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The map label for this gene is ybjQ [C]

Identifier: 119386672

GI number: 119386672

Start: 1103932

End: 1104243

Strand: Direct

Name: ybjQ [C]

Synonym: Pden_3965

Alternate gene names: 119386672

Gene position: 1103932-1104243 (Clockwise)

Preceding gene: 119386671

Following gene: 119386673

Centisome position: 63.81

GC content: 63.46

Gene sequence:

>312_bases
ATGATCGTCACCACCACCCCCGGCATCGAGGGTCGCCGCATCAGCGCCTATCACGGCGTGGTGACGGGCGAGACCATCAT
CGGGGCCAACATCTTTCGCGATATCTTCGCCGGGATTCGCGACATCGTGGGCGGCCGTGCTGGGGCTTACGAATCCGCGC
TGGCCTCGGCCCGCGAAACCGCCTTGTCCGAGATGCAGGACCGCGCCCGCCAATTGGGCGGCAATGCCGTGGTCGGCGTC
GATCTGGATTATGAAGTCATCAACAACATGCTGATGGTGTCCGCCTCGGGCACCGCCGTAAGTGTCGAATAG

Upstream 100 bases:

>100_bases
TTGTGAACGGCTTCTGCCGCGAGGTCCTGCAGGCCCTGCCGATGGAATTCGCCATGGAGGCGCAGTCGCTGGTCGCGATC
AGCCTGGAGGGGTCGGTCGG

Downstream 100 bases:

>100_bases
GAACGAACCATGCTGGAAATCAAGAATCTGCACGTCAAGCTTGAGGATGAGGACAAGCAGATCCTCAAAGGCGTCGATCT
GACCGTCCCCGCTGGCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MIVTTTPGIEGRRISAYHGVVTGETIIGANIFRDIFAGIRDIVGGRAGAYESALASARETALSEMQDRARQLGGNAVVGV
DLDYEVINNMLMVSASGTAVSVE

Sequences:

>Translated_103_residues
MIVTTTPGIEGRRISAYHGVVTGETIIGANIFRDIFAGIRDIVGGRAGAYESALASARETALSEMQDRARQLGGNAVVGV
DLDYEVINNMLMVSASGTAVSVE
>Mature_103_residues
MIVTTTPGIEGRRISAYHGVVTGETIIGANIFRDIFAGIRDIVGGRAGAYESALASARETALSEMQDRARQLGGNAVVGV
DLDYEVINNMLMVSASGTAVSVE

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family

Homologues:

Organism=Escherichia coli, GI1787091, Length=104, Percent_Identity=62.5, Blast_Score=127, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3965_PARDP (A1B937)

Other databases:

- EMBL:   CP000490
- RefSeq:   YP_917727.1
- ProteinModelPortal:   A1B937
- SMR:   A1B937
- STRING:   A1B937
- GeneID:   4582516
- GenomeReviews:   CP000490_GR
- KEGG:   pde:Pden_3965
- eggNOG:   COG0393
- HOGENOM:   HBG339160
- OMA:   DFEISMP
- PhylomeDB:   A1B937
- ProtClustDB:   CLSK841247
- HAMAP:   MF_00338
- InterPro:   IPR002765
- Gene3D:   G3DSA:3.30.110.70

Pfam domain/function: PF01906 DUF74

EC number: NA

Molecular weight: Translated: 10773; Mature: 10773

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVTTTPGIEGRRISAYHGVVTGETIIGANIFRDIFAGIRDIVGGRAGAYESALASARET
CEEECCCCCCCCEEEHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALSEMQDRARQLGGNAVVGVDLDYEVINNMLMVSASGTAVSVE
HHHHHHHHHHHCCCCEEEEECCCHHHHCCEEEEECCCCEEEEC
>Mature Secondary Structure
MIVTTTPGIEGRRISAYHGVVTGETIIGANIFRDIFAGIRDIVGGRAGAYESALASARET
CEEECCCCCCCCEEEHCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALSEMQDRARQLGGNAVVGVDLDYEVINNMLMVSASGTAVSVE
HHHHHHHHHHHCCCCEEEEECCCHHHHCCEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA