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The map label for this gene is ycjP [C]

Identifier: 119386118

GI number: 119386118

Start: 550613

End: 551482

Strand: Direct

Name: ycjP [C]

Synonym: Pden_3406

Alternate gene names: 119386118

Gene position: 550613-551482 (Clockwise)

Preceding gene: 119386117

Following gene: 119386119

Centisome position: 31.83

GC content: 61.61

Gene sequence:

>870_bases
ATGACAAGTAAGGCCGTGACCAGTAACACCATGCTGCGTTGGGGCCTTTATGCGGTCCTGATCCTGTTCGCGCTGTTCTA
CCTGATGCCGCTGTTCGTGATGCTGACCACATCGCTGAAAAGCCTTGAGGAAATCCGCACCGGCAGCCTCTTGTCGCTGC
CGCGCGAACTGACATTCGCCCCCTGGGCCGAGGCCTGGTCCAGCGCCTGCGCGGGCACGCAATGCCAGGGGCTGCGGCCG
TTCTTCTGGAACTCGGTGCTGATGGCGGTGCCTGCGGTCGCGATCTCGACCATCGTCGGCGCGCTGAACGGCTATGTCTT
TGCGCAATGGCGCTTCAGGGGTGCGAACCTGTTCTTCGCGGCGATCCTGTTCGGCTGCTTCATCCCGTTTCAGGTCGTGC
TCTTGCCGATGGCGCAGATGCTGGGGCTGATGGGCATCGCGGGGACGATTCCGGGGCTGATCTTCGTCCATGTGATCTAT
GGGATCGGCTTCACCACGCTGTTCTTCCGCAATTACTACGTCACCATCCCGCAGGAACTGGTGCGCGCGGCCAAGGTGGA
CGGGGCGGGGTTCTTTCGGATCTTCTTTGCGATCTTCCTGCCCCTGTCGCTGCCGATCATCACCGTTTCGGTCATCTGGC
AGTTCACGCAGATATGGAACGACTTCCTGTTCGGCGTCAGCTTCAGCGGGCCGGGCAGCCAGCCGGTCACGGTCGCGCTG
AACAACATCGTCAACTCCACCACCGGCGTGAAAGCCTACAACGTGGACATGGCCGCCGCGATCATCGCGGCAGCGCCCAC
GTTGCTGGTCTATGTCATCGCCGGCAAATACTTCATCCGCGGCCTGACCGCCGGCAGCGTGAAAGGATAA

Upstream 100 bases:

>100_bases
CGCGGCGATCTGGGTCAGGCGGCGGCAAGCGCGATGGTCATGATGATGGTGATCTTCGCCATCGTCGTTCCCTATCTCTA
TAGCGAATTGAGGCCCCGCC

Downstream 100 bases:

>100_bases
GCCATGCCGATCCTCGAAATCGACCATCTGCAGAAAGCCTATGGCGACACGCATATCCTGCATGACATCAACATCAGCAT
AGAGCCGGGCGATTTCCTGG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTSKAVTSNTMLRWGLYAVLILFALFYLMPLFVMLTTSLKSLEEIRTGSLLSLPRELTFAPWAEAWSSACAGTQCQGLRP
FFWNSVLMAVPAVAISTIVGALNGYVFAQWRFRGANLFFAAILFGCFIPFQVVLLPMAQMLGLMGIAGTIPGLIFVHVIY
GIGFTTLFFRNYYVTIPQELVRAAKVDGAGFFRIFFAIFLPLSLPIITVSVIWQFTQIWNDFLFGVSFSGPGSQPVTVAL
NNIVNSTTGVKAYNVDMAAAIIAAAPTLLVYVIAGKYFIRGLTAGSVKG

Sequences:

>Translated_289_residues
MTSKAVTSNTMLRWGLYAVLILFALFYLMPLFVMLTTSLKSLEEIRTGSLLSLPRELTFAPWAEAWSSACAGTQCQGLRP
FFWNSVLMAVPAVAISTIVGALNGYVFAQWRFRGANLFFAAILFGCFIPFQVVLLPMAQMLGLMGIAGTIPGLIFVHVIY
GIGFTTLFFRNYYVTIPQELVRAAKVDGAGFFRIFFAIFLPLSLPIITVSVIWQFTQIWNDFLFGVSFSGPGSQPVTVAL
NNIVNSTTGVKAYNVDMAAAIIAAAPTLLVYVIAGKYFIRGLTAGSVKG
>Mature_288_residues
TSKAVTSNTMLRWGLYAVLILFALFYLMPLFVMLTTSLKSLEEIRTGSLLSLPRELTFAPWAEAWSSACAGTQCQGLRPF
FWNSVLMAVPAVAISTIVGALNGYVFAQWRFRGANLFFAAILFGCFIPFQVVLLPMAQMLGLMGIAGTIPGLIFVHVIYG
IGFTTLFFRNYYVTIPQELVRAAKVDGAGFFRIFFAIFLPLSLPIITVSVIWQFTQIWNDFLFGVSFSGPGSQPVTVALN
NIVNSTTGVKAYNVDMAAAIIAAAPTLLVYVIAGKYFIRGLTAGSVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=288, Percent_Identity=28.4722222222222, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1789860, Length=271, Percent_Identity=23.6162361623616, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790464, Length=289, Percent_Identity=28.0276816608997, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31541; Mature: 31410

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TSKAVTSNTMLRWGLYAVLILFALFYLMPLFVMLTTSLKSLEEIRTGSLLSLPRELTFA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHCCCC
PWAEAWSSACAGTQCQGLRPFFWNSVLMAVPAVAISTIVGALNGYVFAQWRFRGANLFFA
CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHH
AILFGCFIPFQVVLLPMAQMLGLMGIAGTIPGLIFVHVIYGIGFTTLFFRNYYVTIPQEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHH
VRAAKVDGAGFFRIFFAIFLPLSLPIITVSVIWQFTQIWNDFLFGVSFSGPGSQPVTVAL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
NNIVNSTTGVKAYNVDMAAAIIAAAPTLLVYVIAGKYFIRGLTAGSVKG
HHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]