| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386864
Identifier: 119386864
GI number: 119386864
Start: 1315907
End: 1316818
Strand: Direct
Name: 119386864
Synonym: Pden_4159
Alternate gene names: NA
Gene position: 1315907-1316818 (Clockwise)
Preceding gene: 119386863
Following gene: 119386865
Centisome position: 76.06
GC content: 70.83
Gene sequence:
>912_bases ATGCACCTGAACCGCCGCCATTTCCTTGCCGCTTCCGCCGCCGCCCTGGTCCTGCCCGGCAGGCGGGTCTGGGCCGCCAG CACCCTGACCATGGGAACGGTGCGCGTCGACAGCCTGTCGGACGGGCATCTGGAACTGCCGCTGGACTTTACCTTCGCCG GCCTGCCCGAGGCCGAGATCGCGGCCCTGCTCGACCGGCACGGGCTGGCGGCGGACGGGCTGACGCCGCCCTGCAACCTG ACGCTGCTGCGCGACGGCACGAACACCGTGCTGTTCGACCTGGGCGCGGGGCCGGATTTCATGCCCACTGCCGGCAAGCT GGCCGAGGCGCTGGAGGCGCTGGACCTGACGCCCGGGGATGTGACGCATGTGCTGATCACCCACGGCCATCCCGATCACC TCTGGGGCCTGCTGGACGAATTCGACGAGCCGGTCTTCGCCGATGCCGAATACATGATCGGCCAGGCCGAGTTCAACTAT TGGATGGACCCGGCCACGGTCGAAAGCATCGGCGAGGACCGCGCCAGCTTCGCCATCGGCGCCTCGCGGCGGCTGGAGGT CGTCGCGGACAGCATCCGCAAGCTGGCCGACGGCGAAGAAGCCCTGCCCGGCATCACCGCGCGGCTGACGCCCGGCCATA CCCCCGGCCACCTGGCCTATGAGATCGCCACGCCCGAGGGCACGCTGATGGTCGTGGGCGACGCGATCGGCAACCACCAC GTCGCCTTCGACCGCCCCGACTGGCCCGCGCCCTCGGACCAGGATCCCGCGCTGGCCGCCGCCACCCGCGTCGCGCTGCT GGAGCGGCTGGCGGACGGGGCCATGCCCTTCATCGGCTACCACCTGCCGCAGGGCGGGCTGGGACGGGTGGAAAGAACCG AAACCGGCTATCGCTTCGCGGGGGACATCTGA
Upstream 100 bases:
>100_bases GCGAGGATGCCGCGCTGCGCCGGCGCACCTATGAGGAAAGCCTCGGCTGGTATGCGGGCATCACCGCCGACATCTTCGGC TGAACCGAAAGGAGAACCCC
Downstream 100 bases:
>100_bases TGCGCCGGCTGATCCTTTGCCTGATCGCCCTGCCCGCCCTGGCATCCGAGGACATTCCCGACCAATATCCGCAATCGGTG CTGTATTCGAAGCCGGTCGA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Twin-Arginine Translocation Pathway Signal; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase; Metal Dependent Hydrolase; Hydrolase; Methyl Parathion Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase; Beta-Lactamase Superfamily Hydrolase; Metallo-Hydrolase Protein; Metallo-Beta-Lactamase Superfamily; Metal-Dependent Hydrolase; Glyoxalase II; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metallo-Beta-Lactamase Protein; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Aldehyde Dehydrogenase; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MHLNRRHFLAASAAALVLPGRRVWAASTLTMGTVRVDSLSDGHLELPLDFTFAGLPEAEIAALLDRHGLAADGLTPPCNL TLLRDGTNTVLFDLGAGPDFMPTAGKLAEALEALDLTPGDVTHVLITHGHPDHLWGLLDEFDEPVFADAEYMIGQAEFNY WMDPATVESIGEDRASFAIGASRRLEVVADSIRKLADGEEALPGITARLTPGHTPGHLAYEIATPEGTLMVVGDAIGNHH VAFDRPDWPAPSDQDPALAAATRVALLERLADGAMPFIGYHLPQGGLGRVERTETGYRFAGDI
Sequences:
>Translated_303_residues MHLNRRHFLAASAAALVLPGRRVWAASTLTMGTVRVDSLSDGHLELPLDFTFAGLPEAEIAALLDRHGLAADGLTPPCNL TLLRDGTNTVLFDLGAGPDFMPTAGKLAEALEALDLTPGDVTHVLITHGHPDHLWGLLDEFDEPVFADAEYMIGQAEFNY WMDPATVESIGEDRASFAIGASRRLEVVADSIRKLADGEEALPGITARLTPGHTPGHLAYEIATPEGTLMVVGDAIGNHH VAFDRPDWPAPSDQDPALAAATRVALLERLADGAMPFIGYHLPQGGLGRVERTETGYRFAGDI >Mature_303_residues MHLNRRHFLAASAAALVLPGRRVWAASTLTMGTVRVDSLSDGHLELPLDFTFAGLPEAEIAALLDRHGLAADGLTPPCNL TLLRDGTNTVLFDLGAGPDFMPTAGKLAEALEALDLTPGDVTHVLITHGHPDHLWGLLDEFDEPVFADAEYMIGQAEFNY WMDPATVESIGEDRASFAIGASRRLEVVADSIRKLADGEEALPGITARLTPGHTPGHLAYEIATPEGTLMVVGDAIGNHH VAFDRPDWPAPSDQDPALAAATRVALLERLADGAMPFIGYHLPQGGLGRVERTETGYRFAGDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32390; Mature: 32390
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLNRRHFLAASAAALVLPGRRVWAASTLTMGTVRVDSLSDGHLELPLDFTFAGLPEAEI CCCCCHHHHHHCCEEEEECCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCHHHH AALLDRHGLAADGLTPPCNLTLLRDGTNTVLFDLGAGPDFMPTAGKLAEALEALDLTPGD HHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC VTHVLITHGHPDHLWGLLDEFDEPVFADAEYMIGQAEFNYWMDPATVESIGEDRASFAIG EEEEEEECCCHHHHHHHHHHHCCCEECCHHHEEEEECCCEECCCHHHHHHCCCHHHEEEC ASRRLEVVADSIRKLADGEEALPGITARLTPGHTPGHLAYEIATPEGTLMVVGDAIGNHH CCHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCE VAFDRPDWPAPSDQDPALAAATRVALLERLADGAMPFIGYHLPQGGLGRVERTETGYRFA EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCEECCCCEEEE GDI CCC >Mature Secondary Structure MHLNRRHFLAASAAALVLPGRRVWAASTLTMGTVRVDSLSDGHLELPLDFTFAGLPEAEI CCCCCHHHHHHCCEEEEECCCEEEEEEEEEEEEEEEECCCCCCEEEEEEEEECCCCHHHH AALLDRHGLAADGLTPPCNLTLLRDGTNTVLFDLGAGPDFMPTAGKLAEALEALDLTPGD HHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC VTHVLITHGHPDHLWGLLDEFDEPVFADAEYMIGQAEFNYWMDPATVESIGEDRASFAIG EEEEEEECCCHHHHHHHHHHHCCCEECCHHHEEEEECCCEECCCHHHHHHCCCHHHEEEC ASRRLEVVADSIRKLADGEEALPGITARLTPGHTPGHLAYEIATPEGTLMVVGDAIGNHH CCHHHHHHHHHHHHHCCCCHHCCCCEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCE VAFDRPDWPAPSDQDPALAAATRVALLERLADGAMPFIGYHLPQGGLGRVERTETGYRFA EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCEECCCCEEEE GDI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA