| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386259
Identifier: 119386259
GI number: 119386259
Start: 696400
End: 697605
Strand: Direct
Name: 119386259
Synonym: Pden_3548
Alternate gene names: NA
Gene position: 696400-697605 (Clockwise)
Preceding gene: 119386258
Following gene: 119386260
Centisome position: 40.25
GC content: 68.66
Gene sequence:
>1206_bases GTGGCTCTATTGCGGTCCTGGCTCGAAAGCGCCAATCAGGCGGATTGCCCGTTTCCCCTGAACAACCTGCCCTATGGGGT GTTCTCCGTGTCGGGCGATGCGCCGCGCTGCGGGGTGGCCATCGGCGACATGATCCTGGATCTGGCCGAATGCGAGGCGC GCGGGCTGGTCGACGCGGGCGGCACGTTCGCGCAGCCGCGGCTCAACGATTTCATCGCGCTGGGGCGGGCGAAATGGGAC GAGATCCGCGCCCGGCTGACCGCGCTGCTGGCCGAGGAGGGCGATCGCAGCCTGCCGCTGGTCGCCATGGCCGAGGCACA GCTGCACCTGCCGATCCGGGTCACGGAGTTCACCGATTTCTACGCCTCGAAGAACCATGCCTTCAATGTGGGCGTGCTGT TTCGCGGCCCCGAGAACGCCCTGCCGCCGCAATGGACGCATATGCCCATCGGCTATAACGGGCGGGCGTCCTCGGTCGTG GTCTCGGGCACGCCGATCCGCCGTCCGATGGGCCAGTTGAAGGGCGAGGCCGGGCCGGAATGGGCGCCCTGCCGCAGGCT GGACCTGGAGCTTGAGCTGGGCGCCATCGTTGGCGCGGACAGCGTGATGGGCCAGCGCCTGAGCGTTGAGGAGGCAGAGC AGGCGATCTTCGGCTATGTGCTGCTGAACGACTGGTCGGCGCGCGATGTGCAAGCCTGGGAATACCAGCCGCTGGGCCCG TTCCAGTCCAAGGCGCTTGGCACCACAATCGGTGCATGGATCGTGACCCAGGCGGCGCTGGAGCCGTTTCGCTGCGCGGG TGCCGAGCGGGCGAACCCGCTGCTGCCCTATCTGCACGAGCGGCGGCCGGGGCTTTACGACCTGGAGATCGGCTGGACCA TGAACGGCCAGGTCATGGGGCGGACGAATTACGGCGTCATGTATTACTCCAGCGCCCAGCAACTGGCGCATCACACCAGT TCCGGCTGCCCGATGCGGGTCGGCGACCTGCTGGGCTCGGGCACGATCTCGGGGCCGGAGCGCGAGCAGACCGGGGCGCT GCTGGAGATGACCGGGGGCGGCAAGGTGCCGGTCACGGTCAATGGCGCGCCCCGCACCTTCATCGAGGACGGCGACGAGA TCGGGCTGTTCGCCCAGGCGCGGGGCGAGGGCTATCGCATCGGCTTCGGCCCCTGCACCGGGCAGGTCCTGCCTGCGCTG CCATGA
Upstream 100 bases:
>100_bases TCGACGGAACGCCAGGCGTCAAGTGAGGCCCCAAGGTCGAAGGCCGAGGGCCGAGGGCCGAGAGCCGGGGATATTTGCAC AAGAAAGAAGGAGGCCGGAT
Downstream 100 bases:
>100_bases CGGTCGTGCTGCACGACTACTGGCGATCCTCCGCATCCTACCGGGTGCGGATCGCGCTGGCGCTGAAGGGTATTGCCTAC GACCGGGTGGCGGTGGATCT
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MALLRSWLESANQADCPFPLNNLPYGVFSVSGDAPRCGVAIGDMILDLAECEARGLVDAGGTFAQPRLNDFIALGRAKWD EIRARLTALLAEEGDRSLPLVAMAEAQLHLPIRVTEFTDFYASKNHAFNVGVLFRGPENALPPQWTHMPIGYNGRASSVV VSGTPIRRPMGQLKGEAGPEWAPCRRLDLELELGAIVGADSVMGQRLSVEEAEQAIFGYVLLNDWSARDVQAWEYQPLGP FQSKALGTTIGAWIVTQAALEPFRCAGAERANPLLPYLHERRPGLYDLEIGWTMNGQVMGRTNYGVMYYSSAQQLAHHTS SGCPMRVGDLLGSGTISGPEREQTGALLEMTGGGKVPVTVNGAPRTFIEDGDEIGLFAQARGEGYRIGFGPCTGQVLPAL P
Sequences:
>Translated_401_residues MALLRSWLESANQADCPFPLNNLPYGVFSVSGDAPRCGVAIGDMILDLAECEARGLVDAGGTFAQPRLNDFIALGRAKWD EIRARLTALLAEEGDRSLPLVAMAEAQLHLPIRVTEFTDFYASKNHAFNVGVLFRGPENALPPQWTHMPIGYNGRASSVV VSGTPIRRPMGQLKGEAGPEWAPCRRLDLELELGAIVGADSVMGQRLSVEEAEQAIFGYVLLNDWSARDVQAWEYQPLGP FQSKALGTTIGAWIVTQAALEPFRCAGAERANPLLPYLHERRPGLYDLEIGWTMNGQVMGRTNYGVMYYSSAQQLAHHTS SGCPMRVGDLLGSGTISGPEREQTGALLEMTGGGKVPVTVNGAPRTFIEDGDEIGLFAQARGEGYRIGFGPCTGQVLPAL P >Mature_400_residues ALLRSWLESANQADCPFPLNNLPYGVFSVSGDAPRCGVAIGDMILDLAECEARGLVDAGGTFAQPRLNDFIALGRAKWDE IRARLTALLAEEGDRSLPLVAMAEAQLHLPIRVTEFTDFYASKNHAFNVGVLFRGPENALPPQWTHMPIGYNGRASSVVV SGTPIRRPMGQLKGEAGPEWAPCRRLDLELELGAIVGADSVMGQRLSVEEAEQAIFGYVLLNDWSARDVQAWEYQPLGPF QSKALGTTIGAWIVTQAALEPFRCAGAERANPLLPYLHERRPGLYDLEIGWTMNGQVMGRTNYGVMYYSSAQQLAHHTSS GCPMRVGDLLGSGTISGPEREQTGALLEMTGGGKVPVTVNGAPRTFIEDGDEIGLFAQARGEGYRIGFGPCTGQVLPALP
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=408, Percent_Identity=46.8137254901961, Blast_Score=373, Evalue=1e-103, Organism=Caenorhabditis elegans, GI17568863, Length=419, Percent_Identity=44.8687350835322, Blast_Score=351, Evalue=3e-97, Organism=Drosophila melanogaster, GI24657182, Length=401, Percent_Identity=42.3940149625935, Blast_Score=334, Evalue=6e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 43301; Mature: 43170
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLRSWLESANQADCPFPLNNLPYGVFSVSGDAPRCGVAIGDMILDLAECEARGLVDAG CHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC GTFAQPRLNDFIALGRAKWDEIRARLTALLAEEGDRSLPLVAMAEAQLHLPIRVTEFTDF CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEEHHHH YASKNHAFNVGVLFRGPENALPPQWTHMPIGYNGRASSVVVSGTPIRRPMGQLKGEAGPE HCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCHHHHCCCCCCC WAPCRRLDLELELGAIVGADSVMGQRLSVEEAEQAIFGYVLLNDWSARDVQAWEYQPLGP CCCCEEEEEEEEECEEECCHHHHCCCCCHHHHHHHHEEEEEEECCCCCCCCCEECCCCCC FQSKALGTTIGAWIVTQAALEPFRCAGAERANPLLPYLHERRPGLYDLEIGWTMNGQVMG HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHCCCCEEEEEECEEECCEEEE RTNYGVMYYSSAQQLAHHTSSGCPMRVGDLLGSGTISGPEREQTGALLEMTGGGKVPVTV ECCCCEEEECCHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEE NGAPRTFIEDGDEIGLFAQARGEGYRIGFGPCTGQVLPALP CCCCCHHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure ALLRSWLESANQADCPFPLNNLPYGVFSVSGDAPRCGVAIGDMILDLAECEARGLVDAG HHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC GTFAQPRLNDFIALGRAKWDEIRARLTALLAEEGDRSLPLVAMAEAQLHLPIRVTEFTDF CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEEHHHH YASKNHAFNVGVLFRGPENALPPQWTHMPIGYNGRASSVVVSGTPIRRPMGQLKGEAGPE HCCCCCEEEEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCHHHHCCCCCCC WAPCRRLDLELELGAIVGADSVMGQRLSVEEAEQAIFGYVLLNDWSARDVQAWEYQPLGP CCCCEEEEEEEEECEEECCHHHHCCCCCHHHHHHHHEEEEEEECCCCCCCCCEECCCCCC FQSKALGTTIGAWIVTQAALEPFRCAGAERANPLLPYLHERRPGLYDLEIGWTMNGQVMG HHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHCCCCEEEEEECEEECCEEEE RTNYGVMYYSSAQQLAHHTSSGCPMRVGDLLGSGTISGPEREQTGALLEMTGGGKVPVTV ECCCCEEEECCHHHHHHHCCCCCCEEHHHHHCCCCCCCCCCCCCCCEEEECCCCEEEEEE NGAPRTFIEDGDEIGLFAQARGEGYRIGFGPCTGQVLPALP CCCCCHHHCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA