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The map label for this gene is rsmI [H]

Identifier: 119386665

GI number: 119386665

Start: 1095839

End: 1096747

Strand: Direct

Name: rsmI [H]

Synonym: Pden_3958

Alternate gene names: 119386665

Gene position: 1095839-1096747 (Clockwise)

Preceding gene: 119386661

Following gene: 119386666

Centisome position: 63.34

GC content: 67.44

Gene sequence:

>909_bases
ATGGAGGATGGCGCCAGCACAACCGGGACGGGCGCGCGGACGCTTTCCCTGACCGTATCGGCATCCGCGCCCGAACCGGG
GCTCTATCTGGTGGCGACCCCCATCGGCGCGGCGCGGGACATCACCCTGCGGGCGCTCGACGTGCTGAACACGGCCGATA
TGCTGGCCGCCGAGGATACCCGCAACCTGCGGCATCTCATGGATATTCACGGCATCCCGGTCCGGGGCCGGCGCATCGTC
GCCTATCACGACCACAATGCCGACCGGCAGCGCCCGGCGATCCTTGCCGCCCTGGGCGAGGGACGGTCGGTCGCCTATGC
CTCGGATGCAGGCACGCCGCTGGTCGCCGATCCCGGCTACCGGCTTGCGCGGGATGCCGCCGAAGCGGGCTTTGCCGTCC
GGGCGCTGCCCGGGCCCTCGGCGGCGCTGGCGGCGCTGTCCGTCTCGGGCTTGCCCAGCGACAGGTTCCTGTTCGTGGGC
TTCCCGCCGGCCGCCGCCGGTGCGCGGCGGACATGGATCGAAAGCTGGCGCAAGGTCGATGCCACGGTGATCGCCTTCGA
AAGCCCCAGGCGCGTTAAGCAATTGTTGGAGAATCTGTGCGAACTTGAGGCGAATCGGCTTACGGTGATCTGCAGGGAAC
TGACGAAGAAATTCGAAGAGGTGCTGCGTGGCACGGCGACGGAACTGCTGGAACAAATCCCCGGAGAGGGACTGCGCGGC
GAGATCGTGGTGCTGTTCGGCCGCCCCGAACCGGCTGCTGCGGATGAAGGCAGCCTGCGCGAAGCGCTGAGCGAACTGCT
GGACGGATCGCCGGTGAAGGAAGCAGCCGCAGAAGTCGCGGCTCGGTTTGGCCGGCCACGACGCGAAATCTATGCGCTGG
CTCTTGAGATGAAGAAGGAACGGGAATGA

Upstream 100 bases:

>100_bases
TGATTCCCTGTTTGGATCGAGGCTGGGGGTTTGATGGGGGCAGGTTATTGGCATATTCGGGACATGGCAACTTGCCCCGG
CAGCATGAAAGGAACCCGCG

Downstream 100 bases:

>100_bases
AGTTCGAAAGGATTTCGGACGGGACGCCGGTCGCGGCCGTCGACAGGAAGGCTCTGCAAGGTGCCGTCGCCTATTCCGCG
GGTCGCCTCGCCGAGGAATC

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEDGASTTGTGARTLSLTVSASAPEPGLYLVATPIGAARDITLRALDVLNTADMLAAEDTRNLRHLMDIHGIPVRGRRIV
AYHDHNADRQRPAILAALGEGRSVAYASDAGTPLVADPGYRLARDAAEAGFAVRALPGPSAALAALSVSGLPSDRFLFVG
FPPAAAGARRTWIESWRKVDATVIAFESPRRVKQLLENLCELEANRLTVICRELTKKFEEVLRGTATELLEQIPGEGLRG
EIVVLFGRPEPAAADEGSLREALSELLDGSPVKEAAAEVAARFGRPRREIYALALEMKKERE

Sequences:

>Translated_302_residues
MEDGASTTGTGARTLSLTVSASAPEPGLYLVATPIGAARDITLRALDVLNTADMLAAEDTRNLRHLMDIHGIPVRGRRIV
AYHDHNADRQRPAILAALGEGRSVAYASDAGTPLVADPGYRLARDAAEAGFAVRALPGPSAALAALSVSGLPSDRFLFVG
FPPAAAGARRTWIESWRKVDATVIAFESPRRVKQLLENLCELEANRLTVICRELTKKFEEVLRGTATELLEQIPGEGLRG
EIVVLFGRPEPAAADEGSLREALSELLDGSPVKEAAAEVAARFGRPRREIYALALEMKKERE
>Mature_302_residues
MEDGASTTGTGARTLSLTVSASAPEPGLYLVATPIGAARDITLRALDVLNTADMLAAEDTRNLRHLMDIHGIPVRGRRIV
AYHDHNADRQRPAILAALGEGRSVAYASDAGTPLVADPGYRLARDAAEAGFAVRALPGPSAALAALSVSGLPSDRFLFVG
FPPAAAGARRTWIESWRKVDATVIAFESPRRVKQLLENLCELEANRLTVICRELTKKFEEVLRGTATELLEQIPGEGLRG
EIVVLFGRPEPAAADEGSLREALSELLDGSPVKEAAAEVAARFGRPRREIYALALEMKKERE

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=229, Percent_Identity=44.1048034934498, Blast_Score=170, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32409; Mature: 32409

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDGASTTGTGARTLSLTVSASAPEPGLYLVATPIGAARDITLRALDVLNTADMLAAEDT
CCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
RNLRHLMDIHGIPVRGRRIVAYHDHNADRQRPAILAALGEGRSVAYASDAGTPLVADPGY
HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCH
RLARDAAEAGFAVRALPGPSAALAALSVSGLPSDRFLFVGFPPAAAGARRTWIESWRKVD
HHHHHHHHCCEEEEECCCCHHHHHHHEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC
ATVIAFESPRRVKQLLENLCELEANRLTVICRELTKKFEEVLRGTATELLEQIPGEGLRG
EEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EIVVLFGRPEPAAADEGSLREALSELLDGSPVKEAAAEVAARFGRPRREIYALALEMKKE
CEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
RE
CC
>Mature Secondary Structure
MEDGASTTGTGARTLSLTVSASAPEPGLYLVATPIGAARDITLRALDVLNTADMLAAEDT
CCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
RNLRHLMDIHGIPVRGRRIVAYHDHNADRQRPAILAALGEGRSVAYASDAGTPLVADPGY
HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCEEECCCH
RLARDAAEAGFAVRALPGPSAALAALSVSGLPSDRFLFVGFPPAAAGARRTWIESWRKVD
HHHHHHHHCCEEEEECCCCHHHHHHHEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC
ATVIAFESPRRVKQLLENLCELEANRLTVICRELTKKFEEVLRGTATELLEQIPGEGLRG
EEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EIVVLFGRPEPAAADEGSLREALSELLDGSPVKEAAAEVAARFGRPRREIYALALEMKKE
CEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
RE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]