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The map label for this gene is yhbV [H]

Identifier: 119386934

GI number: 119386934

Start: 1390847

End: 1391737

Strand: Direct

Name: yhbV [H]

Synonym: Pden_4229

Alternate gene names: 119386934

Gene position: 1390847-1391737 (Clockwise)

Preceding gene: 119386933

Following gene: 119386935

Centisome position: 80.39

GC content: 71.49

Gene sequence:

>891_bases
ATGGACCTGACCGTCGGCCCCATCGCCTTTTTCTGGAGCGCGGAGCAGGTCCGCGCCTTCTACCGGACTTTGGCCGACAC
CCCCGTTCAGCGGGTGGTGATCGGCGAATGGGTCTGCTCGAAGCGCCTGCCCTTCTGGCAGCACGAAATCCCCGCCGCGG
TCGAGGTGCTGCTGGCCGCCGGCAAGGAGGTGGCGCTGTCAACGCTGACGCTGATCACGCTCAAGCGCGAGCGCCGGCAG
ACGGCCGAGCTGTTCGCATCCGGCCTGCCGGTCGAGATCGCCGATCTCAGCGCGCTGAAGCACCTGCCCGAAGGCGCGCC
CTTCTGGGTCGGCCCGACGGTCAACGTCTATAACGAGGGCACGCTGGAATGGCTGGCGGCGCGGGGCGCGCGGCGCATCT
GCCTGCCGCCGGAGCTGCCGCTGGAATCGGTCGCGCAACTGGCCCGCGCCGGACAGCAGGCGGGCGTCGCGGTCGAGGTC
TGGGGCCATGGCCGGGCGCCGCTGGCGATCTCGGGGCGCTGCTATCACGCGCGGCTGCACGACCGCGCCAAGGACAGCTG
CCAGTTCGTCTGCGCCGAAGATCCCGACGGCCGCACGGTCGAGACGCTGGAGGGCCAGCCCTTCCTGACCGTGAACGGCG
TGCAGACGCTGAGCTATACCCATATGAGCGTGGCGGGACAGGTCGACCCCCTGCGCGAGGCCGGCGTCGGCGCGTTGCGG
CTGTCGCCGCAGCCGGGCGACTTCGCGGCCGTGGCCCGGCTTTACGCGTGCCTGCTGGAAAGCGGGCTTTCCCCCCGCGA
CGCTTTGGCCGACTTGCGGCGCATCCAGCCCGGCGCCATCTTTGCCCAAGGGTTCCTCGAGGCGCGCCCCGGCGCCGCCC
CCTGCCCCTGA

Upstream 100 bases:

>100_bases
CCGCCGACCAGGGCGCCCCGATGCCCGAGGGACTGCTTGCGCGGCTGACCGAGGGCCAGGCCGCAACCACCGGCGCCTAT
GCCAAGACCTGGAGATGACC

Downstream 100 bases:

>100_bases
TCCATTTCTGACGGAGACGCGCGATGTCCACCTCGGAGCGCATGCGCAACTATCACGGGCCGGTGCTGCTGAGCCACGGC
TTCCGGGCCTTCTTCCTCAT

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MDLTVGPIAFFWSAEQVRAFYRTLADTPVQRVVIGEWVCSKRLPFWQHEIPAAVEVLLAAGKEVALSTLTLITLKRERRQ
TAELFASGLPVEIADLSALKHLPEGAPFWVGPTVNVYNEGTLEWLAARGARRICLPPELPLESVAQLARAGQQAGVAVEV
WGHGRAPLAISGRCYHARLHDRAKDSCQFVCAEDPDGRTVETLEGQPFLTVNGVQTLSYTHMSVAGQVDPLREAGVGALR
LSPQPGDFAAVARLYACLLESGLSPRDALADLRRIQPGAIFAQGFLEARPGAAPCP

Sequences:

>Translated_296_residues
MDLTVGPIAFFWSAEQVRAFYRTLADTPVQRVVIGEWVCSKRLPFWQHEIPAAVEVLLAAGKEVALSTLTLITLKRERRQ
TAELFASGLPVEIADLSALKHLPEGAPFWVGPTVNVYNEGTLEWLAARGARRICLPPELPLESVAQLARAGQQAGVAVEV
WGHGRAPLAISGRCYHARLHDRAKDSCQFVCAEDPDGRTVETLEGQPFLTVNGVQTLSYTHMSVAGQVDPLREAGVGALR
LSPQPGDFAAVARLYACLLESGLSPRDALADLRRIQPGAIFAQGFLEARPGAAPCP
>Mature_296_residues
MDLTVGPIAFFWSAEQVRAFYRTLADTPVQRVVIGEWVCSKRLPFWQHEIPAAVEVLLAAGKEVALSTLTLITLKRERRQ
TAELFASGLPVEIADLSALKHLPEGAPFWVGPTVNVYNEGTLEWLAARGARRICLPPELPLESVAQLARAGQQAGVAVEV
WGHGRAPLAISGRCYHARLHDRAKDSCQFVCAEDPDGRTVETLEGQPFLTVNGVQTLSYTHMSVAGQVDPLREAGVGALR
LSPQPGDFAAVARLYACLLESGLSPRDALADLRRIQPGAIFAQGFLEARPGAAPCP

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=257, Percent_Identity=32.295719844358, Blast_Score=137, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 32020; Mature: 32020

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTVGPIAFFWSAEQVRAFYRTLADTPVQRVVIGEWVCSKRLPFWQHEIPAAVEVLLAA
CCCCCCHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
GKEVALSTLTLITLKRERRQTAELFASGLPVEIADLSALKHLPEGAPFWVGPTVNVYNEG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCEEECCEEEECCCC
TLEWLAARGARRICLPPELPLESVAQLARAGQQAGVAVEVWGHGRAPLAISGRCYHARLH
HHHHHHHCCCCEEECCCCCCHHHHHHHHHCCHHCCEEEEECCCCCCCEEECCCEEEHHHH
DRAKDSCQFVCAEDPDGRTVETLEGQPFLTVNGVQTLSYTHMSVAGQVDPLREAGVGALR
HCCCCCEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEEHHHHCCCCCCHHHCCCCEEE
LSPQPGDFAAVARLYACLLESGLSPRDALADLRRIQPGAIFAQGFLEARPGAAPCP
ECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDLTVGPIAFFWSAEQVRAFYRTLADTPVQRVVIGEWVCSKRLPFWQHEIPAAVEVLLAA
CCCCCCHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
GKEVALSTLTLITLKRERRQTAELFASGLPVEIADLSALKHLPEGAPFWVGPTVNVYNEG
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCEEECCEEEECCCC
TLEWLAARGARRICLPPELPLESVAQLARAGQQAGVAVEVWGHGRAPLAISGRCYHARLH
HHHHHHHCCCCEEECCCCCCHHHHHHHHHCCHHCCEEEEECCCCCCCEEECCCEEEHHHH
DRAKDSCQFVCAEDPDGRTVETLEGQPFLTVNGVQTLSYTHMSVAGQVDPLREAGVGALR
HCCCCCEEEEECCCCCCCEEEEECCCCEEEECCCEEEEEEHHHHCCCCCCHHHCCCCEEE
LSPQPGDFAAVARLYACLLESGLSPRDALADLRRIQPGAIFAQGFLEARPGAAPCP
ECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]