| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386868
Identifier: 119386868
GI number: 119386868
Start: 1320373
End: 1321368
Strand: Direct
Name: 119386868
Synonym: Pden_4163
Alternate gene names: NA
Gene position: 1320373-1321368 (Clockwise)
Preceding gene: 119386867
Following gene: 119386870
Centisome position: 76.32
GC content: 61.55
Gene sequence:
>996_bases ATGCGCTTTCTGCAGGACGACCCGGCCGGGATTCGCATTGTCCTGGCCGCGGATGCGGAAAACCGTCGCCCCGATCTTCC CGCCGATCACCTGCCGATCACGCCCGATACGCTTCTGGAATGGCAGATGAACGGCAGCTATACCCATGCCATCCAGGCCC ATGCGCTGCACCATGCCGTCCGGCATTTCGACGCGCCGACGATCCTGATCGACAGCGATACCGTTTTCCACGCCCACCCC AAGCACCTGTTCGACCGGATAGGGCCGGGCAAGACCCTGATGCATGCCCGCGAAGGAATATTGCGGGACAGCCCGGAATG GCCGGAATGGGAAAGCCTGATCCGCAATACCGGCGGCGTATTGGCAGGCTGGCCGGTCGACCGGAATACGGTCATGCACA ATGCCGGCGTTCTGGGCCTGCACCCCAGCGACGCCGCGCTCATGGAGCGCGTAAAGGCCGCGATGCAGGAAATCCGCGCA CAAAGCTCGGTGTTCACGGCCGTGCAACTGGCCGCGTCGCTGGGTTTCGGCAATGAGACGGAACTGTCGGATTGCGACGA CCTGGTCGAGCATTATTGGAACGGGCCGCGGGCCTATTACCACTATCAGATCAAGCGCATGTTTCCGAAAATCCTGCAAG GCGGCGGGATAGAGGGAATGAACATGCCGCTTGCACCGCTGGAAAGAAACCCGCCCTGCCGGATGGGAAACCGCATTGCC GCGCGAATCAAGCGGATGCGGCGGGGCGGCGATGGCGAATATGCCTATGCCTATCTGGCCTATCTCAATGCGCTGTCGCT GCGCAGAAGCGATATGGACATGGCGAATGTGTGGGCGGTCACGGCATTGGACATGCTGTCATGGGGCGTATCGCGCCAAC ACCAGGAAATCACTACGGATTTCTCGCATTTCTCTCCGGCAGGCCTGGACGCGCAAGACTGGATGCAACCCACCTTGCGC CGGCGTTGGCATGATTACTGGGCGGCGCGGACATGA
Upstream 100 bases:
>100_bases TCAGAGCAGGGGGAGCGGGTCTTTGAAAATCCTTCTTTTCCAGATCTACGGAAATCAGCGCGCCTATCATCTTGAACTGA CCTACTGCGTCCTTTCCGCC
Downstream 100 bases:
>100_bases CCTGAAAAGGCGGGGCTAGACCTTTTCGCCATTCGCCCGGTCGAAGCGCGACTGGGCGGTATGGATCGCGTCGATATTCG CCATCGCCCATTCCGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MRFLQDDPAGIRIVLAADAENRRPDLPADHLPITPDTLLEWQMNGSYTHAIQAHALHHAVRHFDAPTILIDSDTVFHAHP KHLFDRIGPGKTLMHAREGILRDSPEWPEWESLIRNTGGVLAGWPVDRNTVMHNAGVLGLHPSDAALMERVKAAMQEIRA QSSVFTAVQLAASLGFGNETELSDCDDLVEHYWNGPRAYYHYQIKRMFPKILQGGGIEGMNMPLAPLERNPPCRMGNRIA ARIKRMRRGGDGEYAYAYLAYLNALSLRRSDMDMANVWAVTALDMLSWGVSRQHQEITTDFSHFSPAGLDAQDWMQPTLR RRWHDYWAART
Sequences:
>Translated_331_residues MRFLQDDPAGIRIVLAADAENRRPDLPADHLPITPDTLLEWQMNGSYTHAIQAHALHHAVRHFDAPTILIDSDTVFHAHP KHLFDRIGPGKTLMHAREGILRDSPEWPEWESLIRNTGGVLAGWPVDRNTVMHNAGVLGLHPSDAALMERVKAAMQEIRA QSSVFTAVQLAASLGFGNETELSDCDDLVEHYWNGPRAYYHYQIKRMFPKILQGGGIEGMNMPLAPLERNPPCRMGNRIA ARIKRMRRGGDGEYAYAYLAYLNALSLRRSDMDMANVWAVTALDMLSWGVSRQHQEITTDFSHFSPAGLDAQDWMQPTLR RRWHDYWAART >Mature_331_residues MRFLQDDPAGIRIVLAADAENRRPDLPADHLPITPDTLLEWQMNGSYTHAIQAHALHHAVRHFDAPTILIDSDTVFHAHP KHLFDRIGPGKTLMHAREGILRDSPEWPEWESLIRNTGGVLAGWPVDRNTVMHNAGVLGLHPSDAALMERVKAAMQEIRA QSSVFTAVQLAASLGFGNETELSDCDDLVEHYWNGPRAYYHYQIKRMFPKILQGGGIEGMNMPLAPLERNPPCRMGNRIA ARIKRMRRGGDGEYAYAYLAYLNALSLRRSDMDMANVWAVTALDMLSWGVSRQHQEITTDFSHFSPAGLDAQDWMQPTLR RRWHDYWAART
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37504; Mature: 37504
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLQDDPAGIRIVLAADAENRRPDLPADHLPITPDTLLEWQMNGSYTHAIQAHALHHAV CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHH RHFDAPTILIDSDTVFHAHPKHLFDRIGPGKTLMHAREGILRDSPEWPEWESLIRNTGGV HHCCCCEEEECCCCEEECCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE LAGWPVDRNTVMHNAGVLGLHPSDAALMERVKAAMQEIRAQSSVFTAVQLAASLGFGNET EECCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ELSDCDDLVEHYWNGPRAYYHYQIKRMFPKILQGGGIEGMNMPLAPLERNPPCRMGNRIA CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH ARIKRMRRGGDGEYAYAYLAYLNALSLRRSDMDMANVWAVTALDMLSWGVSRQHQEITTD HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH FSHFSPAGLDAQDWMQPTLRRRWHDYWAART HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFLQDDPAGIRIVLAADAENRRPDLPADHLPITPDTLLEWQMNGSYTHAIQAHALHHAV CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHEEEEECCCCHHHHHHHHHHHHH RHFDAPTILIDSDTVFHAHPKHLFDRIGPGKTLMHAREGILRDSPEWPEWESLIRNTGGV HHCCCCEEEECCCCEEECCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCE LAGWPVDRNTVMHNAGVLGLHPSDAALMERVKAAMQEIRAQSSVFTAVQLAASLGFGNET EECCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ELSDCDDLVEHYWNGPRAYYHYQIKRMFPKILQGGGIEGMNMPLAPLERNPPCRMGNRIA CCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH ARIKRMRRGGDGEYAYAYLAYLNALSLRRSDMDMANVWAVTALDMLSWGVSRQHQEITTD HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH FSHFSPAGLDAQDWMQPTLRRRWHDYWAART HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA