 119386993
Following gene: 119386995
Centisome position: 84.68
GC content: 77.22
Gene sequence:
>654_bases GTGGCGCCTTTCGGACGGGCGCCAGTCCCCGCGCCGCCGCCGCAGCCGGCCGCGCCGATCCTGTCCGAAGCCTTTGGCAC CCGGCCCCTTGCAGGCGCGGCACCCGGTTTCGTGCTGGCCGCGCTGCCGCCGGGGCTGGTGCTCTGGGCGCAGGACCGGC TCAGCCGGGCCGAATTCGGCGCCCCCTTCCTGCCCGGCATGGGGCGGGACCTGCTGCGGCTGGACCTGACGCGCCCCGCC GATGTGCTGTCCGCGCTGGAGGACGGGCTGCAAAGCCGCGCCCTTGCCGCCGTGGTGGGCGAGATCCACGGCCCTGCCCC GGCGCTGAGCTTCACCGCCAGCCGCCGGCTTGCGCTGCGGGCCGAGGCGGCGGGCCTGCCCTGCTGGCTGATCCGCCATG CCGCCCGGCCCGAACCCAGCGCGGCACGGATGCGCTGGCGGCTGGCGCCGCTGCCCTCGGTCCCCGACCCCGACGATCCG CAGGCCCCGGGCGAGCCGCGCTGGCTGGCCGAATTGTTCCGCGCCCGCGGCCGGCCGTCCTCGACCTGGGTGGTGCGCCA TGACCGGGCGGCGGATCGTCTCGATTTCTCTGCCCCGCCTCGCGATCGAGAGCTGGCAGAGCCGCGCGACGCGCCGGGGC GACGCATGGCCTGA
Upstream 100 bases:
>100_bases GTCGTAGCAGCGCCGCAATTGACGAATCTTTGCCCGCACTATAAGAACAAATCAGGAACATATTGACTGAACCATGTCCG CTCGCCCTTTCCCTTTCGGG
Downstream 100 bases:
>100_bases GGACATCCCGCTGGCGCTGGCCGCGCCCGGCCCGCACGGACCCGTCATCCACGCCGCGAACCGCGCCGCCGAACGGGCCG GCGCCCGGATCGGCACCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAPFGRAPVPAPPPQPAAPILSEAFGTRPLAGAAPGFVLAALPPGLVLWAQDRLSRAEFGAPFLPGMGRDLLRLDLTRPA DVLSALEDGLQSRALAAVVGEIHGPAPALSFTASRRLALRAEAAGLPCWLIRHAARPEPSAARMRWRLAPLPSVPDPDDP QAPGEPRWLAELFRARGRPSSTWVVRHDRAADRLDFSAPPRDRELAEPRDAPGRRMA
Sequences:
>Translated_217_residues MAPFGRAPVPAPPPQPAAPILSEAFGTRPLAGAAPGFVLAALPPGLVLWAQDRLSRAEFGAPFLPGMGRDLLRLDLTRPA DVLSALEDGLQSRALAAVVGEIHGPAPALSFTASRRLALRAEAAGLPCWLIRHAARPEPSAARMRWRLAPLPSVPDPDDP QAPGEPRWLAELFRARGRPSSTWVVRHDRAADRLDFSAPPRDRELAEPRDAPGRRMA >Mature_216_residues APFGRAPVPAPPPQPAAPILSEAFGTRPLAGAAPGFVLAALPPGLVLWAQDRLSRAEFGAPFLPGMGRDLLRLDLTRPAD VLSALEDGLQSRALAAVVGEIHGPAPALSFTASRRLALRAEAAGLPCWLIRHAARPEPSAARMRWRLAPLPSVPDPDDPQ APGEPRWLAELFRARGRPSSTWVVRHDRAADRLDFSAPPRDRELAEPRDAPGRRMA
Specific function: Unknown
COG id: COG4544
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23295; Mature: 23164
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPFGRAPVPAPPPQPAAPILSEAFGTRPLAGAAPGFVLAALPPGLVLWAQDRLSRAEFG CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECHHHHHHHHCC APFLPGMGRDLLRLDLTRPADVLSALEDGLQSRALAAVVGEIHGPAPALSFTASRRLALR CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE AEAAGLPCWLIRHAARPEPSAARMRWRLAPLPSVPDPDDPQAPGEPRWLAELFRARGRPS HHCCCCHHHHHHHHCCCCCHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC STWVVRHDRAADRLDFSAPPRDRELAEPRDAPGRRMA CEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure APFGRAPVPAPPPQPAAPILSEAFGTRPLAGAAPGFVLAALPPGLVLWAQDRLSRAEFG CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECHHHHHHHHCC APFLPGMGRDLLRLDLTRPADVLSALEDGLQSRALAAVVGEIHGPAPALSFTASRRLALR CCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEE AEAAGLPCWLIRHAARPEPSAARMRWRLAPLPSVPDPDDPQAPGEPRWLAELFRARGRPS HHCCCCHHHHHHHHCCCCCHHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC STWVVRHDRAADRLDFSAPPRDRELAEPRDAPGRRMA CEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA