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The map label for this gene is 119386666

Identifier: 119386666

GI number: 119386666

Start: 1096744

End: 1097157

Strand: Direct

Name: 119386666

Synonym: Pden_3959

Alternate gene names: NA

Gene position: 1096744-1097157 (Clockwise)

Preceding gene: 119386665

Following gene: 119386667

Centisome position: 63.39

GC content: 64.01

Gene sequence:

>414_bases
ATGAAGTTCGAAAGGATTTCGGACGGGACGCCGGTCGCGGCCGTCGACAGGAAGGCTCTGCAAGGTGCCGTCGCCTATTC
CGCGGGTCGCCTCGCCGAGGAATCGGCGGCGCGGGAATATCGCCGGCGCGGTTACGAGGTCATGGCCGAACGCTGGCGCG
GGCGCGGCGGCGAAATCGACCTGATCCTTTGCAGGGATGACGAATACACCTTTGTCGAGGTCAAGAAATCGCGCTTTCAC
GACCGGGCGGCGGAGCGGATCGGTGCGCGGCAGATCGCGCGAATCTGCAATGCTGCGCTGGAATATTGCGGGCGCCTGCC
CGCCGGGCTGCTGACCGCAATGCGCTTCGACGCAGCCTTGGTCGATCAGTTCGGGCGGGTCGAGATCATCGAGAATGCAT
TTGGCGTGAACTAG

Upstream 100 bases:

>100_bases
GATCGCCGGTGAAGGAAGCAGCCGCAGAAGTCGCGGCTCGGTTTGGCCGGCCACGACGCGAAATCTATGCGCTGGCTCTT
GAGATGAAGAAGGAACGGGA

Downstream 100 bases:

>100_bases
GCCCTGGGCCAGCTCGCAGGGCGCATGAGCGTGCGGCCCGCGCTGCCAGATCTTGCTCGGCGCCGTCTTGGAAGCCGGTG
CCGGACAGTGGGCAGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKFERISDGTPVAAVDRKALQGAVAYSAGRLAEESAAREYRRRGYEVMAERWRGRGGEIDLILCRDDEYTFVEVKKSRFH
DRAAERIGARQIARICNAALEYCGRLPAGLLTAMRFDAALVDQFGRVEIIENAFGVN

Sequences:

>Translated_137_residues
MKFERISDGTPVAAVDRKALQGAVAYSAGRLAEESAAREYRRRGYEVMAERWRGRGGEIDLILCRDDEYTFVEVKKSRFH
DRAAERIGARQIARICNAALEYCGRLPAGLLTAMRFDAALVDQFGRVEIIENAFGVN
>Mature_137_residues
MKFERISDGTPVAAVDRKALQGAVAYSAGRLAEESAAREYRRRGYEVMAERWRGRGGEIDLILCRDDEYTFVEVKKSRFH
DRAAERIGARQIARICNAALEYCGRLPAGLLTAMRFDAALVDQFGRVEIIENAFGVN

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 15389; Mature: 15389

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFERISDGTPVAAVDRKALQGAVAYSAGRLAEESAAREYRRRGYEVMAERWRGRGGEID
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEE
LILCRDDEYTFVEVKKSRFHDRAAERIGARQIARICNAALEYCGRLPAGLLTAMRFDAAL
EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VDQFGRVEIIENAFGVN
HHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MKFERISDGTPVAAVDRKALQGAVAYSAGRLAEESAAREYRRRGYEVMAERWRGRGGEID
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEE
LILCRDDEYTFVEVKKSRFHDRAAERIGARQIARICNAALEYCGRLPAGLLTAMRFDAAL
EEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VDQFGRVEIIENAFGVN
HHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA