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The map label for this gene is ypfH [C]

Identifier: 119386653

GI number: 119386653

Start: 1082878

End: 1083537

Strand: Direct

Name: ypfH [C]

Synonym: Pden_3946

Alternate gene names: 119386653

Gene position: 1082878-1083537 (Clockwise)

Preceding gene: 119386652

Following gene: 119386655

Centisome position: 62.59

GC content: 66.97

Gene sequence:

>660_bases
ATGCTGCGCGAGTTGAAATCCGAACGCAAGGGGCCGCGCCAGGCCGATTCCGTGGTGGTCTTTCTGCACGGCTACGGCGC
CGACGGGGCCGACCTGCTGGGACTGGCCGATCCGCTGGCGCCGCATCTGCCCGGCACCGCCTTCTATGCCCCGAACGCAC
CCGAGCCCTGCGTGAACAATCCGATGGGCTATCAGTGGTTTCCCATCCCCTGGATGGACGGCTCGTCCGAGACGCAGGCC
AAGGAATCGGCGGCGCAATCCTTCAAGGACATCAATGCCTTCCTGGACAATGTTCTGGCGAATGAAGGGCTGGCCGCGGA
CAGGCTGGCGCTGGTCGGCTTTTCGCAGGGCACGATGATGGCGCTGGCCGTCGCTCCGCAGCGCCAAGAAGAGATCGCCG
GGGTGGTGGGGTTCTCGGGCCGCTTGCTGGACCCCGAGAACGTGGGCCAGGCGCGGGTCAAGCCGCCGGTCCTGCTGATC
CATGGCGACCAGGACCCGGTCGTGCCCTTCGAAAGCATGGGGATCGCCGGCGAGGCGCTGCAGGCGGCCGGCTTCACCGT
CTACGGCCATGTGATGAAGAATACCGGCCACGGCATCTCGCCCGACGGGCTGTCCGTGGCCCTGGCCTTCCTGAAGGAGC
GGTTTGCCGCCGGGTCGTAA

Upstream 100 bases:

>100_bases
GCCGAGCCGTGGCGGCCCTGGCGGGCGGTTGCGGCCCGGGCGCTCTGGGCCTATTACCGGGCCGCAAAAGGGCGCGAGGG
CGTCCGCTGAGGGGGACGAG

Downstream 100 bases:

>100_bases
GGTCTTTGGGCGATTTCGCACTTGCGAAAGGAAATGCAGTCCCTACCTTCTTAAAGAGGAAGAGACGAGGAGAGTGCACA
TGACCCTGATCTGGATGACC

Product: phospholipase/carboxylesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLRELKSERKGPRQADSVVVFLHGYGADGADLLGLADPLAPHLPGTAFYAPNAPEPCVNNPMGYQWFPIPWMDGSSETQA
KESAAQSFKDINAFLDNVLANEGLAADRLALVGFSQGTMMALAVAPQRQEEIAGVVGFSGRLLDPENVGQARVKPPVLLI
HGDQDPVVPFESMGIAGEALQAAGFTVYGHVMKNTGHGISPDGLSVALAFLKERFAAGS

Sequences:

>Translated_219_residues
MLRELKSERKGPRQADSVVVFLHGYGADGADLLGLADPLAPHLPGTAFYAPNAPEPCVNNPMGYQWFPIPWMDGSSETQA
KESAAQSFKDINAFLDNVLANEGLAADRLALVGFSQGTMMALAVAPQRQEEIAGVVGFSGRLLDPENVGQARVKPPVLLI
HGDQDPVVPFESMGIAGEALQAAGFTVYGHVMKNTGHGISPDGLSVALAFLKERFAAGS
>Mature_219_residues
MLRELKSERKGPRQADSVVVFLHGYGADGADLLGLADPLAPHLPGTAFYAPNAPEPCVNNPMGYQWFPIPWMDGSSETQA
KESAAQSFKDINAFLDNVLANEGLAADRLALVGFSQGTMMALAVAPQRQEEIAGVVGFSGRLLDPENVGQARVKPPVLLI
HGDQDPVVPFESMGIAGEALQAAGFTVYGHVMKNTGHGISPDGLSVALAFLKERFAAGS

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase 2 family [H]

Homologues:

Organism=Homo sapiens, GI5453722, Length=180, Percent_Identity=32.2222222222222, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI87082111, Length=201, Percent_Identity=26.865671641791, Blast_Score=70, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6323147, Length=221, Percent_Identity=30.316742081448, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003140 [H]

Pfam domain/function: PF02230 Abhydrolase_2 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 23127; Mature: 23127

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRELKSERKGPRQADSVVVFLHGYGADGADLLGLADPLAPHLPGTAFYAPNAPEPCVNN
CCCHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCEEECCCCCCCCCCC
PMGYQWFPIPWMDGSSETQAKESAAQSFKDINAFLDNVLANEGLAADRLALVGFSQGTMM
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEE
ALAVAPQRQEEIAGVVGFSGRLLDPENVGQARVKPPVLLIHGDQDPVVPFESMGIAGEAL
EEEECCCHHHHHHHEECCCCCEECHHCCCCCCCCCCEEEEECCCCCCCCHHHCCCCHHHH
QAAGFTVYGHVMKNTGHGISPDGLSVALAFLKERFAAGS
HHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRELKSERKGPRQADSVVVFLHGYGADGADLLGLADPLAPHLPGTAFYAPNAPEPCVNN
CCCHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCEEECCCCCCCCCCC
PMGYQWFPIPWMDGSSETQAKESAAQSFKDINAFLDNVLANEGLAADRLALVGFSQGTMM
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEE
ALAVAPQRQEEIAGVVGFSGRLLDPENVGQARVKPPVLLIHGDQDPVVPFESMGIAGEAL
EEEECCCHHHHHHHEECCCCCEECHHCCCCCCCCCCEEEEECCCCCCCCHHHCCCCHHHH
QAAGFTVYGHVMKNTGHGISPDGLSVALAFLKERFAAGS
HHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]