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The map label for this gene is insK [C]

Identifier: 119386553

GI number: 119386553

Start: 980135

End: 981040

Strand: Direct

Name: insK [C]

Synonym: Pden_3846

Alternate gene names: 119386553

Gene position: 980135-981040 (Clockwise)

Preceding gene: 119386552

Following gene: 119386555

Centisome position: 56.65

GC content: 62.25

Gene sequence:

>906_bases
ATGGTGGGTTTCATCGACGCGCACCGGGATGCGCACGGGGTCGAGCCGATCTGCGACGTGCTGCCGATCGCCCCGTCCAC
CTATTATGATCACCTTGCGAAGCGGGCCGATCCGTCTCGGCTGTCGGATCGGGCACGTCGGGACGAAGCGCTGCGCCCCG
AGATCCTGCGCGTGTTCGAAGAGAACTGGCGGGTCTATGGTGTCCGGAAGGTCTGGCGACAGCTTGGCCGTGAGGGCTTC
GATGTCGCGCGATGCACGGTGGCACGGCTGATGAAGAGCATGGGTATTCAGGGCATTATCCGCGGCAAGCCGCACAGGAC
GACGATCCCGGACAAGAAAGCTCCCTGTCCGCTGGACAAGGTGAACCGCCAGTTCCGCGTTCCGGCCCCGAACATGCTGT
GGGTGTCGGATTTCACCTATGTCGCCACCTGGAAGGGTTTCGTCTATGTCGCCTTTGTCATCGATGCCTATGCTCGCAAG
ATCGTTGGCTGGCGCGTCAGCAGTTCGGCGCATGCGGGGTTCGTTCTCGATGCCCTAGAGCAGGCGGTGCATGATCGCCG
CCCGGGAAAGGGCATGGGGCTGGTTCACCACAGCGACAGGGGCTCGCAATACCTGTCTATTCGCTACACTGAGCGCTTGG
CGGAGGCCGGTATCGAACCCTCGGTGGGCAGCGTCGGCGACAGTTACGACAACGCCTTGGCCGAGACGATCAATGGCCTG
TTCAAGGCGGAGGTCATCCACCGCCGTGGCCCATGGCGCAGCTTGGAAGCCGTGGAATACGCGACGCTCGAATGGGTGGA
CTGGTTCAACAACCGCCGTCTTCTCGAGCCCATAGGGAACATCCCGCCCGCAGAAGCCGAGGCCAACTTCTATGCAGCTC
TGGAAACTGAAGCCATGGCTGCGTAA

Upstream 100 bases:

>100_bases
CGCTGGAACGCGAGAACCGCGAGTTGCGCCAGGCGAACGAGATCCTTCGCAAGGCGTCAGCATATTTTGCGATGGCGGAG
CTCGACCGCCGGTCGAAGTG

Downstream 100 bases:

>100_bases
CTAACGTCAATCAGCCTCCGGAAAACCCGGCGCGGTTCACAGGGGGCAAGAACAAAAAGGGGTCAATATTTAGGATTCTC
AGCCGACAGACGCCGGAAAC

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MVGFIDAHRDAHGVEPICDVLPIAPSTYYDHLAKRADPSRLSDRARRDEALRPEILRVFEENWRVYGVRKVWRQLGREGF
DVARCTVARLMKSMGIQGIIRGKPHRTTIPDKKAPCPLDKVNRQFRVPAPNMLWVSDFTYVATWKGFVYVAFVIDAYARK
IVGWRVSSSAHAGFVLDALEQAVHDRRPGKGMGLVHHSDRGSQYLSIRYTERLAEAGIEPSVGSVGDSYDNALAETINGL
FKAEVIHRRGPWRSLEAVEYATLEWVDWFNNRRLLEPIGNIPPAEAEANFYAALETEAMAA

Sequences:

>Translated_301_residues
MVGFIDAHRDAHGVEPICDVLPIAPSTYYDHLAKRADPSRLSDRARRDEALRPEILRVFEENWRVYGVRKVWRQLGREGF
DVARCTVARLMKSMGIQGIIRGKPHRTTIPDKKAPCPLDKVNRQFRVPAPNMLWVSDFTYVATWKGFVYVAFVIDAYARK
IVGWRVSSSAHAGFVLDALEQAVHDRRPGKGMGLVHHSDRGSQYLSIRYTERLAEAGIEPSVGSVGDSYDNALAETINGL
FKAEVIHRRGPWRSLEAVEYATLEWVDWFNNRRLLEPIGNIPPAEAEANFYAALETEAMAA
>Mature_301_residues
MVGFIDAHRDAHGVEPICDVLPIAPSTYYDHLAKRADPSRLSDRARRDEALRPEILRVFEENWRVYGVRKVWRQLGREGF
DVARCTVARLMKSMGIQGIIRGKPHRTTIPDKKAPCPLDKVNRQFRVPAPNMLWVSDFTYVATWKGFVYVAFVIDAYARK
IVGWRVSSSAHAGFVLDALEQAVHDRRPGKGMGLVHHSDRGSQYLSIRYTERLAEAGIEPSVGSVGDSYDNALAETINGL
FKAEVIHRRGPWRSLEAVEYATLEWVDWFNNRRLLEPIGNIPPAEAEANFYAALETEAMAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=246, Percent_Identity=54.8780487804878, Blast_Score=266, Evalue=2e-71,
Organism=Escherichia coli, GI1789981, Length=287, Percent_Identity=27.1777003484321, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1788405, Length=244, Percent_Identity=28.2786885245902, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787263, Length=244, Percent_Identity=28.2786885245902, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786753, Length=244, Percent_Identity=28.2786885245902, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786570, Length=244, Percent_Identity=28.2786885245902, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786490, Length=244, Percent_Identity=28.2786885245902, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 34017; Mature: 34017

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGFIDAHRDAHGVEPICDVLPIAPSTYYDHLAKRADPSRLSDRARRDEALRPEILRVFE
CCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHH
ENWRVYGVRKVWRQLGREGFDVARCTVARLMKSMGIQGIIRGKPHRTTIPDKKAPCPLDK
HCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHH
VNRQFRVPAPNMLWVSDFTYVATWKGFVYVAFVIDAYARKIVGWRVSSSAHAGFVLDALE
CCCEEECCCCCEEEEECCHHEEHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHH
QAVHDRRPGKGMGLVHHSDRGSQYLSIRYTERLAEAGIEPSVGSVGDSYDNALAETINGL
HHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
FKAEVIHRRGPWRSLEAVEYATLEWVDWFNNRRLLEPIGNIPPAEAEANFYAALETEAMA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECHHHHC
A
C
>Mature Secondary Structure
MVGFIDAHRDAHGVEPICDVLPIAPSTYYDHLAKRADPSRLSDRARRDEALRPEILRVFE
CCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHH
ENWRVYGVRKVWRQLGREGFDVARCTVARLMKSMGIQGIIRGKPHRTTIPDKKAPCPLDK
HCCCEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCHHH
VNRQFRVPAPNMLWVSDFTYVATWKGFVYVAFVIDAYARKIVGWRVSSSAHAGFVLDALE
CCCEEECCCCCEEEEECCHHEEHHHHHHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHH
QAVHDRRPGKGMGLVHHSDRGSQYLSIRYTERLAEAGIEPSVGSVGDSYDNALAETINGL
HHHHHCCCCCCCCEEEECCCCCEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
FKAEVIHRRGPWRSLEAVEYATLEWVDWFNNRRLLEPIGNIPPAEAEANFYAALETEAMA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEEEEECHHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]